RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-223ENST00000598717 PDZD11Q5EBL8 140 aa13.09□□□□□ -0.31
LTBP4-223ENST00000598717 ZNF664Q8N3J9 261 aa13.09□□□□□ -0.31
LTBP4-223ENST00000598717 C10orf126Q8N4M7 172 aa13.09□□□□□ -0.31
LTBP4-223ENST00000598717 TMEM141Q96I45 108 aa13.09□□□□□ -0.31
LTBP4-223ENST00000598717 KLK12Q9UKR0 248 aa13.09□□□□□ -0.31
LTBP4-223ENST00000598717 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.08□□□□□ -0.32
LTBP4-223ENST00000598717 ATP5LO75964 103 aa13.08□□□□□ -0.32
LTBP4-223ENST00000598717 LEPROTL1O95214 131 aa13.08□□□□□ -0.32
LTBP4-223ENST00000598717 NPSP0C0P6 89 aa13.08□□□□□ -0.32
LTBP4-223ENST00000598717 PAPPA-AS1Q5QFB9 102 aa13.08□□□□□ -0.32
LTBP4-223ENST00000598717 Q6ZN92 141 aa13.08□□□□□ -0.32
LTBP4-223ENST00000598717 CDC42SE2Q9NRR3 84 aa13.08□□□□□ -0.32
LTBP4-223ENST00000598717 SNRPEP62304 92 aaKnown RBP13.07□□□□□ -0.32
LTBP4-223ENST00000598717 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
LTBP4-223ENST00000598717 TTC32Q5I0X7 151 aa13.07□□□□□ -0.32
LTBP4-223ENST00000598717 OPRPNQ99935 248 aaPredicted RBP13.07□□□□□ -0.32
LTBP4-223ENST00000598717 IGLV4-3A0A075B6K6 122 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 CRPP02741 224 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 FABP4P15090 132 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 S100A2P29034 98 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 Q6ZUT4 128 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 LINC00269Q8N2A0 174 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 HSPB8Q9UJY1 196 aa13.06□□□□□ -0.32
LTBP4-223ENST00000598717 NBDYA0A0U1RRE5 68 aa13.05□□□□□ -0.32
LTBP4-223ENST00000598717 RNASE13Q5GAN3 156 aaKnown RBP13.05□□□□□ -0.32
LTBP4-223ENST00000598717 VCX2Q9H322 139 aa13.05□□□□□ -0.32
LTBP4-223ENST00000598717 IGKV3OR2-268A0A0C4DH90 116 aa13.04□□□□□ -0.32
LTBP4-223ENST00000598717 REG3AQ06141 175 aa13.04□□□□□ -0.32
LTBP4-223ENST00000598717 CLPSL2Q6UWE3 100 aa13.04□□□□□ -0.32
LTBP4-223ENST00000598717 TEX43Q6ZNM6 134 aa13.04□□□□□ -0.32
LTBP4-223ENST00000598717 UBE2WQ96B02 151 aa13.04□□□□□ -0.32
LTBP4-223ENST00000598717 C5orf52A6NGY3 159 aa13.03□□□□□ -0.32
LTBP4-223ENST00000598717 IBA57-AS1B1ANH7 110 aa13.03□□□□□ -0.32
LTBP4-223ENST00000598717 HIST3H2BBQ8N257 126 aa13.03□□□□□ -0.32
LTBP4-223ENST00000598717 IFI27L1Q96BM0 104 aa13.03□□□□□ -0.32
LTBP4-223ENST00000598717 LCE6AA0A183 80 aa13.02□□□□□ -0.33
LTBP4-223ENST00000598717 M0R2N4 97 aa13.02□□□□□ -0.33
LTBP4-223ENST00000598717 FAM104AQ969W3 186 aa13.02□□□□□ -0.33
LTBP4-223ENST00000598717 C2orf88Q9BSF0 95 aa13.02□□□□□ -0.33
LTBP4-223ENST00000598717 TRAV8-3A0A0A6YYJ7 113 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 IFITM10A6NMD0 228 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 PRSS1P07477 247 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 ENHOQ6UWT2 76 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 LINC00173Q6ZV60 143 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 BAALCQ8WXS3 180 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 PACRGQ96M98 296 aaPredicted RBP13.01□□□□□ -0.33
LTBP4-223ENST00000598717 LYSTQ99698 3801 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 PRR34Q9NV39 138 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 ALMS1Q8TCU4 4167 aa13.01□□□□□ -0.33
LTBP4-223ENST00000598717 PMVKQ15126 192 aa13□□□□□ -0.33
LTBP4-223ENST00000598717 MIAQ16674 131 aa13□□□□□ -0.33
LTBP4-223ENST00000598717 AMELXQ99217 191 aa13□□□□□ -0.33
LTBP4-223ENST00000598717 KRTAP1-5Q9BYS1 174 aa13□□□□□ -0.33
LTBP4-223ENST00000598717 TRAV13-1A0A0B4J241 112 aa12.99□□□□□ -0.33
LTBP4-223ENST00000598717 ZC2HC1BQ5TFG8 222 aa12.99□□□□□ -0.33
LTBP4-223ENST00000598717 MAP1LC3CQ9BXW4 147 aa12.99□□□□□ -0.33
LTBP4-223ENST00000598717 Q9HAA7 133 aa12.99□□□□□ -0.33
LTBP4-223ENST00000598717 VPS13DQ5THJ4 4388 aa12.99□□□□□ -0.33
LTBP4-223ENST00000598717 SS18Q15532 418 aa12.98□□□□□ -0.33
LTBP4-223ENST00000598717 CST9LQ9H4G1 147 aa12.98□□□□□ -0.33
LTBP4-223ENST00000598717 TRAV8-4A0A0B4J246 113 aa12.97□□□□□ -0.33
LTBP4-223ENST00000598717 LINC00959A0A1B0GUT2 108 aa12.97□□□□□ -0.33
LTBP4-223ENST00000598717 H0Y8G0 127 aa12.97□□□□□ -0.33
LTBP4-223ENST00000598717 RMI2Q96E14 147 aa12.97□□□□□ -0.33
LTBP4-223ENST00000598717 HIST1H2BLQ99880 126 aa12.97□□□□□ -0.33
LTBP4-223ENST00000598717 IGLV10-54A0A075B6I4 117 aa12.96□□□□□ -0.33
LTBP4-223ENST00000598717 PRSS29PA6NIE9 313 aa12.96□□□□□ -0.33
LTBP4-223ENST00000598717 CCL25O15444 150 aa12.96□□□□□ -0.33
LTBP4-223ENST00000598717 Q6ZR54 194 aa12.96□□□□□ -0.33
LTBP4-223ENST00000598717 C1orf43Q9BWL3 253 aa12.96□□□□□ -0.33
LTBP4-223ENST00000598717 IGKV2D-24A0A075B6R9 120 aa12.95□□□□□ -0.34
LTBP4-223ENST00000598717 TRAV12-1A0A0B4J245 112 aa12.94□□□□□ -0.34
LTBP4-223ENST00000598717 UBE2D1P51668 147 aa12.94□□□□□ -0.34
LTBP4-223ENST00000598717 NFE4Q86UQ8 179 aa12.94□□□□□ -0.34
LTBP4-223ENST00000598717 KRTDAPP60985 99 aa12.93□□□□□ -0.34
LTBP4-223ENST00000598717 CHCHD10Q8WYQ3 142 aaPredicted RBP12.93□□□□□ -0.34
LTBP4-223ENST00000598717 TM2D2Q9BX73 214 aa12.93□□□□□ -0.34
LTBP4-223ENST00000598717 CHTOPQ9Y3Y2 248 aaKnown RBP12.93□□□□□ -0.34
LTBP4-223ENST00000598717 XCL1P47992 114 aa12.92□□□□□ -0.34
LTBP4-223ENST00000598717 SEC11AP67812 179 aa12.92□□□□□ -0.34
LTBP4-223ENST00000598717 COX11Q9Y6N1 276 aa12.92□□□□□ -0.34
LTBP4-223ENST00000598717 DNAH1Q9P2D7 4330 aa12.92□□□□□ -0.34
LTBP4-223ENST00000598717 SYS1-DBNDD2H3BUS1 97 aa12.91□□□□□ -0.34
LTBP4-223ENST00000598717 C3orf79P0CE67 100 aa12.91□□□□□ -0.34
LTBP4-223ENST00000598717 C6orf223Q8N319 242 aa12.91□□□□□ -0.34
LTBP4-223ENST00000598717 A0A0J9YXV3 536 aa12.9□□□□□ -0.34
LTBP4-223ENST00000598717 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
LTBP4-223ENST00000598717 C1orf134Q5TEV5 83 aa12.9□□□□□ -0.34
LTBP4-223ENST00000598717 PET117Q6UWS5 81 aa12.9□□□□□ -0.34
LTBP4-223ENST00000598717 GEMIN7Q9H840 131 aaKnown RBP12.9□□□□□ -0.34
LTBP4-223ENST00000598717 GAGE12HA6NDE8 117 aa12.89□□□□□ -0.35
LTBP4-223ENST00000598717 PSCAO43653 123 aa12.89□□□□□ -0.35
LTBP4-223ENST00000598717 HERVK_113P63121 156 aa12.89□□□□□ -0.35
LTBP4-223ENST00000598717 CD164L2Q6UWJ8 174 aa12.89□□□□□ -0.35
LTBP4-223ENST00000598717 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
LTBP4-223ENST00000598717 SPATA12Q7Z6I5 190 aa12.89□□□□□ -0.35
LTBP4-223ENST00000598717 TINCRA0A1B0GVN0 87 aa12.88□□□□□ -0.35
LTBP4-223ENST00000598717 F8VRH5 84 aa12.88□□□□□ -0.35
LTBP4-223ENST00000598717 ODF1Q14990 250 aa12.88□□□□□ -0.35
LTBP4-223ENST00000598717 OR10D4PQ8NGN7 298 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms