RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 VCYO14598 125 aa12.3□□□□□ -0.44
PPFIA3-207ENST00000602716 DEFB130BP0DP73 79 aa12.3□□□□□ -0.44
PPFIA3-207ENST00000602716 DEFB130AP0DP74 79 aa12.3□□□□□ -0.44
PPFIA3-207ENST00000602716 A0A1B0GWB2 263 aa12.3□□□□□ -0.44
PPFIA3-207ENST00000602716 LINC00612Q8N6U2 182 aa12.3□□□□□ -0.44
PPFIA3-207ENST00000602716 IGLV4-69A0A075B6H9 119 aa12.29□□□□□ -0.44
PPFIA3-207ENST00000602716 TMEM238C9JI98 176 aa12.29□□□□□ -0.44
PPFIA3-207ENST00000602716 M0QY20 66 aa12.29□□□□□ -0.44
PPFIA3-207ENST00000602716 HUWE1Q7Z6Z7 4374 aaKnown RBP12.29□□□□□ -0.44
PPFIA3-207ENST00000602716 TRGV2A0A075B6R0 118 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 TRAV4A0A0B4J268 109 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 TRBV6-5A0A0K0K1A5 114 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 KIR2DL4Q99706 377 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 TRBV27A0A0K0K1C4 114 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 TMEM238LA0A1B0GVL6 79 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 SDHAF1A6NFY7 115 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
PPFIA3-207ENST00000602716 C11orf86A6NJI1 115 aa12.27□□□□□ -0.44
PPFIA3-207ENST00000602716 PMVKQ15126 192 aa12.27□□□□□ -0.44
PPFIA3-207ENST00000602716 DEFB104AQ8WTQ1 72 aa12.27□□□□□ -0.44
PPFIA3-207ENST00000602716 TIMM17AQ99595 171 aa12.27□□□□□ -0.44
PPFIA3-207ENST00000602716 ZNF815PA8K554 130 aa12.27□□□□□ -0.45
PPFIA3-207ENST00000602716 RPL39P62891 51 aaKnown RBP12.27□□□□□ -0.45
PPFIA3-207ENST00000602716 PAPPA-AS1Q5QFB9 102 aa12.27□□□□□ -0.45
PPFIA3-207ENST00000602716 RHODO00212 210 aa12.26□□□□□ -0.45
PPFIA3-207ENST00000602716 TM2D3Q9BRN9 247 aa12.25□□□□□ -0.45
PPFIA3-207ENST00000602716 PLEKHB2Q96CS7 222 aa12.25□□□□□ -0.45
PPFIA3-207ENST00000602716 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
PPFIA3-207ENST00000602716 DNAH9Q9NYC9 4486 aa12.24□□□□□ -0.45
PPFIA3-207ENST00000602716 HERVK_113P61574 105 aa12.23□□□□□ -0.45
PPFIA3-207ENST00000602716 SCGB1D4Q6XE38 83 aa12.23□□□□□ -0.45
PPFIA3-207ENST00000602716 F8W1H4 67 aa12.22□□□□□ -0.45
PPFIA3-207ENST00000602716 FHL2Q14192 279 aa12.22□□□□□ -0.45
PPFIA3-207ENST00000602716 SPATA25Q9BR10 227 aa12.22□□□□□ -0.45
PPFIA3-207ENST00000602716 EDA2RQ9HAV5 297 aa12.22□□□□□ -0.45
PPFIA3-207ENST00000602716 A0A0J9YWU9 116 aa12.21□□□□□ -0.45
PPFIA3-207ENST00000602716 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
PPFIA3-207ENST00000602716 RHOHQ15669 191 aa12.21□□□□□ -0.45
PPFIA3-207ENST00000602716 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.45
PPFIA3-207ENST00000602716 TEX48A0A1B0GUV7 120 aa12.21□□□□□ -0.46
PPFIA3-207ENST00000602716 RPL24P83731 157 aaKnown RBP12.21□□□□□ -0.46
PPFIA3-207ENST00000602716 ZNRF2Q8NHG8 242 aa12.21□□□□□ -0.46
PPFIA3-207ENST00000602716 MEGF8Q7Z7M0 2845 aa12.21□□□□□ -0.46
PPFIA3-207ENST00000602716 A6NJY4 79 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 DAD1P61803 113 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 TRGV4A0A0C4DH28 118 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 H3BMG7 143 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 K7EQD1 137 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 SPART-AS1P0CW21 52 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 UBE2D1P51668 147 aa12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 C11orf68Q9H3H3 251 aaKnown RBP12.2□□□□□ -0.46
PPFIA3-207ENST00000602716 A0A0J9YY99 117 aa12.19□□□□□ -0.46
PPFIA3-207ENST00000602716 TSPEAR-AS2P59090 65 aa12.19□□□□□ -0.46
PPFIA3-207ENST00000602716 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
PPFIA3-207ENST00000602716 WFDC2Q14508 124 aa12.19□□□□□ -0.46
PPFIA3-207ENST00000602716 SPANXB1Q9NS25 103 aaPredicted RBP12.18□□□□□ -0.46
PPFIA3-207ENST00000602716 PGPEP1Q9NXJ5 209 aa12.18□□□□□ -0.46
PPFIA3-207ENST00000602716 PRKDCP78527 4128 aaKnown RBP12.18□□□□□ -0.46
PPFIA3-207ENST00000602716 TMEM170BQ5T4T1 132 aa12.18□□□□□ -0.46
PPFIA3-207ENST00000602716 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
PPFIA3-207ENST00000602716 PRO0461Q9UI25 63 aa12.18□□□□□ -0.46
PPFIA3-207ENST00000602716 AMELXQ99217 191 aa12.17□□□□□ -0.46
PPFIA3-207ENST00000602716 IGHV3-38A0A0C4DH36 116 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 GAGE12JA6NER3 117 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 I3L3M4 83 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 HTN3P15516 51 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 GAGE4Q13068 117 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 GAGE5Q13069 117 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 GAGE13Q4V321 117 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 C20orf203Q8NBC4 194 aa12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
PPFIA3-207ENST00000602716 B9D2Q9BPU9 175 aa12.15□□□□□ -0.46
PPFIA3-207ENST00000602716 Q6ZTC4 211 aa12.15□□□□□ -0.47
PPFIA3-207ENST00000602716 TNFRSF18Q9Y5U5 241 aa12.15□□□□□ -0.47
PPFIA3-207ENST00000602716 TRBV6-4A0A1B0GX49 114 aa12.14□□□□□ -0.47
PPFIA3-207ENST00000602716 J3QQQ9 107 aa12.14□□□□□ -0.47
PPFIA3-207ENST00000602716 NANOS2P60321 138 aaKnown RBP12.14□□□□□ -0.47
PPFIA3-207ENST00000602716 TSPAN13O95857 204 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 IGHV3-30P01768 117 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 ATP5G1P05496 136 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 IGHV3-30-5P0DP03 117 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 CRYBA4P53673 196 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 TMEM223A0PJW6 202 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 VSIG2Q96IQ7 327 aa12.13□□□□□ -0.47
PPFIA3-207ENST00000602716 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
PPFIA3-207ENST00000602716 LINC00694P0DN24 101 aa12.12□□□□□ -0.47
PPFIA3-207ENST00000602716 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
PPFIA3-207ENST00000602716 SH2D6Q7Z4S9 175 aa12.12□□□□□ -0.47
PPFIA3-207ENST00000602716 COL7A1Q02388 2944 aa12.12□□□□□ -0.47
PPFIA3-207ENST00000602716 IGLV4-3A0A075B6K6 122 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 F5H768 121 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 LEPROTO15243 131 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 SCGB1A1P11684 91 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 UBE2D3P61077 147 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 UBE2D2P62837 147 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 ETDBQ3ZM63 59 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 MTURNQ8N3F0 131 aa12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 RPL36AP83881 106 aaKnown RBP12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 RPL36ALQ969Q0 106 aaKnown RBP12.11□□□□□ -0.47
PPFIA3-207ENST00000602716 DNAJC30Q96LL9 226 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms