RNA–Protein interactions for RNA: ENST00000609099.1

LINC01396-201, Transcript of long intergenic non-protein coding RNA 1396, humanhuman

TSL 3 BASIC

Gene LINC01396, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01396-201ENST00000609099 TMEM241Q24JQ0 296 aa4.41□□□□□ -1.7
LINC01396-201ENST00000609099 LBHQ53QV2 105 aaPredicted RBP4.41□□□□□ -1.7
LINC01396-201ENST00000609099 SPANXN1Q5VSR9 72 aa4.41□□□□□ -1.7
LINC01396-201ENST00000609099 EPDR1Q9UM22 224 aa4.41□□□□□ -1.7
LINC01396-201ENST00000609099 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.4□□□□□ -1.71
LINC01396-201ENST00000609099 IGKV2-29A2NJV5 120 aaPredicted RBP4.4□□□□□ -1.71
LINC01396-201ENST00000609099 CCDC160A6NGH7 325 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 F8WDY8 70 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 SNAI2O43623 268 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 BCE1O60756 84 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 NOL3O60936 208 aaKnown RBP4.4□□□□□ -1.71
LINC01396-201ENST00000609099 NDUFB6O95139 128 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 TLX1NBP0CAT3 122 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 ARL14EPLP0DKL9 152 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 Q6ZNX1 250 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 ANAPC16Q96DE5 110 aa4.4□□□□□ -1.71
LINC01396-201ENST00000609099 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
LINC01396-201ENST00000609099 KMT2DO14686 5537 aa4.39□□□□□ -1.71
LINC01396-201ENST00000609099 A0A1W2PPV4 95 aa4.39□□□□□ -1.71
LINC01396-201ENST00000609099 MGPP08493 103 aa4.39□□□□□ -1.71
LINC01396-201ENST00000609099 ZNF25P17030 456 aaPredicted RBP4.39□□□□□ -1.71
LINC01396-201ENST00000609099 KRTAP15-1Q3LI76 137 aa4.39□□□□□ -1.71
LINC01396-201ENST00000609099 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
LINC01396-201ENST00000609099 C3orf22Q8N5N4 141 aa4.39□□□□□ -1.71
LINC01396-201ENST00000609099 NDUFA13Q9P0J0 144 aa4.39□□□□□ -1.71
LINC01396-201ENST00000609099 NDUFA1O15239 70 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 AP3S2P59780 193 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 SUMO1P63165 101 aaKnown RBP4.38□□□□□ -1.71
LINC01396-201ENST00000609099 CNPY1Q3B7I2 92 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 LRRC37A5PQ49AS3 106 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 RASL11AQ6T310 242 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 NIT2Q9NQR4 276 aa4.38□□□□□ -1.71
LINC01396-201ENST00000609099 G3V3Q6 166 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 SSTP61278 116 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 SPAG11BQ08648 103 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 TOMM5Q8N4H5 51 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 AP1S3Q96PC3 154 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 SMDT1Q9H4I9 107 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 C6orf48Q9UBA6 75 aa4.37□□□□□ -1.71
LINC01396-201ENST00000609099 FAM25EA8MYX2 175 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 C1orf196B1AJZ1 125 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 STAG3L2P0CL84 134 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 STAG3L3P0CL85 134 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 GCHFRP30047 84 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 UBE2AP49459 152 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 SEC22CQ9BRL7 303 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 ZFP30Q9Y2G7 519 aa4.36□□□□□ -1.71
LINC01396-201ENST00000609099 NCR2O95944 276 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 SPINK1P00995 79 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 APCSP02743 223 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 NTF3P20783 257 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 S100A5P33763 92 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 OR10D4PQ8NGN7 298 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 C22orf24Q9Y442 160 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 ALG5Q9Y673 324 aa4.35□□□□□ -1.71
LINC01396-201ENST00000609099 KRTAP19-6Q3LI70 58 aa4.34□□□□□ -1.71
LINC01396-201ENST00000609099 PYDC2Q56P42 97 aa4.34□□□□□ -1.71
LINC01396-201ENST00000609099 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
LINC01396-201ENST00000609099 LINC00299Q6ZSB3 139 aa4.34□□□□□ -1.71
LINC01396-201ENST00000609099 BATF3Q9NR55 127 aa4.34□□□□□ -1.71
LINC01396-201ENST00000609099 CYTL1Q9NRR1 136 aa4.34□□□□□ -1.71
LINC01396-201ENST00000609099 PEX7O00628 323 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 PLA2G10O15496 165 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 OR5AL1P0C617 328 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 IL7P13232 177 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 CTRLP40313 264 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 C5orf38Q86SI9 138 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 SCGB1C1Q8TD33 95 aa4.33□□□□□ -1.72
LINC01396-201ENST00000609099 PACRGQ96M98 296 aaPredicted RBP4.33□□□□□ -1.72
LINC01396-201ENST00000609099 LTAP01374 205 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 MT2AP02795 61 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 CXCL1P09341 107 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 IFITM3Q01628 133 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 ZNF726P1Q15940 193 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 Q6Q795 121 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 DEDD2Q8WXF8 326 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 RAB24Q969Q5 203 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 SMIM3Q9BZL3 60 aa4.32□□□□□ -1.72
LINC01396-201ENST00000609099 NDUFC2-KCTD14E9PQ53 114 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 SLC25A20O43772 301 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 SIX6O95475 246 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 MT1FP04733 61 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 DEFA1P59665 94 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 UBE2G1P62253 170 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 ORAOV1Q8WV07 137 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 FAM104AQ969W3 186 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 RPL39LQ96EH5 51 aaKnown RBP4.31□□□□□ -1.72
LINC01396-201ENST00000609099 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
LINC01396-201ENST00000609099 IGLC6P0CF74 106 aa4.3□□□□□ -1.72
LINC01396-201ENST00000609099 CDC34P49427 236 aaPredicted RBP4.3□□□□□ -1.72
LINC01396-201ENST00000609099 RNASE13Q5GAN3 156 aaKnown RBP4.3□□□□□ -1.72
LINC01396-201ENST00000609099 LYZL1Q6UWQ5 148 aa4.3□□□□□ -1.72
LINC01396-201ENST00000609099 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
LINC01396-201ENST00000609099 GATD1Q8NB37 220 aa4.3□□□□□ -1.72
LINC01396-201ENST00000609099 MARVELD1Q9BSK0 173 aa4.3□□□□□ -1.72
LINC01396-201ENST00000609099 CCDC32Q9BV29 185 aa4.3□□□□□ -1.72
LINC01396-201ENST00000609099 TMEM167BQ9NRX6 74 aa4.3□□□□□ -1.72
LINC01396-201ENST00000609099 LYRM1O43325 122 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms