RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 M0QXV9 152 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 CXCL1P09341 107 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 IGLV2-14P01704 120 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 MRPL35Q9NZE8 188 aaKnown RBP7.91□□□□□ -1.14
POLR2A-209ENST00000617998 WFDC9Q8NEX5 89 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 IGKV2-28A0A075B6P5 120 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 H3BUT2 72 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 IGKV2D-28P01615 120 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 SPCS1Q9Y6A9 102 aa7.91□□□□□ -1.14
POLR2A-209ENST00000617998 LGALS9CQ6DKI2 356 aa7.9□□□□□ -1.14
POLR2A-209ENST00000617998 K7EP13 123 aa7.9□□□□□ -1.14
POLR2A-209ENST00000617998 IL15RAQ13261 267 aa7.9□□□□□ -1.14
POLR2A-209ENST00000617998 NAA38Q9BRA0 125 aaKnown RBP7.9□□□□□ -1.15
POLR2A-209ENST00000617998 WDR87Q6ZQQ6 2873 aa7.9□□□□□ -1.15
POLR2A-209ENST00000617998 C12orf74Q32Q52 190 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 ANAPC13Q9BS18 74 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 UBL5Q9BZL1 73 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 BEAN1Q3B7T3 259 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 LYPD5Q6UWN5 251 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 FAM167A-AS1Q96KT0 104 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 LINC00467Q9BRT7 94 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 SMIM27A0A1W2PRY6 76 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 KIR3DS1Q14943 382 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 ZNF726P1Q15940 193 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 ORMDL1Q9P0S3 153 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 PRSS47A8MTI9 375 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 HSD52Q0P140 79 aa7.89□□□□□ -1.15
POLR2A-209ENST00000617998 WFDC10BQ8IUB3 73 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 C20orf203Q8NBC4 194 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 RPL37AP8A6NKH3 93 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 MIR7-3HGQ8N6C7 128 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 H3BQ85 93 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 CARHSP1Q9Y2V2 147 aaKnown RBP7.88□□□□□ -1.15
POLR2A-209ENST00000617998 MTURNQ8N3F0 131 aa7.88□□□□□ -1.15
POLR2A-209ENST00000617998 V9GYV3 84 aa7.87□□□□□ -1.15
POLR2A-209ENST00000617998 COX6A2Q02221 97 aa7.87□□□□□ -1.15
POLR2A-209ENST00000617998 ANKRD29Q8N6D5 301 aa7.87□□□□□ -1.15
POLR2A-209ENST00000617998 CHKB-CPT1BH3BT56 60 aa7.87□□□□□ -1.15
POLR2A-209ENST00000617998 RBM3P98179 157 aaKnown RBP7.87□□□□□ -1.15
POLR2A-209ENST00000617998 PRR4Q16378 134 aa7.87□□□□□ -1.15
POLR2A-209ENST00000617998 SRSF3P84103 164 aaKnown RBP7.87□□□□□ -1.15
POLR2A-209ENST00000617998 CELA1Q9UNI1 258 aa7.87□□□□□ -1.15
POLR2A-209ENST00000617998 RTL8CO15255 209 aa7.86□□□□□ -1.15
POLR2A-209ENST00000617998 RPL37AP61513 92 aaKnown RBP7.86□□□□□ -1.15
POLR2A-209ENST00000617998 SS18L2Q9UHA2 77 aa7.86□□□□□ -1.15
POLR2A-209ENST00000617998 BAHCC1Q9P281 2608 aa7.86□□□□□ -1.15
POLR2A-209ENST00000617998 Q6Q795 121 aa7.86□□□□□ -1.15
POLR2A-209ENST00000617998 LINC00315P59091 139 aa7.85□□□□□ -1.15
POLR2A-209ENST00000617998 TINCRA0A1B0GVN0 87 aa7.85□□□□□ -1.15
POLR2A-209ENST00000617998 NDUFS6O75380 124 aaKnown RBP7.85□□□□□ -1.15
POLR2A-209ENST00000617998 TRAV12-1A0A0B4J245 112 aa7.84□□□□□ -1.15
POLR2A-209ENST00000617998 EPM2AB3EWF7 344 aa7.84□□□□□ -1.15
POLR2A-209ENST00000617998 TRBV24-1A0A075B6N3 115 aa7.83□□□□□ -1.16
POLR2A-209ENST00000617998 MGAM2Q2M2H8 2515 aa7.83□□□□□ -1.16
POLR2A-209ENST00000617998 LOC105371267A0A1B0GV96 52 aa7.83□□□□□ -1.16
POLR2A-209ENST00000617998 IFITM1P13164 125 aa7.83□□□□□ -1.16
POLR2A-209ENST00000617998 LINC00959A0A1B0GUT2 108 aa7.83□□□□□ -1.16
POLR2A-209ENST00000617998 ZNF80P51504 273 aaPredicted RBP7.83□□□□□ -1.16
POLR2A-209ENST00000617998 KRTAP10-11P60412 298 aa7.83□□□□□ -1.16
POLR2A-209ENST00000617998 NREPQ16612 68 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 DAND5Q8N907 189 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 FHL2Q14192 279 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 CASC2Q6XLA1 102 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 C18orf32Q8TCD1 76 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 NTN5Q8WTR8 489 aaPredicted RBP7.82□□□□□ -1.16
POLR2A-209ENST00000617998 H0YGX0 51 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 CTRLP40313 264 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 Q6ZSN1 163 aa7.82□□□□□ -1.16
POLR2A-209ENST00000617998 KLLNB2CW77 178 aa7.81□□□□□ -1.16
POLR2A-209ENST00000617998 IGKV4-1P06312 121 aa7.81□□□□□ -1.16
POLR2A-209ENST00000617998 SETXQ7Z333 2677 aaKnown RBP7.8□□□□□ -1.16
POLR2A-209ENST00000617998 M0R378 163 aa7.8□□□□□ -1.16
POLR2A-209ENST00000617998 CPAMD8Q8IZJ3 1885 aa7.8□□□□□ -1.16
POLR2A-209ENST00000617998 ESRGQ1W209 222 aa7.8□□□□□ -1.16
POLR2A-209ENST00000617998 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
POLR2A-209ENST00000617998 TANC2Q9HCD6 1990 aa7.79□□□□□ -1.16
POLR2A-209ENST00000617998 C9JAW5 83 aa7.79□□□□□ -1.16
POLR2A-209ENST00000617998 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
POLR2A-209ENST00000617998 BRWD1-AS2P59051 145 aa7.79□□□□□ -1.16
POLR2A-209ENST00000617998 RNASE8Q8TDE3 154 aaKnown RBP7.79□□□□□ -1.16
POLR2A-209ENST00000617998 K7EN84 100 aa7.78□□□□□ -1.16
POLR2A-209ENST00000617998 M0QY20 66 aa7.78□□□□□ -1.16
POLR2A-209ENST00000617998 LIMD2Q9BT23 127 aa7.78□□□□□ -1.16
POLR2A-209ENST00000617998 TOMM6Q96B49 74 aa7.78□□□□□ -1.16
POLR2A-209ENST00000617998 C3orf79P0CE67 100 aa7.78□□□□□ -1.16
POLR2A-209ENST00000617998 COX6B2Q6YFQ2 88 aa7.78□□□□□ -1.16
POLR2A-209ENST00000617998 DHRS4-AS1Q9P1J3 65 aa7.77□□□□□ -1.16
POLR2A-209ENST00000617998 PLXNB1O43157 2135 aa7.77□□□□□ -1.17
POLR2A-209ENST00000617998 SMR3BP02814 79 aaPredicted RBP7.77□□□□□ -1.17
POLR2A-209ENST00000617998 CYSRT1A8MQ03 144 aa7.77□□□□□ -1.17
POLR2A-209ENST00000617998 Q6ZPA2 131 aa7.77□□□□□ -1.17
POLR2A-209ENST00000617998 TRBV10-2A0A0K0K1G8 114 aa7.77□□□□□ -1.17
POLR2A-209ENST00000617998 A4D1N5 150 aa7.76□□□□□ -1.17
POLR2A-209ENST00000617998 PRO1854Q9UHT4 67 aa7.76□□□□□ -1.17
POLR2A-209ENST00000617998 MAST4O15021 2626 aa7.76□□□□□ -1.17
POLR2A-209ENST00000617998 TRBV20-1A0A075B6N2 111 aa7.76□□□□□ -1.17
POLR2A-209ENST00000617998 TRBV30A0A0K0K1B3 111 aa7.76□□□□□ -1.17
POLR2A-209ENST00000617998 EGFEM1PQ0D2K5 195 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms