RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 G3V4G9 280 aa13.64□□□□□ -0.23
MMP28-204ENST00000615136 DAZ2Q13117 558 aaKnown RBP13.64□□□□□ -0.23
MMP28-204ENST00000615136 C16orf74Q96GX8 76 aa13.64□□□□□ -0.23
MMP28-204ENST00000615136 H3BMG7 143 aa13.63□□□□□ -0.23
MMP28-204ENST00000615136 TSPAN13O95857 204 aa13.63□□□□□ -0.23
MMP28-204ENST00000615136 INSL3P51460 131 aa13.63□□□□□ -0.23
MMP28-204ENST00000615136 NBEAL2Q6ZNJ1 2754 aa13.63□□□□□ -0.23
MMP28-204ENST00000615136 COTL1Q14019 142 aa13.63□□□□□ -0.23
MMP28-204ENST00000615136 GAGE7O76087 117 aa13.62□□□□□ -0.23
MMP28-204ENST00000615136 GAGE12FP0CL80 117 aa13.62□□□□□ -0.23
MMP28-204ENST00000615136 GAGE12GP0CL81 117 aa13.62□□□□□ -0.23
MMP28-204ENST00000615136 GAGE12IP0CL82 117 aa13.62□□□□□ -0.23
MMP28-204ENST00000615136 PCP4P48539 62 aa13.62□□□□□ -0.23
MMP28-204ENST00000615136 IGHV3-64A0A075B6Q5 118 aa13.61□□□□□ -0.23
MMP28-204ENST00000615136 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.61□□□□□ -0.23
MMP28-204ENST00000615136 TINCRA0A1B0GVN0 87 aa13.61□□□□□ -0.23
MMP28-204ENST00000615136 IGKV2-29A2NJV5 120 aaPredicted RBP13.61□□□□□ -0.23
MMP28-204ENST00000615136 TIMM21Q9BVV7 248 aa13.61□□□□□ -0.23
MMP28-204ENST00000615136 TRAV4A0A0B4J268 109 aa13.61□□□□□ -0.23
MMP28-204ENST00000615136 APOMO95445 188 aa13.61□□□□□ -0.23
MMP28-204ENST00000615136 IGHV3-30-3P0DP02 117 aa13.61□□□□□ -0.23
MMP28-204ENST00000615136 CFC1BP0CG36 223 aa13.6□□□□□ -0.23
MMP28-204ENST00000615136 CFC1P0CG37 223 aa13.6□□□□□ -0.23
MMP28-204ENST00000615136 RNASE13Q5GAN3 156 aaKnown RBP13.6□□□□□ -0.23
MMP28-204ENST00000615136 Q6ZUT4 128 aa13.6□□□□□ -0.23
MMP28-204ENST00000615136 C10orf126Q8N4M7 172 aa13.6□□□□□ -0.23
MMP28-204ENST00000615136 PRO0461Q9UI25 63 aa13.6□□□□□ -0.23
MMP28-204ENST00000615136 FBN1P35555 2871 aaKnown RBP13.6□□□□□ -0.23
MMP28-204ENST00000615136 UBE2D3P61077 147 aa13.59□□□□□ -0.23
MMP28-204ENST00000615136 UBE2D2P62837 147 aa13.59□□□□□ -0.23
MMP28-204ENST00000615136 OVOL2Q9BRP0 275 aa13.59□□□□□ -0.23
MMP28-204ENST00000615136 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
MMP28-204ENST00000615136 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
MMP28-204ENST00000615136 TMEM238C9JI98 176 aa13.58□□□□□ -0.24
MMP28-204ENST00000615136 WFDC2Q14508 124 aa13.58□□□□□ -0.24
MMP28-204ENST00000615136 K7EQD1 137 aa13.57□□□□□ -0.24
MMP28-204ENST00000615136 GAGE13Q4V321 117 aa13.57□□□□□ -0.24
MMP28-204ENST00000615136 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
MMP28-204ENST00000615136 A0A0J9YXY3 114 aa13.57□□□□□ -0.24
MMP28-204ENST00000615136 TRBV10-1A0A0K0K1A3 114 aa13.57□□□□□ -0.24
MMP28-204ENST00000615136 RPL24P83731 157 aaKnown RBP13.57□□□□□ -0.24
MMP28-204ENST00000615136 KRTAP24-1Q3LI83 254 aa13.56□□□□□ -0.24
MMP28-204ENST00000615136 LYRM7Q5U5X0 104 aa13.56□□□□□ -0.24
MMP28-204ENST00000615136 X6R8D5 127 aa13.56□□□□□ -0.24
MMP28-204ENST00000615136 TRAV8-3A0A0A6YYJ7 113 aa13.56□□□□□ -0.24
MMP28-204ENST00000615136 LOC100131303A0A0U1RQF7 123 aa13.56□□□□□ -0.24
MMP28-204ENST00000615136 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
MMP28-204ENST00000615136 VSIG2Q96IQ7 327 aa13.55□□□□□ -0.24
MMP28-204ENST00000615136 PRO1854Q9UHT4 67 aa13.55□□□□□ -0.24
MMP28-204ENST00000615136 A4D1N5 150 aa13.54□□□□□ -0.24
MMP28-204ENST00000615136 GAGE12JA6NER3 117 aa13.54□□□□□ -0.24
MMP28-204ENST00000615136 GAGE4Q13068 117 aa13.54□□□□□ -0.24
MMP28-204ENST00000615136 GAGE5Q13069 117 aa13.54□□□□□ -0.24
MMP28-204ENST00000615136 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
MMP28-204ENST00000615136 LITAFQ99732 161 aa13.54□□□□□ -0.24
MMP28-204ENST00000615136 A0A0B4J2C4 111 aa13.53□□□□□ -0.24
MMP28-204ENST00000615136 LOC107984156A0A0G2JMH3 177 aa13.53□□□□□ -0.24
MMP28-204ENST00000615136 RPL36AP83881 106 aaKnown RBP13.53□□□□□ -0.24
MMP28-204ENST00000615136 NTM-AS1Q6ZSK4 140 aa13.53□□□□□ -0.24
MMP28-204ENST00000615136 ARL17AQ8IVW1 177 aa13.53□□□□□ -0.24
MMP28-204ENST00000615136 RPL36ALQ969Q0 106 aaKnown RBP13.53□□□□□ -0.24
MMP28-204ENST00000615136 EIF4EBP3O60516 100 aaPredicted RBP13.52□□□□□ -0.24
MMP28-204ENST00000615136 TIRAPP58753 221 aa13.52□□□□□ -0.24
MMP28-204ENST00000615136 MUSTN1Q8IVN3 82 aa13.52□□□□□ -0.24
MMP28-204ENST00000615136 DAZ4Q86SG3 579 aaKnown RBP13.52□□□□□ -0.25
MMP28-204ENST00000615136 MTURNQ8N3F0 131 aa13.52□□□□□ -0.25
MMP28-204ENST00000615136 GEMIN7Q9H840 131 aaKnown RBP13.52□□□□□ -0.25
MMP28-204ENST00000615136 DAZ3Q9NR90 486 aaKnown RBP13.52□□□□□ -0.25
MMP28-204ENST00000615136 NDUFA12Q9UI09 145 aa13.52□□□□□ -0.25
MMP28-204ENST00000615136 SPINK8P0C7L1 97 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 C21orf62-AS1Q17RA5 79 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 LINC00694P0DN24 101 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 DEFB130BP0DP73 79 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 DEFB130AP0DP74 79 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 FHL2Q14192 279 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 DEFB135Q30KP9 77 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 ZFAND6Q6FIF0 208 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 SFTA2Q6UW10 78 aa13.51□□□□□ -0.25
MMP28-204ENST00000615136 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
MMP28-204ENST00000615136 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.5□□□□□ -0.25
MMP28-204ENST00000615136 DGAT2L7PQ6IED9 249 aa13.5□□□□□ -0.25
MMP28-204ENST00000615136 SH2D6Q7Z4S9 175 aa13.5□□□□□ -0.25
MMP28-204ENST00000615136 SPANXDQ9BXN6 97 aa13.5□□□□□ -0.25
MMP28-204ENST00000615136 SPANXCQ9NY87 97 aa13.5□□□□□ -0.25
MMP28-204ENST00000615136 TRBV20-1A0A075B6N2 111 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 PSMB2P49721 201 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 FAM19A3Q7Z5A8 133 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 SBSPONQ8IVN8 264 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 TRGV4A0A0C4DH28 118 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 CDKN2A-AS1Q9UH64 79 aa13.49□□□□□ -0.25
MMP28-204ENST00000615136 STAB1Q9NY15 2570 aa13.48□□□□□ -0.25
MMP28-204ENST00000615136 CMYA5Q8N3K9 4069 aa13.48□□□□□ -0.25
MMP28-204ENST00000615136 DEFB4AO15263 64 aa13.48□□□□□ -0.25
MMP28-204ENST00000615136 WIPF1O43516 503 aa13.47□□□□□ -0.25
MMP28-204ENST00000615136 TCL1BO95988 128 aa13.47□□□□□ -0.25
MMP28-204ENST00000615136 SMCPP49901 116 aaPredicted RBP13.47□□□□□ -0.25
MMP28-204ENST00000615136 TRBV6-4A0A1B0GX49 114 aa13.47□□□□□ -0.25
MMP28-204ENST00000615136 A8MZ25 164 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms