RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-206ENST00000600078 SPATA12Q7Z6I5 190 aa12.69□□□□□ -0.38
RAB4B-206ENST00000600078 C1orf43Q9BWL3 253 aa12.69□□□□□ -0.38
RAB4B-206ENST00000600078 MAP1LC3AQ9H492 121 aa12.69□□□□□ -0.38
RAB4B-206ENST00000600078 TGIF2-C20orf24A0A0A6YYL0 155 aa12.68□□□□□ -0.38
RAB4B-206ENST00000600078 MT-ND6P03923 174 aa12.68□□□□□ -0.38
RAB4B-206ENST00000600078 KIAA1644Q3SXP7 199 aa12.68□□□□□ -0.38
RAB4B-206ENST00000600078 TMEM101Q96IK0 257 aa12.68□□□□□ -0.38
RAB4B-206ENST00000600078 LOC389332A0A1B0GUA5 103 aa12.67□□□□□ -0.38
RAB4B-206ENST00000600078 LRCOL1A6NCL2 159 aa12.67□□□□□ -0.38
RAB4B-206ENST00000600078 MRPL52Q86TS9 123 aaKnown RBP12.67□□□□□ -0.38
RAB4B-206ENST00000600078 UBR4Q5T4S7 5183 aa12.66□□□□□ -0.38
RAB4B-206ENST00000600078 RAB5AP20339 215 aa12.66□□□□□ -0.38
RAB4B-206ENST00000600078 SMAGPQ0VAQ4 97 aa12.66□□□□□ -0.38
RAB4B-206ENST00000600078 TMEM18Q96B42 140 aa12.66□□□□□ -0.38
RAB4B-206ENST00000600078 OR5A1Q8NGJ0 315 aa12.65□□□□□ -0.38
RAB4B-206ENST00000600078 MRPL18Q9H0U6 180 aaKnown RBP12.65□□□□□ -0.38
RAB4B-206ENST00000600078 TRAV8-4A0A0B4J246 113 aa12.64□□□□□ -0.39
RAB4B-206ENST00000600078 FABP9Q0Z7S8 132 aa12.64□□□□□ -0.39
RAB4B-206ENST00000600078 Q8N8P6 123 aa12.64□□□□□ -0.39
RAB4B-206ENST00000600078 KRTAP10-2P60368 255 aa12.63□□□□□ -0.39
RAB4B-206ENST00000600078 DGAT2L7PQ6IED9 249 aa12.63□□□□□ -0.39
RAB4B-206ENST00000600078 BAALCQ8WXS3 180 aa12.63□□□□□ -0.39
RAB4B-206ENST00000600078 VPS13BQ7Z7G8 4022 aa12.62□□□□□ -0.39
RAB4B-206ENST00000600078 IGLV10-54A0A075B6I4 117 aa12.62□□□□□ -0.39
RAB4B-206ENST00000600078 IGKV3OR2-268A0A0C4DH90 116 aa12.62□□□□□ -0.39
RAB4B-206ENST00000600078 NXT2Q9NPJ8 142 aaKnown RBP12.62□□□□□ -0.39
RAB4B-206ENST00000600078 SMCO4Q9NRQ5 59 aa12.62□□□□□ -0.39
RAB4B-206ENST00000600078 UBE2D4Q9Y2X8 147 aa12.62□□□□□ -0.39
RAB4B-206ENST00000600078 CSDC2Q9Y534 153 aaKnown RBP12.62□□□□□ -0.39
RAB4B-206ENST00000600078 TRAPPC1Q9Y5R8 145 aa12.62□□□□□ -0.39
RAB4B-206ENST00000600078 ZNF664Q8N3J9 261 aa12.61□□□□□ -0.39
RAB4B-206ENST00000600078 YPEL4Q96NS1 127 aa12.61□□□□□ -0.39
RAB4B-206ENST00000600078 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
RAB4B-206ENST00000600078 TIMM21Q9BVV7 248 aa12.61□□□□□ -0.39
RAB4B-206ENST00000600078 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
RAB4B-206ENST00000600078 PGPEP1Q9NXJ5 209 aa12.61□□□□□ -0.39
RAB4B-206ENST00000600078 FLG2Q5D862 2391 aaPredicted RBP12.61□□□□□ -0.39
RAB4B-206ENST00000600078 LECT2O14960 151 aa12.6□□□□□ -0.39
RAB4B-206ENST00000600078 RPL39P62891 51 aaKnown RBP12.6□□□□□ -0.39
RAB4B-206ENST00000600078 WFDC2Q14508 124 aa12.6□□□□□ -0.39
RAB4B-206ENST00000600078 KRTAP26-1Q6PEX3 210 aa12.6□□□□□ -0.39
RAB4B-206ENST00000600078 CBLN2Q8IUK8 224 aa12.6□□□□□ -0.39
RAB4B-206ENST00000600078 Q8N814 137 aa12.6□□□□□ -0.39
RAB4B-206ENST00000600078 K7EMI3 77 aa12.59□□□□□ -0.39
RAB4B-206ENST00000600078 IFI27P40305 119 aaPredicted RBP12.59□□□□□ -0.39
RAB4B-206ENST00000600078 ORMDL2Q53FV1 153 aa12.58□□□□□ -0.4
RAB4B-206ENST00000600078 SPANXA1Q9NS26 97 aa12.58□□□□□ -0.4
RAB4B-206ENST00000600078 FAT1Q14517 4588 aa12.57□□□□□ -0.4
RAB4B-206ENST00000600078 Q5VSD8 79 aa12.57□□□□□ -0.4
RAB4B-206ENST00000600078 CDPF1Q6NVV7 123 aa12.57□□□□□ -0.4
RAB4B-206ENST00000600078 PRSS3P2Q8NHM4 247 aa12.57□□□□□ -0.4
RAB4B-206ENST00000600078 SRRM2Q9UQ35 2752 aaKnown RBP12.56□□□□□ -0.4
RAB4B-206ENST00000600078 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
RAB4B-206ENST00000600078 FUSP35637 526 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAB4B-206ENST00000600078 NTN5Q8WTR8 489 aaPredicted RBP12.56□□□□□ -0.4
RAB4B-206ENST00000600078 CHCHD10Q8WYQ3 142 aaPredicted RBP12.56□□□□□ -0.4
RAB4B-206ENST00000600078 Q6ZUT4 128 aa12.55□□□□□ -0.4
RAB4B-206ENST00000600078 GAGE12HA6NDE8 117 aa12.54□□□□□ -0.4
RAB4B-206ENST00000600078 USP17L23D6RBM5 183 aa12.54□□□□□ -0.4
RAB4B-206ENST00000600078 SS18Q15532 418 aa12.54□□□□□ -0.4
RAB4B-206ENST00000600078 C14orf177Q52M58 125 aa12.54□□□□□ -0.4
RAB4B-206ENST00000600078 RNASE13Q5GAN3 156 aaKnown RBP12.54□□□□□ -0.4
RAB4B-206ENST00000600078 CYSLTR1Q9Y271 337 aa12.54□□□□□ -0.4
RAB4B-206ENST00000600078 IGLV5-52A0A0A0MRZ9 124 aa12.53□□□□□ -0.4
RAB4B-206ENST00000600078 G0S2P27469 103 aa12.53□□□□□ -0.4
RAB4B-206ENST00000600078 MRPS36P82909 103 aaKnown RBP12.53□□□□□ -0.4
RAB4B-206ENST00000600078 C2orf66Q6UXQ4 117 aa12.53□□□□□ -0.4
RAB4B-206ENST00000600078 PYGO1Q9Y3Y4 419 aa12.53□□□□□ -0.4
RAB4B-206ENST00000600078 FAM104AQ969W3 186 aa12.52□□□□□ -0.41
RAB4B-206ENST00000600078 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.41
RAB4B-206ENST00000600078 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.51□□□□□ -0.41
RAB4B-206ENST00000600078 LINC01546A6NGU7 62 aa12.51□□□□□ -0.41
RAB4B-206ENST00000600078 CCL25O15444 150 aa12.51□□□□□ -0.41
RAB4B-206ENST00000600078 XCL1P47992 114 aa12.51□□□□□ -0.41
RAB4B-206ENST00000600078 FA2HQ7L5A8 372 aa12.51□□□□□ -0.41
RAB4B-206ENST00000600078 TRAV13-1A0A0B4J241 112 aa12.5□□□□□ -0.41
RAB4B-206ENST00000600078 C1orf196B1AJZ1 125 aa12.5□□□□□ -0.41
RAB4B-206ENST00000600078 XGP55808 180 aa12.5□□□□□ -0.41
RAB4B-206ENST00000600078 FOXI1Q12951 378 aa12.49□□□□□ -0.41
RAB4B-206ENST00000600078 C18orf32Q8TCD1 76 aa12.49□□□□□ -0.41
RAB4B-206ENST00000600078 IGLV4-3A0A075B6K6 122 aa12.48□□□□□ -0.41
RAB4B-206ENST00000600078 GCSHP23434 173 aa12.48□□□□□ -0.41
RAB4B-206ENST00000600078 CD164L2Q6UWJ8 174 aa12.48□□□□□ -0.41
RAB4B-206ENST00000600078 TMEM141Q96I45 108 aa12.48□□□□□ -0.41
RAB4B-206ENST00000600078 PRSS1P07477 247 aa12.47□□□□□ -0.41
RAB4B-206ENST00000600078 CFAP161Q6P656 301 aa12.47□□□□□ -0.41
RAB4B-206ENST00000600078 TOMM6Q96B49 74 aa12.47□□□□□ -0.41
RAB4B-206ENST00000600078 IGIPA6NJ69 53 aa12.46□□□□□ -0.41
RAB4B-206ENST00000600078 IFITM10A6NMD0 228 aa12.46□□□□□ -0.41
RAB4B-206ENST00000600078 J3QL48 77 aa12.46□□□□□ -0.41
RAB4B-206ENST00000600078 NPSP0C0P6 89 aa12.46□□□□□ -0.41
RAB4B-206ENST00000600078 LINC01549A6NIU2 74 aa12.45□□□□□ -0.42
RAB4B-206ENST00000600078 COLCA2A8K830 154 aa12.45□□□□□ -0.42
RAB4B-206ENST00000600078 LINC00614P0C842 121 aa12.45□□□□□ -0.42
RAB4B-206ENST00000600078 Q6ZN92 141 aa12.45□□□□□ -0.42
RAB4B-206ENST00000600078 AP5S1Q9NUS5 200 aa12.45□□□□□ -0.42
RAB4B-206ENST00000600078 hDV102S1A0JD36 115 aa12.44□□□□□ -0.42
RAB4B-206ENST00000600078 KRTAP10-1P60331 282 aa12.44□□□□□ -0.42
RAB4B-206ENST00000600078 RAB5BP61020 215 aa12.44□□□□□ -0.42
RAB4B-206ENST00000600078 TEX43Q6ZNM6 134 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms