RNA–Protein interactions for RNA: ENST00000602565.2

SGMS1-206, Transcript of sphingomyelin synthase 1, humanhuman

Gene SGMS1, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-206ENST00000602565 SNHG12Q9BXW3 62 aa2.97□□□□□ -1.93
SGMS1-206ENST00000602565 SORL1Q92673 2214 aa2.97□□□□□ -1.93
SGMS1-206ENST00000602565 DDX60Q8IY21 1712 aaKnown RBP2.97□□□□□ -1.93
SGMS1-206ENST00000602565 NCMAPQ5T1S8 102 aa2.96□□□□□ -1.93
SGMS1-206ENST00000602565 LCN9Q8WX39 176 aa2.96□□□□□ -1.93
SGMS1-206ENST00000602565 ODF3Q96PU9 254 aa2.96□□□□□ -1.93
SGMS1-206ENST00000602565 SERP1Q9Y6X1 66 aa2.96□□□□□ -1.93
SGMS1-206ENST00000602565 SNRNP200O75643 2136 aaKnown RBP2.96□□□□□ -1.94
SGMS1-206ENST00000602565 SPAG17Q6Q759 2223 aa2.96□□□□□ -1.94
SGMS1-206ENST00000602565 PLXNA2O75051 1894 aa2.96□□□□□ -1.94
SGMS1-206ENST00000602565 EYSQ5T1H1 3165 aa2.96□□□□□ -1.94
SGMS1-206ENST00000602565 TET1Q8NFU7 2136 aa2.96□□□□□ -1.94
SGMS1-206ENST00000602565 SNAPC5O75971 98 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 FXYD4P59646 89 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 RPL37AP61513 92 aaKnown RBP2.95□□□□□ -1.94
SGMS1-206ENST00000602565 DCDP81605 110 aaKnown RBP2.95□□□□□ -1.94
SGMS1-206ENST00000602565 PYY3Q5JQD4 70 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 TMEM141Q96I45 108 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 Q9H521 79 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 AP4S1Q9Y587 144 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 V9GYS6 101 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 DUOX1Q9NRD9 1551 aa2.95□□□□□ -1.94
SGMS1-206ENST00000602565 TRAV30A0A087WSZ9 112 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 A6NIN4 97 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 CCKP06307 115 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 CACNA1BQ00975 2339 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 Q56UQ5 140 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 COL5A1-AS1Q5SY13 56 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 RPL7L1Q6DKI1 246 aaKnown RBP2.94□□□□□ -1.94
SGMS1-206ENST00000602565 PRUNE2Q8WUY3 3088 aa2.94□□□□□ -1.94
SGMS1-206ENST00000602565 TMEM218A2RU14 115 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 SBSPONQ8IVN8 264 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 PHIPQ8WWQ0 1821 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 LRRC37AA6NMS7 1700 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 TTC28Q96AY4 2481 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 TECTAO75443 2155 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 ATG2AQ2TAZ0 1938 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 GNG4P50150 75 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 SLC48A1Q6P1K1 146 aa2.93□□□□□ -1.94
SGMS1-206ENST00000602565 DDX60LQ5H9U9 1706 aaKnown RBP2.92□□□□□ -1.94
SGMS1-206ENST00000602565 LAMA2P24043 3122 aaKnown RBP2.92□□□□□ -1.94
SGMS1-206ENST00000602565 ANKRD36CQ5JPF3 1778 aa2.92□□□□□ -1.94
SGMS1-206ENST00000602565 PIGBOS1A0A0B4J2F0 54 aa2.92□□□□□ -1.94
SGMS1-206ENST00000602565 SPANXDQ9BXN6 97 aa2.92□□□□□ -1.94
SGMS1-206ENST00000602565 PIEZO1Q92508 2521 aa2.92□□□□□ -1.94
SGMS1-206ENST00000602565 SPAARA0A1B0GVQ0 90 aa2.91□□□□□ -1.94
SGMS1-206ENST00000602565 MCRIP1C9JLW8 97 aa2.91□□□□□ -1.94
SGMS1-206ENST00000602565 Q6AWC8 147 aa2.91□□□□□ -1.94
SGMS1-206ENST00000602565 MUC6Q6W4X9 2439 aa2.9□□□□□ -1.94
SGMS1-206ENST00000602565 SIPA1L3O60292 1781 aaPredicted RBP2.9□□□□□ -1.94
SGMS1-206ENST00000602565 MYH4Q9Y623 1939 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 A0A087WXM4 84 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 APOC4-APOC2K7ER74 178 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 APOC2P02655 101 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 KRTAP21-3Q3LHN1 58 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 C9orf116Q5BN46 136 aaPredicted RBP2.9□□□□□ -1.95
SGMS1-206ENST00000602565 C12orf73Q69YU5 71 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 SVBPQ8N300 66 aa2.9□□□□□ -1.95
SGMS1-206ENST00000602565 CDH23Q9H251 3354 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 LRRC37A2A6NM11 1700 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 PDCD5O14737 125 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 TNFP01375 233 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 TFF1P04155 84 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 TPPP2P59282 170 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 GNG11P61952 73 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 RPRMQ9NS64 109 aa2.89□□□□□ -1.95
SGMS1-206ENST00000602565 NCOA6Q14686 2063 aaPredicted RBP2.89□□□□□ -1.95
SGMS1-206ENST00000602565 ASCC3Q8N3C0 2202 aaKnown RBP2.88□□□□□ -1.95
SGMS1-206ENST00000602565 NCR3O14931 201 aa2.88□□□□□ -1.95
SGMS1-206ENST00000602565 CBLN1P23435 193 aa2.88□□□□□ -1.95
SGMS1-206ENST00000602565 XAF1Q6GPH4 301 aa2.88□□□□□ -1.95
SGMS1-206ENST00000602565 IFI27L1Q96BM0 104 aa2.88□□□□□ -1.95
SGMS1-206ENST00000602565 AMELYQ99218 206 aa2.88□□□□□ -1.95
SGMS1-206ENST00000602565 PRO1933Q9H354 126 aa2.88□□□□□ -1.95
SGMS1-206ENST00000602565 TEX49A0A1B0GTD5 131 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 MPC2O95563 127 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 APOC3P02656 99 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 LYNX1P0DP58 116 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 UBE2G1P62253 170 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 PEA15Q15121 130 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 TSKUQ8WUA8 353 aa2.87□□□□□ -1.95
SGMS1-206ENST00000602565 LSM10Q969L4 123 aaKnown RBP2.87□□□□□ -1.95
SGMS1-206ENST00000602565 SPTBP11277 2137 aa2.86□□□□□ -1.95
SGMS1-206ENST00000602565 ZNF720Q7Z2F6 126 aa2.86□□□□□ -1.95
SGMS1-206ENST00000602565 S100A13Q99584 98 aa2.86□□□□□ -1.95
SGMS1-206ENST00000602565 SMCO4Q9NRQ5 59 aa2.86□□□□□ -1.95
SGMS1-206ENST00000602565 IER3IP1Q9Y5U9 82 aa2.86□□□□□ -1.95
SGMS1-206ENST00000602565 ZFHX4Q86UP3 3567 aa2.86□□□□□ -1.95
SGMS1-206ENST00000602565 CITO14578 2027 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 LOC101927531A0A1B0GV80 90 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 TCRBV3S1A0A5B6 114 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 ANGP03950 147 aaKnown RBP2.85□□□□□ -1.95
SGMS1-206ENST00000602565 NMBP08949 121 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 HSD52Q0P140 79 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 Q6ZQY7 126 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 A0A1B0GUL6 1792 aa2.85□□□□□ -1.95
SGMS1-206ENST00000602565 A0A0G2JMZ2 1700 aa2.84□□□□□ -1.95
SGMS1-206ENST00000602565 ARAP2Q8WZ64 1704 aa2.84□□□□□ -1.95
SGMS1-206ENST00000602565 NCOR1O75376 2440 aa2.84□□□□□ -1.95
SGMS1-206ENST00000602565 PKD1L2Q7Z442 2459 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms