RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 C2orf82Q6UX34 121 aa13.78□□□□□ -0.2
CDK11B-206ENST00000615951 SLC25A29Q8N8R3 303 aa13.78□□□□□ -0.2
CDK11B-206ENST00000615951 RPL39LQ96EH5 51 aaKnown RBP13.78□□□□□ -0.2
CDK11B-206ENST00000615951 DPH3Q96FX2 82 aa13.78□□□□□ -0.2
CDK11B-206ENST00000615951 MAP6D1Q9H9H5 199 aa13.78□□□□□ -0.2
CDK11B-206ENST00000615951 MUC4Q99102 2169 aa13.77□□□□□ -0.2
CDK11B-206ENST00000615951 CD28P10747 220 aa13.77□□□□□ -0.21
CDK11B-206ENST00000615951 HRCT1Q6UXD1 115 aa13.76□□□□□ -0.21
CDK11B-206ENST00000615951 LINC01006Q8NI28 216 aa13.76□□□□□ -0.21
CDK11B-206ENST00000615951 CCL24O00175 119 aa13.76□□□□□ -0.21
CDK11B-206ENST00000615951 CRYGDP07320 174 aa13.76□□□□□ -0.21
CDK11B-206ENST00000615951 TMEM263Q8WUH6 116 aaKnown RBP13.76□□□□□ -0.21
CDK11B-206ENST00000615951 NBPF19A0A087WUL8 3843 aa13.75□□□□□ -0.21
CDK11B-206ENST00000615951 HERVK_113P61574 105 aa13.75□□□□□ -0.21
CDK11B-206ENST00000615951 H3BT86 120 aa13.75□□□□□ -0.21
CDK11B-206ENST00000615951 HILS1P60008 231 aa13.75□□□□□ -0.21
CDK11B-206ENST00000615951 Q5XG85 94 aa13.75□□□□□ -0.21
CDK11B-206ENST00000615951 SUMO4Q6EEV6 95 aa13.74□□□□□ -0.21
CDK11B-206ENST00000615951 TOMM6Q96B49 74 aa13.74□□□□□ -0.21
CDK11B-206ENST00000615951 C2orf48Q96LS8 159 aa13.74□□□□□ -0.21
CDK11B-206ENST00000615951 SCGB3A1Q96QR1 104 aa13.74□□□□□ -0.21
CDK11B-206ENST00000615951 LINC00467Q9BRT7 94 aa13.74□□□□□ -0.21
CDK11B-206ENST00000615951 ZNF256Q9Y2P7 627 aaPredicted RBP13.74□□□□□ -0.21
CDK11B-206ENST00000615951 A0A0B4J2C4 111 aa13.74□□□□□ -0.21
CDK11B-206ENST00000615951 RBMY1BA6NDE4 496 aaKnown RBP13.74□□□□□ -0.21
CDK11B-206ENST00000615951 RBMY1EA6NEQ0 496 aaKnown RBP13.74□□□□□ -0.21
CDK11B-206ENST00000615951 RBMY1DP0C7P1 496 aaKnown RBP13.74□□□□□ -0.21
CDK11B-206ENST00000615951 ZNF22P17026 224 aaPredicted RBP13.74□□□□□ -0.21
CDK11B-206ENST00000615951 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
CDK11B-206ENST00000615951 EIF4EBP3O60516 100 aaPredicted RBP13.73□□□□□ -0.21
CDK11B-206ENST00000615951 TRACP01848 142 aa13.73□□□□□ -0.21
CDK11B-206ENST00000615951 JPT2Q9H910 190 aa13.73□□□□□ -0.21
CDK11B-206ENST00000615951 H7C423 109 aa13.72□□□□□ -0.21
CDK11B-206ENST00000615951 ACYP1P07311 99 aa13.72□□□□□ -0.21
CDK11B-206ENST00000615951 RBMY1A1P0DJD3 496 aaKnown RBP13.72□□□□□ -0.21
CDK11B-206ENST00000615951 RBMY1CP0DJD4 496 aa13.72□□□□□ -0.21
CDK11B-206ENST00000615951 TMEM258P61165 79 aa13.72□□□□□ -0.21
CDK11B-206ENST00000615951 RBMY1FQ15415 496 aaKnown RBP13.72□□□□□ -0.21
CDK11B-206ENST00000615951 H7C2G1 150 aa13.72□□□□□ -0.21
CDK11B-206ENST00000615951 FLNAP21333 2647 aaKnown RBP13.71□□□□□ -0.21
CDK11B-206ENST00000615951 POLR2KP53803 58 aaKnown RBP13.71□□□□□ -0.21
CDK11B-206ENST00000615951 PIK3CD-AS1Q5SR53 167 aa13.71□□□□□ -0.21
CDK11B-206ENST00000615951 A0A087WWL8 130 aa13.71□□□□□ -0.22
CDK11B-206ENST00000615951 TRBV30A0A0K0K1B3 111 aa13.71□□□□□ -0.22
CDK11B-206ENST00000615951 A0A1W2PRX2 142 aa13.71□□□□□ -0.22
CDK11B-206ENST00000615951 VCYO14598 125 aa13.7□□□□□ -0.22
CDK11B-206ENST00000615951 OXTP01178 125 aa13.7□□□□□ -0.22
CDK11B-206ENST00000615951 Q1RN00 199 aa13.7□□□□□ -0.22
CDK11B-206ENST00000615951 HIST2H2BDQ6DRA6 164 aa13.7□□□□□ -0.22
CDK11B-206ENST00000615951 hADV29S1A0JD25 119 aa13.69□□□□□ -0.22
CDK11B-206ENST00000615951 F5H697 171 aa13.69□□□□□ -0.22
CDK11B-206ENST00000615951 LINC00643Q86TS7 51 aa13.69□□□□□ -0.22
CDK11B-206ENST00000615951 C11orf44Q8N8P7 122 aa13.69□□□□□ -0.22
CDK11B-206ENST00000615951 ZNF876PQ49A33 203 aa13.68□□□□□ -0.22
CDK11B-206ENST00000615951 ZNF469Q96JG9 3925 aaPredicted RBP13.68□□□□□ -0.22
CDK11B-206ENST00000615951 TRBV27A0A0K0K1C4 114 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 M0QY20 66 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 CXCL5P42830 114 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 CMC4P56277 68 aaPredicted RBP13.67□□□□□ -0.22
CDK11B-206ENST00000615951 ODF3L2Q3SX64 289 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 C2orf66Q6UXQ4 117 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 INSP01308 110 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 ZNF415Q09FC8 603 aa13.67□□□□□ -0.22
CDK11B-206ENST00000615951 UNC79Q9P2D8 2635 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 CYSRT1A8MQ03 144 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 MALP21145 153 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 PRO0628Q9UI54 55 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
CDK11B-206ENST00000615951 TRIAP1O43715 76 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 FAM74A4Q5TZK3 123 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 C5orf38Q86SI9 138 aa13.66□□□□□ -0.22
CDK11B-206ENST00000615951 CCDC168Q8NDH2 2452 aa13.65□□□□□ -0.22
CDK11B-206ENST00000615951 SDHAF1A6NFY7 115 aa13.65□□□□□ -0.22
CDK11B-206ENST00000615951 TLN2Q9Y4G6 2542 aa13.65□□□□□ -0.22
CDK11B-206ENST00000615951 PROK1P58294 105 aa13.64□□□□□ -0.23
CDK11B-206ENST00000615951 PAPPA-AS1Q5QFB9 102 aa13.64□□□□□ -0.23
CDK11B-206ENST00000615951 CYSTM1Q9H1C7 97 aa13.64□□□□□ -0.23
CDK11B-206ENST00000615951 MYO9AB2RTY4 2548 aa13.64□□□□□ -0.23
CDK11B-206ENST00000615951 ATOX1O00244 68 aa13.64□□□□□ -0.23
CDK11B-206ENST00000615951 SMCR5Q8TEV8 140 aa13.63□□□□□ -0.23
CDK11B-206ENST00000615951 C11orf86A6NJI1 115 aa13.63□□□□□ -0.23
CDK11B-206ENST00000615951 ADARB2-AS1A8MUL3 147 aa13.63□□□□□ -0.23
CDK11B-206ENST00000615951 TSPEAR-AS2P59090 65 aa13.63□□□□□ -0.23
CDK11B-206ENST00000615951 AMELXQ99217 191 aa13.63□□□□□ -0.23
CDK11B-206ENST00000615951 SONP18583 2426 aaKnown RBP13.62□□□□□ -0.23
CDK11B-206ENST00000615951 LY6G6DO95868 133 aa13.62□□□□□ -0.23
CDK11B-206ENST00000615951 HIST1H4AP62805 103 aaKnown RBP13.62□□□□□ -0.23
CDK11B-206ENST00000615951 RHOHQ15669 191 aa13.62□□□□□ -0.23
CDK11B-206ENST00000615951 STHQ8IWL8 128 aa13.62□□□□□ -0.23
CDK11B-206ENST00000615951 DSCR8Q96T75 97 aa13.62□□□□□ -0.23
CDK11B-206ENST00000615951 ANK3Q12955 4377 aaKnown RBP13.62□□□□□ -0.23
CDK11B-206ENST00000615951 PYGO1Q9Y3Y4 419 aa13.62□□□□□ -0.23
CDK11B-206ENST00000615951 TMEM223A0PJW6 202 aa13.61□□□□□ -0.23
CDK11B-206ENST00000615951 C11orf72Q8NBR9 251 aa13.61□□□□□ -0.23
CDK11B-206ENST00000615951 TMEM141Q96I45 108 aa13.61□□□□□ -0.23
CDK11B-206ENST00000615951 MAST4O15021 2626 aa13.61□□□□□ -0.23
CDK11B-206ENST00000615951 SDIM1Q6ZPB5 146 aa13.6□□□□□ -0.23
CDK11B-206ENST00000615951 MUSTN1Q8IVN3 82 aa13.6□□□□□ -0.23
CDK11B-206ENST00000615951 SMR3AQ99954 134 aa13.6□□□□□ -0.23
CDK11B-206ENST00000615951 IGLV4-69A0A075B6H9 119 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms