RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 A8MTW9 85 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.57□□□□□ -1.84
VRK3-226ENST00000602029 H3BRM9 83 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 IGKCP01834 107 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 NPSP0C0P6 89 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 FGF6P10767 208 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 GCSHP23434 173 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 ASIPP42127 132 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 PTTG1IPP53801 180 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 ODF1Q14990 250 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 MAJINQ3KP22 176 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 MPV17L2Q567V2 206 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 PIK3CD-AS1Q5SR53 167 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 SPANXN1Q5VSR9 72 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 C2orf91Q6ZV80 131 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 GTF2H5Q6ZYL4 71 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 NRACQ8N912 160 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 OR5A1Q8NGJ0 315 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 UPK3BQ9BT76 320 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 SMIM2Q9BVW6 85 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 MRPL16Q9NX20 251 aaKnown RBP3.57□□□□□ -1.84
VRK3-226ENST00000602029 TNFRSF18Q9Y5U5 241 aa3.57□□□□□ -1.84
VRK3-226ENST00000602029 LRP1Q07954 4544 aaKnown RBP3.57□□□□□ -1.84
VRK3-226ENST00000602029 A0A087WTM6 91 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 A0A087WX48 190 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 TMSB15BA0A087X1C1 80 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 TMEM238LA0A1B0GVL6 79 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 KLLNB2CW77 178 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 PRAC2D3DTV9 90 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 H3BNG1 76 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 TAX1BP3O14907 124 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 ERCC8Q13216 396 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 MRPL23Q16540 153 aaKnown RBP3.56□□□□□ -1.84
VRK3-226ENST00000602029 LINC00173Q6ZV60 143 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 NEGR1Q7Z3B1 354 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 ZFAND2AQ8N6M9 145 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 OR4C5Q8NGB2 326 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 TOMM6Q96B49 74 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 Q9HAA7 133 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 MSRB1Q9NZV6 116 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 PHLDA3Q9Y5J5 127 aa3.56□□□□□ -1.84
VRK3-226ENST00000602029 NACAE9PAV3 2078 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 TRBV6-5A0A0K0K1A5 114 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 LOC389332A0A1B0GUA5 103 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 C9orf118A6NHY6 69 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 F8VRH5 84 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 H7C1H1 209 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 K7ERU9 68 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 CRYGDP07320 174 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 PRSS1P07477 247 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 SMIM17P0DL12 118 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 GYPEP15421 78 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 S100A4P26447 101 aaKnown RBP3.55□□□□□ -1.84
VRK3-226ENST00000602029 KRTAP10-1P60331 282 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 SUMO2P61956 95 aaKnown RBP3.55□□□□□ -1.84
VRK3-226ENST00000602029 DAZ2Q13117 558 aaKnown RBP3.55□□□□□ -1.84
VRK3-226ENST00000602029 VAMP3Q15836 100 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 SYT8Q8NBV8 401 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 PTH2Q96A98 100 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 VSIG2Q96IQ7 327 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 TM2D2Q9BX73 214 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 PRO0255Q9UI72 69 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 HHLA3Q9XRX5 114 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 LRP2P98164 4655 aa3.55□□□□□ -1.84
VRK3-226ENST00000602029 MUC21A0A0G2JKD1 596 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 MUC21A0A140T8X8 626 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 H3BVH4 76 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 CCL25O15444 150 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 NCR2O95944 276 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 PLA2G1BP04054 148 aaKnown RBP3.54□□□□□ -1.84
VRK3-226ENST00000602029 CRYBA4P53673 196 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 XGP55808 180 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 RHOHQ15669 191 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 ANKRD39Q53RE8 183 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 MUC21Q5SSG8 566 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 LYRM7Q5U5X0 104 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 LYPD5Q6UWN5 251 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 FAM159AQ6UWV7 190 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 C10orf126Q8N4M7 172 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 TMEM141Q96I45 108 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 TIMM17AQ99595 171 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 LINC00467Q9BRT7 94 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 C11orf21Q9P2W6 132 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 CYSLTR1Q9Y271 337 aa3.54□□□□□ -1.84
VRK3-226ENST00000602029 TRGV11A0A075B6L2 103 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 IGHV1OR15-1A0A075B7D0 117 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 TRBV27A0A0K0K1C4 114 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 E9PLD3 99 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 H0Y8G0 127 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 VCYO14598 125 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 SMIM13P0DJ93 91 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 RNASE3P12724 160 aaKnown RBP3.53□□□□□ -1.84
VRK3-226ENST00000602029 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
VRK3-226ENST00000602029 HERVK_113P61574 105 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 ZC2HC1BQ5TFG8 222 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 Q6ZRN7 208 aaPredicted RBP3.53□□□□□ -1.84
VRK3-226ENST00000602029 WFDC10BQ8IUB3 73 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 LINC00612Q8N6U2 182 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 C9orf85Q96MD7 179 aa3.53□□□□□ -1.84
VRK3-226ENST00000602029 KIR2DL4Q99706 377 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms