RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 H3BT86 120 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 RNASE8Q8TDE3 154 aaKnown RBP7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 PLA2G2EQ9NZK7 142 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 MED13Q9UHV7 2174 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 UPK3BQ9BT76 320 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 ZFHX2Q9C0A1 2572 aaPredicted RBP7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 C3orf84H3BNL1 204 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 Q6ZTC4 211 aa7.05□□□□□ -1.28
TNFRSF9-204ENST00000615230 FHL2Q14192 279 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 MRPS12O15235 138 aaKnown RBP7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 CDPF1Q6NVV7 123 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 CNFNQ9BYD5 112 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 CACNA1HO95180 2353 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 A0A1B0GX51 115 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 RNF185Q96GF1 192 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 EXPH5Q8NEV8 1989 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 NAA38Q9BRA0 125 aaKnown RBP7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 LECT2O14960 151 aa7.04□□□□□ -1.28
TNFRSF9-204ENST00000615230 RTTNQ86VV8 2226 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 PTPRBP23467 1997 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 H0Y9J4 135 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 COX8CQ7Z4L0 72 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 C1orf158Q8N1D5 194 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 TPRP12270 2363 aaKnown RBP7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 CRIP1P50238 77 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 CSDC2Q9Y534 153 aaKnown RBP7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 PCP2Q8IVA1 136 aa7.03□□□□□ -1.28
TNFRSF9-204ENST00000615230 TRBV10-2A0A0K0K1G8 114 aa7.02□□□□□ -1.28
TNFRSF9-204ENST00000615230 A0A1B0GUV1 79 aa7.02□□□□□ -1.29
TNFRSF9-204ENST00000615230 ICE1Q9Y2F5 2266 aa7.02□□□□□ -1.29
TNFRSF9-204ENST00000615230 HIVEP2P31629 2446 aa7.02□□□□□ -1.29
TNFRSF9-204ENST00000615230 PRR9Q5T870 116 aa7.02□□□□□ -1.29
TNFRSF9-204ENST00000615230 CDC42SE2Q9NRR3 84 aa7.02□□□□□ -1.29
TNFRSF9-204ENST00000615230 CDKN2A-AS1Q9UH64 79 aa7.02□□□□□ -1.29
TNFRSF9-204ENST00000615230 OTOGLQ3ZCN5 2332 aa7.01□□□□□ -1.29
TNFRSF9-204ENST00000615230 LYPD5Q6UWN5 251 aa7.01□□□□□ -1.29
TNFRSF9-204ENST00000615230 POLR2KP53803 58 aaKnown RBP7.01□□□□□ -1.29
TNFRSF9-204ENST00000615230 LOC100131303A0A0U1RQF7 123 aa7□□□□□ -1.29
TNFRSF9-204ENST00000615230 DAND5Q8N907 189 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 MDFIQ99750 246 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 M0QXV9 152 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 K7ERJ3 54 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 NRACQ8N912 160 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 NTN5Q8WTR8 489 aaPredicted RBP6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 LINC00308Q8TCZ7 52 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 SEC61GP60059 68 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 C6orf223Q8N319 242 aa6.99□□□□□ -1.29
TNFRSF9-204ENST00000615230 ANKRD39Q53RE8 183 aa6.98□□□□□ -1.29
TNFRSF9-204ENST00000615230 REG3GQ6UW15 175 aa6.98□□□□□ -1.29
TNFRSF9-204ENST00000615230 USP17L23D6RBM5 183 aa6.98□□□□□ -1.29
TNFRSF9-204ENST00000615230 KIAA1549Q9HCM3 1950 aa6.98□□□□□ -1.29
TNFRSF9-204ENST00000615230 ATP5EP2Q5VTU8 51 aa6.98□□□□□ -1.29
TNFRSF9-204ENST00000615230 C10orf25Q5T742 122 aa6.98□□□□□ -1.29
TNFRSF9-204ENST00000615230 LINC01556Q5JQF7 62 aa6.97□□□□□ -1.29
TNFRSF9-204ENST00000615230 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.97□□□□□ -1.29
TNFRSF9-204ENST00000615230 LIMD2Q9BT23 127 aa6.97□□□□□ -1.29
TNFRSF9-204ENST00000615230 FAM229AH3BQW9 127 aa6.97□□□□□ -1.29
TNFRSF9-204ENST00000615230 PRYO14603 147 aa6.97□□□□□ -1.29
TNFRSF9-204ENST00000615230 WFDC9Q8NEX5 89 aa6.97□□□□□ -1.29
TNFRSF9-204ENST00000615230 Q6JHZ5 121 aa6.96□□□□□ -1.29
TNFRSF9-204ENST00000615230 H3BMG7 143 aa6.96□□□□□ -1.3
TNFRSF9-204ENST00000615230 LINC00173Q6ZV60 143 aa6.96□□□□□ -1.3
TNFRSF9-204ENST00000615230 PKDREJQ9NTG1 2253 aa6.96□□□□□ -1.3
TNFRSF9-204ENST00000615230 C11orf21Q9P2W6 132 aa6.96□□□□□ -1.3
TNFRSF9-204ENST00000615230 KLK9Q2XQG4 91 aa6.95□□□□□ -1.3
TNFRSF9-204ENST00000615230 BPY2O14599 106 aa6.95□□□□□ -1.3
TNFRSF9-204ENST00000615230 CYSRT1A8MQ03 144 aa6.95□□□□□ -1.3
TNFRSF9-204ENST00000615230 TET2Q6N021 2002 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF9-204ENST00000615230 ZNF73O43830 326 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF9-204ENST00000615230 NUPR1O60356 82 aa6.94□□□□□ -1.3
TNFRSF9-204ENST00000615230 XAGE1AQ9HD64 81 aa6.94□□□□□ -1.3
TNFRSF9-204ENST00000615230 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
TNFRSF9-204ENST00000615230 EDN2P20800 178 aa6.93□□□□□ -1.3
TNFRSF9-204ENST00000615230 ZNF318Q5VUA4 2279 aa6.93□□□□□ -1.3
TNFRSF9-204ENST00000615230 TP73-AS1Q9UF72 201 aa6.93□□□□□ -1.3
TNFRSF9-204ENST00000615230 NDUFC2-KCTD14E9PQ53 114 aa6.92□□□□□ -1.3
TNFRSF9-204ENST00000615230 DOCK11Q5JSL3 2073 aa6.92□□□□□ -1.3
TNFRSF9-204ENST00000615230 ATOX1O00244 68 aa6.92□□□□□ -1.3
TNFRSF9-204ENST00000615230 TMEM258P61165 79 aa6.92□□□□□ -1.3
TNFRSF9-204ENST00000615230 CASC2Q6XLA1 102 aa6.92□□□□□ -1.3
TNFRSF9-204ENST00000615230 TEN1Q86WV5 123 aa6.92□□□□□ -1.3
TNFRSF9-204ENST00000615230 C1orf137Q5JT78 98 aa6.91□□□□□ -1.3
TNFRSF9-204ENST00000615230 IGKV2-28A0A075B6P5 120 aa6.91□□□□□ -1.3
TNFRSF9-204ENST00000615230 IGKV2D-28P01615 120 aa6.91□□□□□ -1.3
TNFRSF9-204ENST00000615230 CEP250Q9BV73 2442 aa6.91□□□□□ -1.3
TNFRSF9-204ENST00000615230 SBSPONQ8IVN8 264 aa6.91□□□□□ -1.3
TNFRSF9-204ENST00000615230 CLEC2BQ92478 149 aa6.91□□□□□ -1.3
TNFRSF9-204ENST00000615230 IGKV4-1P06312 121 aa6.9□□□□□ -1.3
TNFRSF9-204ENST00000615230 NDUFC2O95298 119 aa6.9□□□□□ -1.3
TNFRSF9-204ENST00000615230 B5MCH6 92 aa6.9□□□□□ -1.31
TNFRSF9-204ENST00000615230 ETDBQ3ZM63 59 aa6.9□□□□□ -1.31
TNFRSF9-204ENST00000615230 C6orf99Q4VX62 202 aa6.89□□□□□ -1.31
TNFRSF9-204ENST00000615230 MRPL55Q7Z7F7 128 aaKnown RBP6.89□□□□□ -1.31
TNFRSF9-204ENST00000615230 NBDYA0A0U1RRE5 68 aa6.89□□□□□ -1.31
TNFRSF9-204ENST00000615230 FXYD2P54710 66 aa6.89□□□□□ -1.31
TNFRSF9-204ENST00000615230 SPTSSBQ8NFR3 76 aa6.89□□□□□ -1.31
TNFRSF9-204ENST00000615230 WFDC10BQ8IUB3 73 aa6.89□□□□□ -1.31
TNFRSF9-204ENST00000615230 A8MZ25 164 aa6.88□□□□□ -1.31
TNFRSF9-204ENST00000615230 IGIPA6NJ69 53 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms