RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 OR5A1Q8NGJ0 315 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 TMEM141Q96I45 108 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 PACRGQ96M98 296 aaPredicted RBP9.84□□□□□ -0.83
USE1-210ENST00000601662 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
USE1-210ENST00000601662 UBE2D4Q9Y2X8 147 aa9.84□□□□□ -0.83
USE1-210ENST00000601662 DNAH2Q9P225 4427 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 TRAV9-2A0A087WT02 112 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 A0A096LNJ9 63 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 NBDYA0A0U1RRE5 68 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 DNAH10OSP0CZ25 163 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 S100A2P29034 98 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 SNRPEP62304 92 aaKnown RBP9.83□□□□□ -0.84
USE1-210ENST00000601662 PDZD11Q5EBL8 140 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 LINC01556Q5JQF7 62 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 TIMM17AQ99595 171 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 HSPB8Q9UJY1 196 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 BIRC6Q9NR09 4857 aa9.83□□□□□ -0.84
USE1-210ENST00000601662 C5orf52A6NGY3 159 aa9.82□□□□□ -0.84
USE1-210ENST00000601662 IGIPA6NJ69 53 aa9.82□□□□□ -0.84
USE1-210ENST00000601662 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
USE1-210ENST00000601662 RTL8CO15255 209 aa9.82□□□□□ -0.84
USE1-210ENST00000601662 LEPROTL1O95214 131 aa9.82□□□□□ -0.84
USE1-210ENST00000601662 RBX1P62877 108 aa9.82□□□□□ -0.84
USE1-210ENST00000601662 MRPS36P82909 103 aaKnown RBP9.82□□□□□ -0.84
USE1-210ENST00000601662 C1orf134Q5TEV5 83 aa9.82□□□□□ -0.84
USE1-210ENST00000601662 MPV17L2Q567V2 206 aa9.81□□□□□ -0.84
USE1-210ENST00000601662 Q6ZN92 141 aa9.81□□□□□ -0.84
USE1-210ENST00000601662 DNAH17Q9UFH2 4485 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 LINC00336Q6ZUF6 198 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 HIST3H2BBQ8N257 126 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 ZNF664Q8N3J9 261 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 C10orf126Q8N4M7 172 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 CDC42SE2Q9NRR3 84 aa9.8□□□□□ -0.84
USE1-210ENST00000601662 IGHV3-30P01768 117 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 IGHV3-33P01772 117 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 ANGP03950 147 aaKnown RBP9.79□□□□□ -0.84
USE1-210ENST00000601662 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 IGHV3-30-5P0DP03 117 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 FABP4P15090 132 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 Q8N976 141 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 VCX2Q9H322 139 aa9.79□□□□□ -0.84
USE1-210ENST00000601662 IGLV4-60A0A075B6I1 120 aa9.78□□□□□ -0.84
USE1-210ENST00000601662 IGLV4-3A0A075B6K6 122 aa9.78□□□□□ -0.84
USE1-210ENST00000601662 C6orf223Q8N319 242 aa9.78□□□□□ -0.84
USE1-210ENST00000601662 PRSS1P07477 247 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 TTC32Q5I0X7 151 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 TEX43Q6ZNM6 134 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 C2orf88Q9BSF0 95 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 MAP1LC3CQ9BXW4 147 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 KRTAP1-5Q9BYS1 174 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 KLK12Q9UKR0 248 aa9.77□□□□□ -0.85
USE1-210ENST00000601662 CCL25O15444 150 aa9.76□□□□□ -0.85
USE1-210ENST00000601662 PMVKQ15126 192 aa9.76□□□□□ -0.85
USE1-210ENST00000601662 AMELXQ99217 191 aa9.76□□□□□ -0.85
USE1-210ENST00000601662 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
USE1-210ENST00000601662 OPRPNQ99935 248 aaPredicted RBP9.76□□□□□ -0.85
USE1-210ENST00000601662 FAT2Q9NYQ8 4349 aa9.75□□□□□ -0.85
USE1-210ENST00000601662 Q6ZUT4 128 aa9.75□□□□□ -0.85
USE1-210ENST00000601662 LINC00269Q8N2A0 174 aa9.75□□□□□ -0.85
USE1-210ENST00000601662 BAALCQ8WXS3 180 aa9.75□□□□□ -0.85
USE1-210ENST00000601662 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 IBA57-AS1B1ANH7 110 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 CRPP02741 224 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 REG3AQ06141 175 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 Q8N3U1 123 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 FAM104AQ969W3 186 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 CST9LQ9H4G1 147 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 PRR34Q9NV39 138 aa9.74□□□□□ -0.85
USE1-210ENST00000601662 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
USE1-210ENST00000601662 TRAV8-4A0A0B4J246 113 aa9.73□□□□□ -0.85
USE1-210ENST00000601662 SS18Q15532 418 aa9.73□□□□□ -0.85
USE1-210ENST00000601662 MIAQ16674 131 aa9.73□□□□□ -0.85
USE1-210ENST00000601662 LINC00173Q6ZV60 143 aa9.73□□□□□ -0.85
USE1-210ENST00000601662 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
USE1-210ENST00000601662 SEC11AP67812 179 aa9.72□□□□□ -0.85
USE1-210ENST00000601662 TNP2Q05952 138 aa9.72□□□□□ -0.85
USE1-210ENST00000601662 RNASE13Q5GAN3 156 aaKnown RBP9.72□□□□□ -0.85
USE1-210ENST00000601662 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
USE1-210ENST00000601662 UBE2WQ96B02 151 aa9.72□□□□□ -0.85
USE1-210ENST00000601662 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 LINC00959A0A1B0GUT2 108 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 A0A1B0GVY2 172 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 SYS1-DBNDD2H3BUS1 97 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 KRTDAPP60985 99 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 PET117Q6UWS5 81 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 ENHOQ6UWT2 76 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 RMI2Q96E14 147 aa9.71□□□□□ -0.86
USE1-210ENST00000601662 TRAV13-1A0A0B4J241 112 aa9.7□□□□□ -0.86
USE1-210ENST00000601662 UBE2D1P51668 147 aa9.7□□□□□ -0.86
USE1-210ENST00000601662 AKR1D1P51857 326 aa9.7□□□□□ -0.86
USE1-210ENST00000601662 HECTD4Q9Y4D8 3996 aa9.7□□□□□ -0.86
USE1-210ENST00000601662 H0Y8G0 127 aa9.69□□□□□ -0.86
USE1-210ENST00000601662 C3orf79P0CE67 100 aa9.69□□□□□ -0.86
USE1-210ENST00000601662 ZC2HC1BQ5TFG8 222 aa9.69□□□□□ -0.86
USE1-210ENST00000601662 CLPSL2Q6UWE3 100 aa9.69□□□□□ -0.86
USE1-210ENST00000601662 FAM19A3Q7Z5A8 133 aa9.69□□□□□ -0.86
USE1-210ENST00000601662 NFE4Q86UQ8 179 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms