RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 TRAV4A0A0B4J268 109 aa8.55□□□□□ -1.04
TP53-218ENST00000610292 RPL13AP40429 203 aaKnown RBP8.55□□□□□ -1.04
TP53-218ENST00000610292 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
TP53-218ENST00000610292 UBE2WQ96B02 151 aa8.55□□□□□ -1.04
TP53-218ENST00000610292 ZNF625Q96I27 306 aaPredicted RBP8.55□□□□□ -1.04
TP53-218ENST00000610292 ACACBO00763 2458 aa8.55□□□□□ -1.04
TP53-218ENST00000610292 ANAPC13Q9BS18 74 aa8.55□□□□□ -1.04
TP53-218ENST00000610292 PEMTQ9UBM1 199 aa8.55□□□□□ -1.04
TP53-218ENST00000610292 TRAV8-4A0A0B4J246 113 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 RS1O15537 224 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 NDUFA7O95182 113 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 FSHBP01225 129 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 BEAN1Q3B7T3 259 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 DNAJC30Q96LL9 226 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 YAE1D1Q9NRH1 226 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 CUBNO60494 3623 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 CACNA1AO00555 2505 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 SNCGO76070 127 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 INSP01308 110 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 LINC01600Q96MT4 127 aa8.54□□□□□ -1.04
TP53-218ENST00000610292 LINC00694P0DN24 101 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 IGHV4-31P0DP07 118 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 DEFB114Q30KQ6 69 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 FAM208BQ5VWN6 2430 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 NDUFA1O15239 70 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 TIRAPP58753 221 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 GAGE2BQ13066 116 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 GAGE2EQ4V326 116 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 Q9H8V8 135 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 GAGE2DQ9UEU5 116 aa8.53□□□□□ -1.04
TP53-218ENST00000610292 TEX15Q9BXT5 2789 aa8.52□□□□□ -1.04
TP53-218ENST00000610292 LST1O00453 97 aa8.52□□□□□ -1.04
TP53-218ENST00000610292 LCE2BO14633 110 aa8.52□□□□□ -1.04
TP53-218ENST00000610292 TIMM17BO60830 172 aa8.52□□□□□ -1.04
TP53-218ENST00000610292 CITED2Q99967 270 aaPredicted RBP8.52□□□□□ -1.04
TP53-218ENST00000610292 IGLV5-45A0A087WSX0 123 aa8.52□□□□□ -1.05
TP53-218ENST00000610292 IFITM1P13164 125 aa8.52□□□□□ -1.05
TP53-218ENST00000610292 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
TP53-218ENST00000610292 TRGV1A0A0A0MS02 117 aa8.51□□□□□ -1.05
TP53-218ENST00000610292 TRAV13-1A0A0B4J241 112 aa8.51□□□□□ -1.05
TP53-218ENST00000610292 C15orf53Q8NAA6 179 aa8.51□□□□□ -1.05
TP53-218ENST00000610292 C4orf3Q8WVX3 66 aa8.51□□□□□ -1.05
TP53-218ENST00000610292 H3BT86 120 aa8.51□□□□□ -1.05
TP53-218ENST00000610292 CIRBPQ14011 172 aaKnown RBP8.51□□□□□ -1.05
TP53-218ENST00000610292 LINC00308Q8TCZ7 52 aa8.51□□□□□ -1.05
TP53-218ENST00000610292 NHLRC4P0CG21 123 aaPredicted RBP8.5□□□□□ -1.05
TP53-218ENST00000610292 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 CHD6Q8TD26 2715 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 ODF3L2Q3SX64 289 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 PTPN13Q12923 2485 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 LRRK2Q5S007 2527 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 IGLV5-39A0A0G2JS06 123 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 HERVK_113P63121 156 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 Q8N2B8 174 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 C11orf44Q8N8P7 122 aa8.5□□□□□ -1.05
TP53-218ENST00000610292 ABCA12Q86UK0 2595 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 KRTAP10-9P60411 292 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 TTC32Q5I0X7 151 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 NTM-AS1Q6ZSK4 140 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 NAV2Q8IVL1 2488 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 SMIM1B2RUZ4 78 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 Q6ZTI0 123 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 STHQ8IWL8 128 aa8.49□□□□□ -1.05
TP53-218ENST00000610292 NDUFV3P56181 108 aaKnown RBP8.48□□□□□ -1.05
TP53-218ENST00000610292 EPG5Q9HCE0 2579 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 ZFYVE26Q68DK2 2539 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 A0A1W2PRX2 142 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 GAGE12JA6NER3 117 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 ZNF561-AS1K7EIQ3 104 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 GAGE4Q13068 117 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 GAGE5Q13069 117 aa8.48□□□□□ -1.05
TP53-218ENST00000610292 C2CD3Q4AC94 2353 aa8.47□□□□□ -1.05
TP53-218ENST00000610292 TLN2Q9Y4G6 2542 aa8.47□□□□□ -1.05
TP53-218ENST00000610292 PRB1P04280 392 aa8.47□□□□□ -1.05
TP53-218ENST00000610292 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
TP53-218ENST00000610292 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
TP53-218ENST00000610292 PRIMA1Q86XR5 153 aa8.47□□□□□ -1.05
TP53-218ENST00000610292 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
TP53-218ENST00000610292 NOTCH3Q9UM47 2321 aa8.46□□□□□ -1.05
TP53-218ENST00000610292 K7EQD1 137 aa8.46□□□□□ -1.05
TP53-218ENST00000610292 ZNF462Q96JM2 2506 aa8.46□□□□□ -1.06
TP53-218ENST00000610292 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
TP53-218ENST00000610292 WNK1Q9H4A3 2382 aa8.45□□□□□ -1.06
TP53-218ENST00000610292 B5MCH6 92 aa8.45□□□□□ -1.06
TP53-218ENST00000610292 GAGE6Q13070 117 aa8.45□□□□□ -1.06
TP53-218ENST00000610292 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
TP53-218ENST00000610292 NIPBLQ6KC79 2804 aaeCLIP8.45□□□□□ -1.06
TP53-218ENST00000610292 F5H768 121 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 COX7A2LO14548 114 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 DEFB121Q5J5C9 76 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 Q96MF0 132 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 NOP10Q9NPE3 64 aaKnown RBP8.44□□□□□ -1.06
TP53-218ENST00000610292 SS18L2Q9UHA2 77 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 CR1P17927 2039 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 DAZ2Q13117 558 aaKnown RBP8.44□□□□□ -1.06
TP53-218ENST00000610292 Q6Q795 121 aa8.44□□□□□ -1.06
TP53-218ENST00000610292 DAZ4Q86SG3 579 aaKnown RBP8.44□□□□□ -1.06
TP53-218ENST00000610292 DAZ3Q9NR90 486 aaKnown RBP8.44□□□□□ -1.06
TP53-218ENST00000610292 CSDC2Q9Y534 153 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms