RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 JMJD1CQ15652 2540 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 IGHV1OR15-1A0A075B7D0 117 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 TRBV27A0A0K0K1C4 114 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 TRBV10-2A0A0K0K1G8 114 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 P0DMU3 169 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 FAM231AP0DMU4 169 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 FAM231CP0DMU5 169 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 TMEM86BQ8N661 226 aa5.18□□□□□ -1.58
SRGAP3-213ENST00000618999 IGHV3-73A0A0B4J1V6 119 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 TMEM223A0PJW6 202 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 PSMB8P28062 276 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 SPINK13Q1W4C9 94 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 SPANXA1Q9NS26 97 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 WNK1Q9H4A3 2382 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 C20orf203Q8NBC4 194 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 COPS9Q8WXC6 57 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 LGALS9O00182 355 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 TSHBP01222 138 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 ZNF22P17026 224 aaPredicted RBP5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 NDUFV3P56181 108 aaKnown RBP5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 NSUN5P1Q3KNT7 163 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 Q6ZSV7 163 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 ESM1Q9NQ30 184 aa5.17□□□□□ -1.58
SRGAP3-213ENST00000618999 TRAV8-3A0A0A6YYJ7 113 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 TRBV6-5A0A0K0K1A5 114 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 CFHR3Q02985 330 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 KLK9Q2XQG4 91 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 ICOSQ9Y6W8 199 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 TEX49A0A1B0GTD5 131 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 INAFM1C9JVW0 142 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 TMEM263Q8WUH6 116 aaKnown RBP5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 MDFICQ9P1T7 246 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 A0A0J9YXY3 114 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 IGHV3-30-3P0DP02 117 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 SYNJ2BPP57105 145 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 DUX3Q96PT4 197 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 KLLNB2CW77 178 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 NXPH4O95158 308 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 BRI3O95415 125 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 DEFB136Q30KP8 78 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 MEIG1Q5JSS6 88 aa5.16□□□□□ -1.58
SRGAP3-213ENST00000618999 C2CD3Q4AC94 2353 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 H3BT86 120 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 M0QY20 66 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 SOCS3O14543 225 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 RNASE13Q5GAN3 156 aaKnown RBP5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 SBSPONQ8IVN8 264 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 TMEM101Q96IK0 257 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 FAM110AQ9BQ89 295 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 ZNF580Q9UK33 172 aa5.15□□□□□ -1.58
SRGAP3-213ENST00000618999 TRAV4A0A0B4J268 109 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 IGHV3-16A0A0C4DH30 117 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 TRBV30A0A0K0K1B3 111 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 UBE2E2Q96LR5 201 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 RETNQ9HD89 108 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 F8P00451 2351 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 FN1P02751 2386 aaKnown RBP5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 IGLV4-3A0A075B6K6 122 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 KIF25-AS1Q9Y6Z4 181 aa5.15□□□□□ -1.59
SRGAP3-213ENST00000618999 C18orf65Q6ZTR6 163 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 C3orf56Q8N813 242 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 K7EMT4 169 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 HOXD3P31249 432 aaPredicted RBP5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 NF1P21359 2839 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 ZFHX3Q15911 3703 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 IGHV1-58A0A0C4DH39 117 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 KNCNA6PVL3 124 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 LINC00315P59091 139 aa5.14□□□□□ -1.59
SRGAP3-213ENST00000618999 ZNF469Q96JG9 3925 aaPredicted RBP5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 A0A0J9YX75 114 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 HILS1P60008 231 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 OR13C6PQ8NH95 151 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 CLEC2BQ92478 149 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 SORL1Q92673 2214 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 MIAQ16674 131 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 APRG1Q8IVJ8 170 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 Q8N2B8 174 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 POM121L12Q8N7R1 296 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 SLURP1P55000 103 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 LINC01006Q8NI28 216 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 C9orf85Q96MD7 179 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 ODF3Q96PU9 254 aa5.13□□□□□ -1.59
SRGAP3-213ENST00000618999 Q6Q795 121 aa5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 FAM19A4Q96LR4 140 aa5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 CEMP1Q6PRD7 247 aaPredicted RBP5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 LINC01587Q99440 93 aa5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 IGKV2-29A2NJV5 120 aaPredicted RBP5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 ZNF625Q96I27 306 aaPredicted RBP5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 HIVEP1P15822 2718 aa5.12□□□□□ -1.59
SRGAP3-213ENST00000618999 DYNLRB2Q8TF09 96 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 BAHCC1Q9P281 2608 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 TRAV25A0A0B4J276 109 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 CCDC179H3BU77 68 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 CRLF1O75462 422 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 DNAL4O96015 105 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 PYGO1Q9Y3Y4 419 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 IGHV3-38A0A0C4DH36 116 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 ACYP1P07311 99 aa5.11□□□□□ -1.59
SRGAP3-213ENST00000618999 PRIMA1Q86XR5 153 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms