RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 DPH3Q96FX2 82 aa10.9□□□□□ -0.67
SRRT-217ENST00000618411 ASH1LQ9NR48 2969 aaKnown RBP10.89□□□□□ -0.67
SRRT-217ENST00000618411 TRAV13-2A0A0B4J235 113 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 RBMY1A1P0DJD3 496 aaKnown RBP10.89□□□□□ -0.67
SRRT-217ENST00000618411 RBMY1CP0DJD4 496 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 KLRB1Q12918 225 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 RBMY1FQ15415 496 aaKnown RBP10.89□□□□□ -0.67
SRRT-217ENST00000618411 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 Q9HAA7 133 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 HTN1P15515 57 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 CFHR3Q02985 330 aa10.89□□□□□ -0.67
SRRT-217ENST00000618411 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
SRRT-217ENST00000618411 PTPRZ1P23471 2315 aaPredicted RBP10.88□□□□□ -0.67
SRRT-217ENST00000618411 TRAV13-1A0A0B4J241 112 aa10.88□□□□□ -0.67
SRRT-217ENST00000618411 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
SRRT-217ENST00000618411 IGHV3-38A0A0C4DH36 116 aa10.88□□□□□ -0.67
SRRT-217ENST00000618411 ADORA2A-AS1P86434 159 aa10.88□□□□□ -0.67
SRRT-217ENST00000618411 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
SRRT-217ENST00000618411 SVEP1Q4LDE5 3571 aa10.88□□□□□ -0.67
SRRT-217ENST00000618411 A0A1W2PPR1 153 aa10.87□□□□□ -0.67
SRRT-217ENST00000618411 H3BUX3 64 aa10.87□□□□□ -0.67
SRRT-217ENST00000618411 OBSCN-AS1Q96MR7 158 aa10.87□□□□□ -0.67
SRRT-217ENST00000618411 SORL1Q92673 2214 aa10.86□□□□□ -0.67
SRRT-217ENST00000618411 CRPP02741 224 aa10.85□□□□□ -0.67
SRRT-217ENST00000618411 IGKV3D-7A0A0C4DH55 119 aa10.85□□□□□ -0.67
SRRT-217ENST00000618411 HOXD3P31249 432 aaPredicted RBP10.84□□□□□ -0.67
SRRT-217ENST00000618411 KIR2DL5BQ8NHK3 375 aa10.84□□□□□ -0.67
SRRT-217ENST00000618411 LINC00846Q9NV44 126 aa10.84□□□□□ -0.67
SRRT-217ENST00000618411 C14orf132Q9NPU4 83 aa10.84□□□□□ -0.67
SRRT-217ENST00000618411 TRAV25A0A0B4J276 109 aa10.83□□□□□ -0.68
SRRT-217ENST00000618411 USP17L23D6RBM5 183 aa10.83□□□□□ -0.68
SRRT-217ENST00000618411 F5H768 121 aa10.83□□□□□ -0.68
SRRT-217ENST00000618411 PSMB8P28062 276 aa10.83□□□□□ -0.68
SRRT-217ENST00000618411 SPTAN1Q13813 2472 aaKnown RBP10.83□□□□□ -0.68
SRRT-217ENST00000618411 H0YGX0 51 aa10.83□□□□□ -0.68
SRRT-217ENST00000618411 LINC01561Q8N1V8 128 aa10.83□□□□□ -0.68
SRRT-217ENST00000618411 LINC00337Q8N6G1 96 aa10.82□□□□□ -0.68
SRRT-217ENST00000618411 PIMREGQ9BSJ6 248 aa10.82□□□□□ -0.68
SRRT-217ENST00000618411 A8MTW9 85 aa10.82□□□□□ -0.68
SRRT-217ENST00000618411 C9orf129Q5T035 196 aaKnown RBP10.82□□□□□ -0.68
SRRT-217ENST00000618411 RELNP78509 3460 aa10.82□□□□□ -0.68
SRRT-217ENST00000618411 RS1O15537 224 aa10.81□□□□□ -0.68
SRRT-217ENST00000618411 IGHV4-38-2P0DP08 117 aa10.81□□□□□ -0.68
SRRT-217ENST00000618411 PRM2P04554 102 aa10.81□□□□□ -0.68
SRRT-217ENST00000618411 A0A087WYN8 130 aa10.8□□□□□ -0.68
SRRT-217ENST00000618411 A0A087WVE0 104 aa10.8□□□□□ -0.68
SRRT-217ENST00000618411 DSCR8Q96T75 97 aa10.8□□□□□ -0.68
SRRT-217ENST00000618411 SPTA1P02549 2419 aa10.8□□□□□ -0.68
SRRT-217ENST00000618411 IGKV2-28A0A075B6P5 120 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 IGKV2D-28P01615 120 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 SYNJ2BPP57105 145 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 SMIM11BQ8TCY0 68 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 SND1-IT1Q9HBX3 110 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 K7ENP7 123 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 OXTP01178 125 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 C11orf72Q8NBR9 251 aa10.79□□□□□ -0.68
SRRT-217ENST00000618411 ABCA2Q9BZC7 2435 aa10.78□□□□□ -0.68
SRRT-217ENST00000618411 TMEM89A2RUT3 159 aa10.78□□□□□ -0.68
SRRT-217ENST00000618411 MIR7-3HGQ8N6C7 128 aa10.77□□□□□ -0.69
SRRT-217ENST00000618411 ZNF292O60281 2723 aa10.77□□□□□ -0.69
SRRT-217ENST00000618411 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.69
SRRT-217ENST00000618411 NBASA2RRP1 2371 aa10.77□□□□□ -0.69
SRRT-217ENST00000618411 DEFB131AP59861 70 aa10.76□□□□□ -0.69
SRRT-217ENST00000618411 RBMY1BA6NDE4 496 aaKnown RBP10.76□□□□□ -0.69
SRRT-217ENST00000618411 RBMY1EA6NEQ0 496 aaKnown RBP10.76□□□□□ -0.69
SRRT-217ENST00000618411 RBMY1DP0C7P1 496 aaKnown RBP10.76□□□□□ -0.69
SRRT-217ENST00000618411 Q96MF0 132 aa10.76□□□□□ -0.69
SRRT-217ENST00000618411 NDUFC2-KCTD14E9PQ53 114 aa10.75□□□□□ -0.69
SRRT-217ENST00000618411 AKAP6Q13023 2319 aa10.75□□□□□ -0.69
SRRT-217ENST00000618411 LECT2O14960 151 aa10.75□□□□□ -0.69
SRRT-217ENST00000618411 S100A7L2Q5SY68 101 aa10.75□□□□□ -0.69
SRRT-217ENST00000618411 Q5XG85 94 aa10.75□□□□□ -0.69
SRRT-217ENST00000618411 C4orf26Q17RF5 130 aa10.74□□□□□ -0.69
SRRT-217ENST00000618411 NCR3O14931 201 aa10.74□□□□□ -0.69
SRRT-217ENST00000618411 NDUFC2O95298 119 aa10.74□□□□□ -0.69
SRRT-217ENST00000618411 C10orf99Q6UWK7 81 aa10.74□□□□□ -0.69
SRRT-217ENST00000618411 RIF1Q5UIP0 2472 aaKnown RBP10.74□□□□□ -0.69
SRRT-217ENST00000618411 ZFHX3Q15911 3703 aa10.73□□□□□ -0.69
SRRT-217ENST00000618411 CCKP06307 115 aa10.73□□□□□ -0.69
SRRT-217ENST00000618411 NTM-AS1Q6ZSK4 140 aa10.73□□□□□ -0.69
SRRT-217ENST00000618411 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
SRRT-217ENST00000618411 RPL36AP83881 106 aaKnown RBP10.72□□□□□ -0.69
SRRT-217ENST00000618411 ATP5EP2Q5VTU8 51 aa10.72□□□□□ -0.69
SRRT-217ENST00000618411 RPL36ALQ969Q0 106 aaKnown RBP10.72□□□□□ -0.69
SRRT-217ENST00000618411 PTPRQQ9UMZ3 2332 aa10.72□□□□□ -0.69
SRRT-217ENST00000618411 IGHV4-61A0A0C4DH41 118 aa10.72□□□□□ -0.69
SRRT-217ENST00000618411 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
SRRT-217ENST00000618411 CCL18P55774 89 aa10.72□□□□□ -0.69
SRRT-217ENST00000618411 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.72□□□□□ -0.696e-7■■■□□ 19
SRRT-217ENST00000618411 FHL2Q14192 279 aa10.71□□□□□ -0.69
SRRT-217ENST00000618411 LINC00158P58513 81 aa10.71□□□□□ -0.69
SRRT-217ENST00000618411 ORMDL1Q9P0S3 153 aa10.71□□□□□ -0.69
SRRT-217ENST00000618411 HRCT1Q6UXD1 115 aa10.7□□□□□ -0.7
SRRT-217ENST00000618411 CREBBPQ92793 2442 aa10.7□□□□□ -0.7
SRRT-217ENST00000618411 GHRHP01286 108 aa10.69□□□□□ -0.7
SRRT-217ENST00000618411 CELSR1Q9NYQ6 3014 aa10.69□□□□□ -0.7
SRRT-217ENST00000618411 INSP01308 110 aa10.69□□□□□ -0.7
SRRT-217ENST00000618411 SS18Q15532 418 aa10.69□□□□□ -0.7
SRRT-217ENST00000618411 TTC28Q96AY4 2481 aa10.69□□□□□ -0.7
SRRT-217ENST00000618411 IBA57-AS1B1ANH7 110 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms