RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 AMMECR1LQ6DCA0 310 aa10.09□□□□□ -0.79
SHKBP1-211ENST00000595945 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
SHKBP1-211ENST00000595945 CDC42SE2Q9NRR3 84 aa10.09□□□□□ -0.79
SHKBP1-211ENST00000595945 A0A087WX48 190 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 PKIAP61925 76 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 RBX1P62877 108 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 PMVKQ15126 192 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 PAPPA-AS1Q5QFB9 102 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 OR5A1Q8NGJ0 315 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 CST9LQ9H4G1 147 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 KLK5Q9Y337 293 aaPredicted RBP10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
SHKBP1-211ENST00000595945 IGLV4-60A0A075B6I1 120 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 PRSS29PA6NIE9 313 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 MPV17L2Q567V2 206 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 ZC2HC1BQ5TFG8 222 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 TMEM101Q96IK0 257 aa10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 MRPS16Q9Y3D3 137 aaKnown RBP10.07□□□□□ -0.8
SHKBP1-211ENST00000595945 H0Y8G0 127 aa10.06□□□□□ -0.8
SHKBP1-211ENST00000595945 SCGB1D1O95968 90 aa10.06□□□□□ -0.8
SHKBP1-211ENST00000595945 TCTAP57738 103 aa10.06□□□□□ -0.8
SHKBP1-211ENST00000595945 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
SHKBP1-211ENST00000595945 VCX2Q9H322 139 aa10.06□□□□□ -0.8
SHKBP1-211ENST00000595945 LINC00588Q9Y4M8 146 aa10.06□□□□□ -0.8
SHKBP1-211ENST00000595945 C20orf202A1L168 122 aa10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 SMIM6P0DI80 62 aa10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 RNASE13Q5GAN3 156 aaKnown RBP10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 TEX43Q6ZNM6 134 aa10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 WFDC10BQ8IUB3 73 aa10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 Q8N3U1 123 aa10.05□□□□□ -0.8
SHKBP1-211ENST00000595945 IGLV4-69A0A075B6H9 119 aa10.04□□□□□ -0.8
SHKBP1-211ENST00000595945 MUC7Q8TAX7 377 aa10.04□□□□□ -0.8
SHKBP1-211ENST00000595945 WWC2-AS2Q96NR7 200 aa10.04□□□□□ -0.8
SHKBP1-211ENST00000595945 PMCHL2Q9BQD1 86 aa10.04□□□□□ -0.8
SHKBP1-211ENST00000595945 UPK3BQ9BT76 320 aa10.04□□□□□ -0.8
SHKBP1-211ENST00000595945 MRPL35Q9NZE8 188 aaKnown RBP10.04□□□□□ -0.8
SHKBP1-211ENST00000595945 F8VRH5 84 aa10.03□□□□□ -0.8
SHKBP1-211ENST00000595945 CCL18P55774 89 aa10.03□□□□□ -0.8
SHKBP1-211ENST00000595945 CDPF1Q6NVV7 123 aa10.03□□□□□ -0.8
SHKBP1-211ENST00000595945 CHTOPQ9Y3Y2 248 aaKnown RBP10.03□□□□□ -0.8
SHKBP1-211ENST00000595945 VPS13DQ5THJ4 4388 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 IGLC3P0DOY3 106 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 UBE2D1P51668 147 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 FAM19A3Q7Z5A8 133 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 NFE4Q86UQ8 179 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 C2orf88Q9BSF0 95 aa10.02□□□□□ -0.81
SHKBP1-211ENST00000595945 DPM2O94777 84 aa10.01□□□□□ -0.81
SHKBP1-211ENST00000595945 DNAH10OSP0CZ25 163 aa10.01□□□□□ -0.81
SHKBP1-211ENST00000595945 LINC01556Q5JQF7 62 aa10.01□□□□□ -0.81
SHKBP1-211ENST00000595945 A0A0J9YXV3 536 aa10□□□□□ -0.81
SHKBP1-211ENST00000595945 IGKCP01834 107 aa10□□□□□ -0.81
SHKBP1-211ENST00000595945 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
SHKBP1-211ENST00000595945 PLNP26678 52 aa9.99□□□□□ -0.81
SHKBP1-211ENST00000595945 LINC00518Q8N0U6 118 aa9.99□□□□□ -0.81
SHKBP1-211ENST00000595945 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
SHKBP1-211ENST00000595945 PRR34Q9NV39 138 aa9.99□□□□□ -0.81
SHKBP1-211ENST00000595945 TINCRA0A1B0GVN0 87 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 SIVA1O15304 175 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 IGHV3-30P01768 117 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 IGHV3-33P01772 117 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 IGHV3-30-5P0DP03 117 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 LINC00269Q8N2A0 174 aa9.98□□□□□ -0.81
SHKBP1-211ENST00000595945 TRAV13-1A0A0B4J241 112 aa9.97□□□□□ -0.81
SHKBP1-211ENST00000595945 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
SHKBP1-211ENST00000595945 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
SHKBP1-211ENST00000595945 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
SHKBP1-211ENST00000595945 IGLV5-45A0A087WSX0 123 aa9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 TRAV9-2A0A087WT02 112 aa9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 CCL25O15444 150 aa9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 ZNF22P17026 224 aaPredicted RBP9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 REG3AQ06141 175 aa9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 ENHOQ6UWT2 76 aa9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 C12orf57Q99622 126 aa9.96□□□□□ -0.82
SHKBP1-211ENST00000595945 SEC11AP67812 179 aa9.95□□□□□ -0.82
SHKBP1-211ENST00000595945 COX6A2Q02221 97 aa9.95□□□□□ -0.82
SHKBP1-211ENST00000595945 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
SHKBP1-211ENST00000595945 Q9H8V8 135 aa9.95□□□□□ -0.82
SHKBP1-211ENST00000595945 IGKV3OR2-268A0A0C4DH90 116 aa9.94□□□□□ -0.82
SHKBP1-211ENST00000595945 hDV102S1A0JD36 115 aa9.94□□□□□ -0.82
SHKBP1-211ENST00000595945 C3orf84H3BNL1 204 aa9.94□□□□□ -0.82
SHKBP1-211ENST00000595945 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
SHKBP1-211ENST00000595945 UBE2DNLQ8IWF7 75 aa9.94□□□□□ -0.82
SHKBP1-211ENST00000595945 HERVK_113P63121 156 aa9.93□□□□□ -0.82
SHKBP1-211ENST00000595945 SS18Q15532 418 aa9.93□□□□□ -0.82
SHKBP1-211ENST00000595945 STPG4Q8N801 248 aa9.93□□□□□ -0.82
SHKBP1-211ENST00000595945 VAMP8Q9BV40 100 aa9.93□□□□□ -0.82
SHKBP1-211ENST00000595945 DNAH1Q9P2D7 4330 aa9.93□□□□□ -0.82
SHKBP1-211ENST00000595945 IGHV3OR16-9A0A0B4J2B5 98 aa9.92□□□□□ -0.82
SHKBP1-211ENST00000595945 IBA57-AS1B1ANH7 110 aa9.92□□□□□ -0.82
SHKBP1-211ENST00000595945 ANKRD39Q53RE8 183 aa9.92□□□□□ -0.82
SHKBP1-211ENST00000595945 CASC10Q5T4H9 136 aa9.92□□□□□ -0.82
SHKBP1-211ENST00000595945 UBE2WQ96B02 151 aa9.92□□□□□ -0.82
SHKBP1-211ENST00000595945 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms