RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 GATA3P23771 443 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 C5orf38Q86SI9 138 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 NFE4Q86UQ8 179 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 CLUHP3Q96NS8 147 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 TIMM17AQ99595 171 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 KIF25-AS1Q9Y6Z4 181 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 A0A0J9YXY3 114 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 TRBV27A0A0K0K1C4 114 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 LEPROTO15243 131 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 NXPH4O95158 308 aa9.09□□□□□ -0.95
USHBP1-207ENST00000597928 TEX49A0A1B0GTD5 131 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 SLC25A29Q8N8R3 303 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 TMEM101Q96IK0 257 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 IGHV3-30P01768 117 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 IGHV3-30-5P0DP03 117 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 DEFB113Q30KQ7 82 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 C1QTNF4Q9BXJ3 329 aa9.08□□□□□ -0.96
USHBP1-207ENST00000597928 RBMY1BA6NDE4 496 aaKnown RBP9.07□□□□□ -0.96
USHBP1-207ENST00000597928 RBMY1EA6NEQ0 496 aaKnown RBP9.07□□□□□ -0.96
USHBP1-207ENST00000597928 LGALS9O00182 355 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 RBMY1DP0C7P1 496 aaKnown RBP9.07□□□□□ -0.96
USHBP1-207ENST00000597928 TTC32Q5I0X7 151 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 TRBV7-9A0A0J9YWB2 115 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 PPDPFLQ8WWR9 84 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 CRLF1O75462 422 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 RHOHQ15669 191 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 SMR3AQ99954 134 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 ANAPC13Q9BS18 74 aa9.07□□□□□ -0.96
USHBP1-207ENST00000597928 TMEM223A0PJW6 202 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 ADAMTSL4-AS1Q5T5F5 129 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 C9orf85Q96MD7 179 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 IGLV10-54A0A075B6I4 117 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 CFAP126Q5VTH2 177 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 Q6YL49 198 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.06□□□□□ -0.96
USHBP1-207ENST00000597928 ATXN8Q156A1 80 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 TEX29Q8N6K0 151 aa9.06□□□□□ -0.96
USHBP1-207ENST00000597928 TRAV8-4A0A0B4J246 113 aa9.05□□□□□ -0.96
USHBP1-207ENST00000597928 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
USHBP1-207ENST00000597928 PAX4O43316 350 aa9.05□□□□□ -0.96
USHBP1-207ENST00000597928 PIK3CD-AS1Q5SR53 167 aa9.05□□□□□ -0.96
USHBP1-207ENST00000597928 POM121L12Q8N7R1 296 aa9.05□□□□□ -0.96
USHBP1-207ENST00000597928 CARD19Q96LW7 228 aa9.05□□□□□ -0.96
USHBP1-207ENST00000597928 TRAV26-1A0A087WT03 109 aa9.04□□□□□ -0.96
USHBP1-207ENST00000597928 LINC00694P0DN24 101 aa9.04□□□□□ -0.96
USHBP1-207ENST00000597928 DEFB114Q30KQ6 69 aa9.04□□□□□ -0.96
USHBP1-207ENST00000597928 APCP25054 2843 aa9.04□□□□□ -0.96
USHBP1-207ENST00000597928 XCL1P47992 114 aa9.04□□□□□ -0.96
USHBP1-207ENST00000597928 DNAJC9-AS1A6NH13 148 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 TRIAP1O43715 76 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 TEN1Q86WV5 123 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
USHBP1-207ENST00000597928 F8P00451 2351 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 IGHV3-33P01772 117 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 COX6A2Q02221 97 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 LINC01620Q4KN68 170 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 GAGE2EQ4V326 116 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 GAGE2DQ9UEU5 116 aa9.03□□□□□ -0.96
USHBP1-207ENST00000597928 XGP55808 180 aa9.02□□□□□ -0.97
USHBP1-207ENST00000597928 Q9HAA7 133 aa9.02□□□□□ -0.97
USHBP1-207ENST00000597928 IGHV1-58A0A0C4DH39 117 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 J3QLI3 93 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 ICOSQ9Y6W8 199 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 C6orf226Q5I0X4 101 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 ZFAND6Q6FIF0 208 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 EIF4EBP3O60516 100 aaPredicted RBP9.01□□□□□ -0.97
USHBP1-207ENST00000597928 UBE2D1P51668 147 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 FAM19A4Q96LR4 140 aa9.01□□□□□ -0.97
USHBP1-207ENST00000597928 ODF3L2Q3SX64 289 aa9□□□□□ -0.97
USHBP1-207ENST00000597928 UBE2WQ96B02 151 aa9□□□□□ -0.97
USHBP1-207ENST00000597928 DNAL4O96015 105 aa9□□□□□ -0.97
USHBP1-207ENST00000597928 VSIG2Q96IQ7 327 aa9□□□□□ -0.97
USHBP1-207ENST00000597928 TMEM243Q9BU79 118 aa8.99□□□□□ -0.97
USHBP1-207ENST00000597928 ZNF843Q8N446 348 aa8.99□□□□□ -0.97
USHBP1-207ENST00000597928 LINC00482Q8N8I6 264 aa8.99□□□□□ -0.97
USHBP1-207ENST00000597928 C15orf53Q8NAA6 179 aa8.99□□□□□ -0.97
USHBP1-207ENST00000597928 LINC01546A6NGU7 62 aa8.98□□□□□ -0.97
USHBP1-207ENST00000597928 TRBV6-5A0A0K0K1A5 114 aa8.98□□□□□ -0.97
USHBP1-207ENST00000597928 ATP5G1P05496 136 aa8.98□□□□□ -0.97
USHBP1-207ENST00000597928 UBE2D4Q9Y2X8 147 aa8.98□□□□□ -0.97
USHBP1-207ENST00000597928 NBEAL1Q6ZS30 2694 aa8.98□□□□□ -0.97
USHBP1-207ENST00000597928 GAGE2AQ6NT46 116 aa8.98□□□□□ -0.97
USHBP1-207ENST00000597928 TMEM89A2RUT3 159 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 B5MCH6 92 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 SS18L2Q9UHA2 77 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 UNC79Q9P2D8 2635 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 K7EQD1 137 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 CRYBA4P53673 196 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 LINC00526Q96FQ7 95 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 NOTCH1P46531 2555 aa8.97□□□□□ -0.97
USHBP1-207ENST00000597928 MAST4O15021 2626 aa8.96□□□□□ -0.97
USHBP1-207ENST00000597928 C4orf3Q8WVX3 66 aa8.96□□□□□ -0.97
USHBP1-207ENST00000597928 RNF183Q96D59 192 aa8.96□□□□□ -0.97
USHBP1-207ENST00000597928 TMEM263Q8WUH6 116 aaKnown RBP8.96□□□□□ -0.98
USHBP1-207ENST00000597928 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
USHBP1-207ENST00000597928 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.98
USHBP1-207ENST00000597928 TINCRA0A1B0GVN0 87 aa8.96□□□□□ -0.98
USHBP1-207ENST00000597928 CRPP02741 224 aa8.96□□□□□ -0.98
USHBP1-207ENST00000597928 C1orf158Q8N1D5 194 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms