RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 TRBV6-5A0A0K0K1A5 114 aa8.8□□□□□ -1
SCN8A-208ENST00000599343 HILS1P60008 231 aa8.8□□□□□ -1
SCN8A-208ENST00000599343 IGHV4-31P0DP07 118 aa8.8□□□□□ -1
SCN8A-208ENST00000599343 MUC6Q6W4X9 2439 aa8.8□□□□□ -1
SCN8A-208ENST00000599343 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.8□□□□□ -1
SCN8A-208ENST00000599343 PRR15LQ9BU68 103 aa8.8□□□□□ -1
SCN8A-208ENST00000599343 CSPG4Q6UVK1 2322 aa8.8□□□□□ -1
SCN8A-208ENST00000599343 SMIM9A6NGZ8 99 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 BBC3Q96PG8 261 aaPredicted RBP8.79□□□□□ -1
SCN8A-208ENST00000599343 ZFAND3Q9H8U3 227 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 IGHV4-30-4P0DP06 118 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 SYCNQ0VAF6 134 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 U3KQK5 164 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 IL17DQ8TAD2 202 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 FREM1Q5H8C1 2179 aa8.79□□□□□ -1
SCN8A-208ENST00000599343 SONP18583 2426 aaKnown RBP8.78□□□□□ -1
SCN8A-208ENST00000599343 FBXL19-AS1Q494R0 122 aa8.78□□□□□ -1
SCN8A-208ENST00000599343 Q6ZQY7 126 aa8.78□□□□□ -1
SCN8A-208ENST00000599343 LOC100131303A0A0U1RQF7 123 aa8.78□□□□□ -1
SCN8A-208ENST00000599343 A6NED7 52 aa8.78□□□□□ -1
SCN8A-208ENST00000599343 C22orf34Q6ZV56 151 aa8.78□□□□□ -1
SCN8A-208ENST00000599343 CCDC179H3BU77 68 aa8.77□□□□□ -1
SCN8A-208ENST00000599343 LINC00574Q9H8X3 128 aa8.77□□□□□ -1
SCN8A-208ENST00000599343 FAM30AQ9NZY2 134 aa8.77□□□□□ -1
SCN8A-208ENST00000599343 NDUFA7O95182 113 aa8.77□□□□□ -1.01
SCN8A-208ENST00000599343 COL4A3Q01955 1670 aa8.77□□□□□ -1.01
SCN8A-208ENST00000599343 IGLV2-18A0A075B6J9 118 aa8.77□□□□□ -1.01
SCN8A-208ENST00000599343 RPL37AP8A6NKH3 93 aa8.77□□□□□ -1.01
SCN8A-208ENST00000599343 V9GYY9 64 aa8.77□□□□□ -1.01
SCN8A-208ENST00000599343 LY6LH3BQJ8 138 aa8.77□□□□□ -1.01
SCN8A-208ENST00000599343 INAFM1C9JVW0 142 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 TSHBP01222 138 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 EIF4EBP1Q13541 118 aaPredicted RBP8.76□□□□□ -1.01
SCN8A-208ENST00000599343 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 TRBV6-4A0A1B0GX49 114 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 PRM2P04554 102 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 FAM19A3Q7Z5A8 133 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 SMIM11BQ8TCY0 68 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 C9orf85Q96MD7 179 aa8.76□□□□□ -1.01
SCN8A-208ENST00000599343 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 RBX1P62877 108 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 SRCAPQ6ZRS2 3230 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 M0R2N4 97 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 MYO18BQ8IUG5 2567 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 ADAMTS9Q9P2N4 1935 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 ZNF106Q9H2Y7 1883 aaKnown RBP8.75□□□□□ -1.01
SCN8A-208ENST00000599343 TIMM17BO60830 172 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 CRIP3Q6Q6R5 217 aa8.75□□□□□ -1.01
SCN8A-208ENST00000599343 Q6ZS46 218 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 C2orf91Q6ZV80 131 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 NCOA6Q14686 2063 aaPredicted RBP8.74□□□□□ -1.01
SCN8A-208ENST00000599343 IGLV9-49A0A0B4J1Y8 123 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 IGLV2-11P01706 119 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 PRR9Q5T870 116 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 WFDC10AQ9H1F0 79 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 Q6ZSV7 163 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 NRACQ8N912 160 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 POM121L12Q8N7R1 296 aa8.74□□□□□ -1.01
SCN8A-208ENST00000599343 MIFP14174 115 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 CUL9Q8IWT3 2517 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 C7orf33Q8WU49 177 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 SORL1Q92673 2214 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 M0R378 163 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 RNASE3P12724 160 aaKnown RBP8.73□□□□□ -1.01
SCN8A-208ENST00000599343 ATP5EP56381 51 aaPredicted RBP8.73□□□□□ -1.01
SCN8A-208ENST00000599343 LST1O00453 97 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 UBE2D4Q9Y2X8 147 aa8.73□□□□□ -1.01
SCN8A-208ENST00000599343 UBE2D1P51668 147 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 CD164L2Q6UWJ8 174 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 C18orf65Q6ZTR6 163 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 Q8N9L7 120 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 YPEL4Q96NS1 127 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 PYGO1Q9Y3Y4 419 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 GAS8-AS1O95177 125 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 NDUFC1O43677 76 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 HIVEP2P31629 2446 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 LINC00959A0A1B0GUT2 108 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 C11orf21Q9P2W6 132 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
SCN8A-208ENST00000599343 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.01
SCN8A-208ENST00000599343 XGP55808 180 aa8.71□□□□□ -1.02
SCN8A-208ENST00000599343 PTPN13Q12923 2485 aa8.71□□□□□ -1.02
SCN8A-208ENST00000599343 LRRC75A-AS1Q8N1F1 130 aa8.71□□□□□ -1.02
SCN8A-208ENST00000599343 COX7CP15954 63 aa8.7□□□□□ -1.02
SCN8A-208ENST00000599343 CELA1Q9UNI1 258 aa8.7□□□□□ -1.02
SCN8A-208ENST00000599343 KPRPQ5T749 579 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-208ENST00000599343 TMEM131Q92545 1883 aa8.7□□□□□ -1.02
SCN8A-208ENST00000599343 TRAV10A0A0B4J240 114 aa8.69□□□□□ -1.02
SCN8A-208ENST00000599343 EBI3Q14213 229 aa8.69□□□□□ -1.02
SCN8A-208ENST00000599343 PRR14LQ5THK1 2151 aa8.69□□□□□ -1.02
SCN8A-208ENST00000599343 IGLV4-69A0A075B6H9 119 aa8.69□□□□□ -1.02
SCN8A-208ENST00000599343 IMUPQ9GZP8 106 aa8.68□□□□□ -1.02
SCN8A-208ENST00000599343 PLAC8L1A1L4L8 177 aa8.68□□□□□ -1.02
SCN8A-208ENST00000599343 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
SCN8A-208ENST00000599343 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
SCN8A-208ENST00000599343 UBE2D3P61077 147 aa8.68□□□□□ -1.02
SCN8A-208ENST00000599343 ZNF706Q9Y5V0 76 aaPredicted RBP8.68□□□□□ -1.02
SCN8A-208ENST00000599343 ZNF702PQ9H963 129 aa8.68□□□□□ -1.02
SCN8A-208ENST00000599343 PRORYQ9H606 182 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms