RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 HIST1H2BDP58876 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BCP62807 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 REG3AQ06141 175 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST2H2BEQ16778 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 ZNF664Q8N3J9 261 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BHQ93079 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 TOMM6Q96B49 74 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 CHCHD1Q96BP2 118 aaKnown RBP10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BNQ99877 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 HIST1H2BMQ99879 126 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 OPRPNQ99935 248 aaPredicted RBP10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 PRR34Q9NV39 138 aa10.48□□□□□ -0.73
PCDHGC3-204ENST00000617222 C1orf196B1AJZ1 125 aa10.47□□□□□ -0.73
PCDHGC3-204ENST00000617222 PMCHL1Q16048 86 aa10.47□□□□□ -0.73
PCDHGC3-204ENST00000617222 RNASE13Q5GAN3 156 aaKnown RBP10.47□□□□□ -0.73
PCDHGC3-204ENST00000617222 PYGO1Q9Y3Y4 419 aa10.47□□□□□ -0.73
PCDHGC3-204ENST00000617222 RYR2Q92736 4967 aa10.47□□□□□ -0.73
PCDHGC3-204ENST00000617222 SERF1AO75920 110 aa10.46□□□□□ -0.73
PCDHGC3-204ENST00000617222 Q6ZUT4 128 aa10.46□□□□□ -0.73
PCDHGC3-204ENST00000617222 NFE4Q86UQ8 179 aa10.46□□□□□ -0.73
PCDHGC3-204ENST00000617222 FAM104AQ969W3 186 aa10.46□□□□□ -0.73
PCDHGC3-204ENST00000617222 A0A096LNJ9 63 aa10.45□□□□□ -0.74
PCDHGC3-204ENST00000617222 IGIPA6NJ69 53 aa10.45□□□□□ -0.74
PCDHGC3-204ENST00000617222 MRPS36P82909 103 aaKnown RBP10.45□□□□□ -0.74
PCDHGC3-204ENST00000617222 MIAQ16674 131 aa10.45□□□□□ -0.74
PCDHGC3-204ENST00000617222 SCGB3A1Q96QR1 104 aa10.45□□□□□ -0.74
PCDHGC3-204ENST00000617222 IGLV10-54A0A075B6I4 117 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 IGLV4-3A0A075B6K6 122 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 RTL8CO15255 209 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 NUPR1O60356 82 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 HSBP1O75506 76 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 HBDP02042 147 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 LINC00310P59036 64 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 RMI2Q96E14 147 aa10.44□□□□□ -0.74
PCDHGC3-204ENST00000617222 LINC01549A6NIU2 74 aa10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 Q6ZRN7 208 aaPredicted RBP10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 ERASQ7Z444 233 aa10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 TMEM141Q96I45 108 aa10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 C1orf43Q9BWL3 253 aa10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 TM2D2Q9BX73 214 aa10.43□□□□□ -0.74
PCDHGC3-204ENST00000617222 TRAV8-4A0A0B4J246 113 aa10.42□□□□□ -0.74
PCDHGC3-204ENST00000617222 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
PCDHGC3-204ENST00000617222 TRAV13-1A0A0B4J241 112 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 LINC00959A0A1B0GUT2 108 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 PSCAO43653 123 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 NDUFA6P56556 154 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 PDZD11Q5EBL8 140 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 ZC2HC1BQ5TFG8 222 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 Q6ZN92 141 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 VCX2Q9H322 139 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 COX11Q9Y6N1 276 aa10.41□□□□□ -0.74
PCDHGC3-204ENST00000617222 NPSP0C0P6 89 aa10.4□□□□□ -0.74
PCDHGC3-204ENST00000617222 SS18Q15532 418 aa10.4□□□□□ -0.74
PCDHGC3-204ENST00000617222 CHCHD10Q8WYQ3 142 aaPredicted RBP10.4□□□□□ -0.74
PCDHGC3-204ENST00000617222 IFITM10A6NMD0 228 aa10.39□□□□□ -0.75
PCDHGC3-204ENST00000617222 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
PCDHGC3-204ENST00000617222 KRTAP26-1Q6PEX3 210 aa10.39□□□□□ -0.75
PCDHGC3-204ENST00000617222 TEX43Q6ZNM6 134 aa10.39□□□□□ -0.75
PCDHGC3-204ENST00000617222 AMELXQ99217 191 aa10.39□□□□□ -0.75
PCDHGC3-204ENST00000617222 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
PCDHGC3-204ENST00000617222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.38□□□□□ -0.75
PCDHGC3-204ENST00000617222 CCL25O15444 150 aa10.38□□□□□ -0.75
PCDHGC3-204ENST00000617222 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
PCDHGC3-204ENST00000617222 MAPKAPK5-AS1Q8N8E1 139 aa10.38□□□□□ -0.75
PCDHGC3-204ENST00000617222 PRSS29PA6NIE9 313 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 ATP5LO75964 103 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 XCL1P47992 114 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 TNP2Q05952 138 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 BAALCQ8WXS3 180 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 C2orf88Q9BSF0 95 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 DNAH2Q9P225 4427 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 RYR3Q15413 4870 aa10.37□□□□□ -0.75
PCDHGC3-204ENST00000617222 FABP4P15090 132 aa10.35□□□□□ -0.75
PCDHGC3-204ENST00000617222 PMVKQ15126 192 aa10.35□□□□□ -0.75
PCDHGC3-204ENST00000617222 LINC00336Q6ZUF6 198 aa10.35□□□□□ -0.75
PCDHGC3-204ENST00000617222 CST9LQ9H4G1 147 aa10.35□□□□□ -0.75
PCDHGC3-204ENST00000617222 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
PCDHGC3-204ENST00000617222 LEPROTL1O95214 131 aa10.34□□□□□ -0.75
PCDHGC3-204ENST00000617222 UBE2D1P51668 147 aa10.34□□□□□ -0.75
PCDHGC3-204ENST00000617222 FOXI1Q12951 378 aa10.34□□□□□ -0.75
PCDHGC3-204ENST00000617222 CD164L2Q6UWJ8 174 aa10.34□□□□□ -0.75
PCDHGC3-204ENST00000617222 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
PCDHGC3-204ENST00000617222 A0A087WTM6 91 aa10.33□□□□□ -0.76
PCDHGC3-204ENST00000617222 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
PCDHGC3-204ENST00000617222 LECT2O14960 151 aa10.33□□□□□ -0.76
PCDHGC3-204ENST00000617222 PRSS1P07477 247 aa10.33□□□□□ -0.76
PCDHGC3-204ENST00000617222 LINC00242Q5T6M2 205 aa10.33□□□□□ -0.76
PCDHGC3-204ENST00000617222 DNAH17Q9UFH2 4485 aa10.32□□□□□ -0.76
PCDHGC3-204ENST00000617222 COX6A2Q02221 97 aa10.32□□□□□ -0.76
PCDHGC3-204ENST00000617222 WFDC2Q14508 124 aa10.32□□□□□ -0.76
PCDHGC3-204ENST00000617222 HSPB8Q9UJY1 196 aa10.32□□□□□ -0.76
PCDHGC3-204ENST00000617222 A0A0J9YXV3 536 aa10.31□□□□□ -0.76
PCDHGC3-204ENST00000617222 C5orf38Q86SI9 138 aa10.31□□□□□ -0.76
PCDHGC3-204ENST00000617222 S100A6P06703 90 aa10.3□□□□□ -0.76
PCDHGC3-204ENST00000617222 IGHV3OR16-9A0A0B4J2B5 98 aa10.29□□□□□ -0.76
PCDHGC3-204ENST00000617222 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms