RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 A0A1B0GVY2 172 aa11.53□□□□□ -0.56
SMG9-204ENST00000596714 IFI27P40305 119 aaPredicted RBP11.53□□□□□ -0.56
SMG9-204ENST00000596714 ZNF664Q8N3J9 261 aa11.53□□□□□ -0.56
SMG9-204ENST00000596714 YPEL4Q96NS1 127 aa11.53□□□□□ -0.56
SMG9-204ENST00000596714 SPANXA1Q9NS26 97 aa11.53□□□□□ -0.56
SMG9-204ENST00000596714 UBE2D4Q9Y2X8 147 aa11.53□□□□□ -0.56
SMG9-204ENST00000596714 CDC42SE2Q9NRR3 84 aa11.52□□□□□ -0.57
SMG9-204ENST00000596714 IGLV10-54A0A075B6I4 117 aa11.51□□□□□ -0.57
SMG9-204ENST00000596714 RPL39P62891 51 aaKnown RBP11.51□□□□□ -0.57
SMG9-204ENST00000596714 CYSLTR1Q9Y271 337 aa11.51□□□□□ -0.57
SMG9-204ENST00000596714 FAT2Q9NYQ8 4349 aa11.5□□□□□ -0.57
SMG9-204ENST00000596714 FA2HQ7L5A8 372 aa11.5□□□□□ -0.57
SMG9-204ENST00000596714 SPATA12Q7Z6I5 190 aa11.5□□□□□ -0.57
SMG9-204ENST00000596714 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
SMG9-204ENST00000596714 SS18Q15532 418 aa11.49□□□□□ -0.57
SMG9-204ENST00000596714 C14orf177Q52M58 125 aa11.48□□□□□ -0.57
SMG9-204ENST00000596714 C2orf66Q6UXQ4 117 aa11.48□□□□□ -0.57
SMG9-204ENST00000596714 BAALCQ8WXS3 180 aa11.48□□□□□ -0.57
SMG9-204ENST00000596714 PGPEP1Q9NXJ5 209 aa11.48□□□□□ -0.57
SMG9-204ENST00000596714 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 CCL25O15444 150 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 CDPF1Q6NVV7 123 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 Q8N814 137 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 MAPKAPK5-AS1Q8N8E1 139 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 PYGO1Q9Y3Y4 419 aa11.47□□□□□ -0.57
SMG9-204ENST00000596714 LINC00959A0A1B0GUT2 108 aa11.46□□□□□ -0.57
SMG9-204ENST00000596714 LECT2O14960 151 aa11.46□□□□□ -0.57
SMG9-204ENST00000596714 RAB5BP61020 215 aa11.46□□□□□ -0.57
SMG9-204ENST00000596714 MRPS36P82909 103 aaKnown RBP11.46□□□□□ -0.57
SMG9-204ENST00000596714 Q6ZUT4 128 aa11.46□□□□□ -0.57
SMG9-204ENST00000596714 NTN5Q8WTR8 489 aaPredicted RBP11.46□□□□□ -0.57
SMG9-204ENST00000596714 CHCHD10Q8WYQ3 142 aaPredicted RBP11.46□□□□□ -0.57
SMG9-204ENST00000596714 EPPK1P58107 5090 aaKnown RBP11.46□□□□□ -0.58
SMG9-204ENST00000596714 C1orf196B1AJZ1 125 aa11.45□□□□□ -0.58
SMG9-204ENST00000596714 Q6ZN92 141 aa11.45□□□□□ -0.58
SMG9-204ENST00000596714 C18orf32Q8TCD1 76 aa11.45□□□□□ -0.58
SMG9-204ENST00000596714 AP5S1Q9NUS5 200 aa11.45□□□□□ -0.58
SMG9-204ENST00000596714 GAGE12HA6NDE8 117 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 LINC01546A6NGU7 62 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 NPSP0C0P6 89 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 XCL1P47992 114 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
SMG9-204ENST00000596714 PAPPA-AS1Q5QFB9 102 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 PKD1P98161 4303 aa11.44□□□□□ -0.58
SMG9-204ENST00000596714 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 S100A1P23297 94 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 CFAP161Q6P656 301 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 KRTAP26-1Q6PEX3 210 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 TOMM6Q96B49 74 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 TMEM141Q96I45 108 aa11.43□□□□□ -0.58
SMG9-204ENST00000596714 IGLV5-52A0A0A0MRZ9 124 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 IFITM10A6NMD0 228 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 COLCA2A8K830 154 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 TRGC2P03986 189 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 LINC00614P0C842 121 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 KRTAP10-2P60368 255 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 WFDC2Q14508 124 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 TEX43Q6ZNM6 134 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 C2orf88Q9BSF0 95 aa11.42□□□□□ -0.58
SMG9-204ENST00000596714 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
SMG9-204ENST00000596714 SCO1O75880 301 aa11.41□□□□□ -0.58
SMG9-204ENST00000596714 CD164L2Q6UWJ8 174 aa11.41□□□□□ -0.58
SMG9-204ENST00000596714 SCGB3A1Q96QR1 104 aa11.41□□□□□ -0.58
SMG9-204ENST00000596714 TIMM17AQ99595 171 aa11.41□□□□□ -0.58
SMG9-204ENST00000596714 OPRPNQ99935 248 aaPredicted RBP11.41□□□□□ -0.58
SMG9-204ENST00000596714 VCX2Q9H322 139 aa11.41□□□□□ -0.58
SMG9-204ENST00000596714 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.39□□□□□ -0.59
SMG9-204ENST00000596714 IGIPA6NJ69 53 aa11.39□□□□□ -0.59
SMG9-204ENST00000596714 ERASQ7Z444 233 aa11.39□□□□□ -0.59
SMG9-204ENST00000596714 ATP6V1G1O75348 118 aa11.38□□□□□ -0.59
SMG9-204ENST00000596714 FOXI1Q12951 378 aa11.38□□□□□ -0.59
SMG9-204ENST00000596714 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
SMG9-204ENST00000596714 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
SMG9-204ENST00000596714 FAM104AQ969W3 186 aa11.37□□□□□ -0.59
SMG9-204ENST00000596714 CHCHD1Q96BP2 118 aaKnown RBP11.37□□□□□ -0.59
SMG9-204ENST00000596714 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
SMG9-204ENST00000596714 COX7A2LO14548 114 aa11.36□□□□□ -0.59
SMG9-204ENST00000596714 HBDP02042 147 aa11.36□□□□□ -0.59
SMG9-204ENST00000596714 MALP21145 153 aa11.36□□□□□ -0.59
SMG9-204ENST00000596714 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
SMG9-204ENST00000596714 GCSHP23434 173 aa11.35□□□□□ -0.59
SMG9-204ENST00000596714 FUSP35637 526 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMG9-204ENST00000596714 URB1-AS1Q96HZ7 61 aa11.35□□□□□ -0.59
SMG9-204ENST00000596714 AMELXQ99217 191 aa11.35□□□□□ -0.59
SMG9-204ENST00000596714 PKHD1P08F94 4074 aa11.35□□□□□ -0.59
SMG9-204ENST00000596714 IGHV1-58A0A0C4DH39 117 aa11.34□□□□□ -0.59
SMG9-204ENST00000596714 PRSS1P07477 247 aa11.34□□□□□ -0.59
SMG9-204ENST00000596714 SEC11AP67812 179 aa11.34□□□□□ -0.59
SMG9-204ENST00000596714 APOMO95445 188 aa11.33□□□□□ -0.6
SMG9-204ENST00000596714 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.32□□□□□ -0.6
SMG9-204ENST00000596714 HSBP1O75506 76 aa11.32□□□□□ -0.6
SMG9-204ENST00000596714 UBE2D1P51668 147 aa11.32□□□□□ -0.6
SMG9-204ENST00000596714 PMCHL1Q16048 86 aa11.32□□□□□ -0.6
SMG9-204ENST00000596714 C15orf56Q8N910 161 aa11.32□□□□□ -0.6
SMG9-204ENST00000596714 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
SMG9-204ENST00000596714 ATP5LO75964 103 aa11.31□□□□□ -0.6
SMG9-204ENST00000596714 HIGD2BQ4VC39 106 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms