RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 HHLA3Q9XRX5 114 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 H7C423 109 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 C9orf66Q5T8R8 295 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 SPRY4Q9C004 299 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 H3BQ85 93 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 CENPFP49454 3210 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 NDUFC1O43677 76 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 FAM30AQ9NZY2 134 aa6.61□□□□□ -1.35
CSMD1-216ENST00000602557 CCL18P55774 89 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 NEXN-AS1Q8NBZ9 246 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 IGLV2-14P01704 120 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 Q8N976 141 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 PDE6GP18545 87 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 C22orf34Q6ZV56 151 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 MDFICQ9P1T7 246 aa6.6□□□□□ -1.35
CSMD1-216ENST00000602557 ZFP36P26651 326 aaKnown RBP6.59□□□□□ -1.35
CSMD1-216ENST00000602557 TRBV30A0A0K0K1B3 111 aa6.59□□□□□ -1.35
CSMD1-216ENST00000602557 BPTFQ12830 3046 aa6.59□□□□□ -1.35
CSMD1-216ENST00000602557 FAM19A3Q7Z5A8 133 aa6.59□□□□□ -1.35
CSMD1-216ENST00000602557 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
CSMD1-216ENST00000602557 LINC00526Q96FQ7 95 aa6.59□□□□□ -1.35
CSMD1-216ENST00000602557 IMUPQ9GZP8 106 aa6.59□□□□□ -1.35
CSMD1-216ENST00000602557 MIFP14174 115 aa6.59□□□□□ -1.36
CSMD1-216ENST00000602557 ODF3L1Q8IXM7 274 aa6.59□□□□□ -1.36
CSMD1-216ENST00000602557 SIRPDQ9H106 197 aa6.59□□□□□ -1.36
CSMD1-216ENST00000602557 A0A087WVE0 104 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 SPAG11BQ08648 103 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 DEFB113Q30KQ7 82 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 COL4A3Q01955 1670 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 C3orf84H3BNL1 204 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 LINC00310P59036 64 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 Q8N9W7 124 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 KLK12Q9UKR0 248 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 E7EUB6 86 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 WT1P19544 449 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-216ENST00000602557 ZNF80P51504 273 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-216ENST00000602557 ATRQ13535 2644 aa6.58□□□□□ -1.36
CSMD1-216ENST00000602557 C4orf3Q8WVX3 66 aa6.57□□□□□ -1.36
CSMD1-216ENST00000602557 TMEM223A0PJW6 202 aa6.57□□□□□ -1.36
CSMD1-216ENST00000602557 UNQ9165/PRO28630Q6UXU0 137 aa6.57□□□□□ -1.36
CSMD1-216ENST00000602557 ZNF22P17026 224 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-216ENST00000602557 ZFAND3Q9H8U3 227 aa6.57□□□□□ -1.36
CSMD1-216ENST00000602557 A8MZ25 164 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 Q6JHZ5 121 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 Q6ZS46 218 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 WFDC13Q8IUB5 93 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 CELA1Q9UNI1 258 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 U3KQK5 164 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 LINC00308Q8TCZ7 52 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 CENPEQ02224 2701 aa6.56□□□□□ -1.36
CSMD1-216ENST00000602557 LST1O00453 97 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 C20orf203Q8NBC4 194 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 LYRM9A8MSI8 78 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 GPHB5Q86YW7 130 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 LINC00467Q9BRT7 94 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 MRPS36P82909 103 aaKnown RBP6.55□□□□□ -1.36
CSMD1-216ENST00000602557 CDKN2A-AS1Q9UH64 79 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 DCANP1Q8TF63 244 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 MAST4O15021 2626 aa6.55□□□□□ -1.36
CSMD1-216ENST00000602557 Q8N7P7 452 aa6.54□□□□□ -1.36
CSMD1-216ENST00000602557 TRBV6-1A0A0K0K1D8 114 aa6.54□□□□□ -1.36
CSMD1-216ENST00000602557 C4orf48Q5BLP8 95 aa6.54□□□□□ -1.36
CSMD1-216ENST00000602557 RNF185Q96GF1 192 aa6.54□□□□□ -1.36
CSMD1-216ENST00000602557 SERTAD4-AS1Q5TG53 156 aa6.54□□□□□ -1.36
CSMD1-216ENST00000602557 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
CSMD1-216ENST00000602557 IGKV1D-37A0A075B6S9 117 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 CRIP2P52943 208 aaPredicted RBP6.53□□□□□ -1.36
CSMD1-216ENST00000602557 ADORA2A-AS1P86434 159 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 CASC2Q6XLA1 102 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 MED14OSP0DP75 135 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 CCDC140Q96MF4 163 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 K7EMT4 169 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 IGKV2-24A0A0C4DH68 120 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 A0A0J9YX75 114 aa6.53□□□□□ -1.36
CSMD1-216ENST00000602557 TRBV6-5A0A0K0K1A5 114 aa6.52□□□□□ -1.36
CSMD1-216ENST00000602557 C1orf158Q8N1D5 194 aa6.52□□□□□ -1.36
CSMD1-216ENST00000602557 TRAV7A0A075B6U4 112 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 IGF1P05019 195 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 RNF138Q8WVD3 245 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 GAS8-AS1O95177 125 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 K7ERS5 55 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 HECTD1Q9ULT8 2610 aa6.52□□□□□ -1.37
CSMD1-216ENST00000602557 FLNBO75369 2602 aaKnown RBP6.52□□□□□ -1.37
CSMD1-216ENST00000602557 MYCNOSP40205 109 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 EBI3Q14213 229 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 IGFL2Q6UWQ7 119 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 B9D2Q9BPU9 175 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 IGLV1-47P01700 117 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 LINC00269Q8N2A0 174 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 CCKP06307 115 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 TRBV10-1A0A0K0K1A3 114 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 IGLV4-3A0A075B6K6 122 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 KIR2DL5BQ8NHK3 375 aa6.51□□□□□ -1.37
CSMD1-216ENST00000602557 FLG2Q5D862 2391 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms