RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.52□□□□□ -0.89
VRK3-209ENST00000594948 Q9H8V8 135 aa9.52□□□□□ -0.89
VRK3-209ENST00000594948 ZFHX3Q15911 3703 aa9.52□□□□□ -0.89
VRK3-209ENST00000594948 PRM2P04554 102 aa9.52□□□□□ -0.89
VRK3-209ENST00000594948 COX6A2Q02221 97 aa9.52□□□□□ -0.89
VRK3-209ENST00000594948 DYNLRB2Q8TF09 96 aa9.52□□□□□ -0.89
VRK3-209ENST00000594948 SORL1Q92673 2214 aa9.51□□□□□ -0.89
VRK3-209ENST00000594948 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
VRK3-209ENST00000594948 TRACP01848 142 aa9.51□□□□□ -0.89
VRK3-209ENST00000594948 DEFB114Q30KQ6 69 aa9.51□□□□□ -0.89
VRK3-209ENST00000594948 TRAV25A0A0B4J276 109 aa9.5□□□□□ -0.89
VRK3-209ENST00000594948 RPL36AP83881 106 aaKnown RBP9.5□□□□□ -0.89
VRK3-209ENST00000594948 DAZ2Q13117 558 aaKnown RBP9.5□□□□□ -0.89
VRK3-209ENST00000594948 DAZ4Q86SG3 579 aaKnown RBP9.5□□□□□ -0.89
VRK3-209ENST00000594948 RPL36ALQ969Q0 106 aaKnown RBP9.5□□□□□ -0.89
VRK3-209ENST00000594948 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
VRK3-209ENST00000594948 DAZ3Q9NR90 486 aaKnown RBP9.5□□□□□ -0.89
VRK3-209ENST00000594948 SVEP1Q4LDE5 3571 aa9.5□□□□□ -0.89
VRK3-209ENST00000594948 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
VRK3-209ENST00000594948 C18orf65Q6ZTR6 163 aa9.49□□□□□ -0.89
VRK3-209ENST00000594948 DAND5Q8N907 189 aa9.49□□□□□ -0.89
VRK3-209ENST00000594948 IMUPQ9GZP8 106 aa9.49□□□□□ -0.89
VRK3-209ENST00000594948 B5MCH6 92 aa9.48□□□□□ -0.89
VRK3-209ENST00000594948 K7EQD1 137 aa9.48□□□□□ -0.89
VRK3-209ENST00000594948 PF4P02776 101 aa9.48□□□□□ -0.89
VRK3-209ENST00000594948 CR1P17927 2039 aa9.48□□□□□ -0.89
VRK3-209ENST00000594948 F5H768 121 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 CSPG4Q6UVK1 2322 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 IGHV4-31P0DP07 118 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 SS18L2Q9UHA2 77 aa9.47□□□□□ -0.89
VRK3-209ENST00000594948 PIEZO1Q92508 2521 aa9.46□□□□□ -0.89
VRK3-209ENST00000594948 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
VRK3-209ENST00000594948 NTM-AS1Q6ZSK4 140 aa9.46□□□□□ -0.9
VRK3-209ENST00000594948 PRIMA1Q86XR5 153 aa9.46□□□□□ -0.9
VRK3-209ENST00000594948 C1orf158Q8N1D5 194 aa9.46□□□□□ -0.9
VRK3-209ENST00000594948 CCDC179H3BU77 68 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 ODF3L2Q3SX64 289 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 MEIG1Q5JSS6 88 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 TRGV1A0A0A0MS02 117 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 SDIM1Q6ZPB5 146 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 STHQ8IWL8 128 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 NRGNQ92686 78 aa9.45□□□□□ -0.9
VRK3-209ENST00000594948 LINC00643Q86TS7 51 aa9.44□□□□□ -0.9
VRK3-209ENST00000594948 XCL2Q9UBD3 114 aa9.44□□□□□ -0.9
VRK3-209ENST00000594948 TRAV13-2A0A0B4J235 113 aa9.43□□□□□ -0.9
VRK3-209ENST00000594948 RPL28P46779 137 aaKnown RBP9.43□□□□□ -0.9
VRK3-209ENST00000594948 OVOL2Q9BRP0 275 aa9.43□□□□□ -0.9
VRK3-209ENST00000594948 CELSR1Q9NYQ6 3014 aa9.43□□□□□ -0.9
VRK3-209ENST00000594948 TRAV13-1A0A0B4J241 112 aa9.42□□□□□ -0.9
VRK3-209ENST00000594948 HIST2H2BCQ6DN03 193 aa9.42□□□□□ -0.9
VRK3-209ENST00000594948 HIST2H2BDQ6DRA6 164 aa9.42□□□□□ -0.9
VRK3-209ENST00000594948 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
VRK3-209ENST00000594948 INAFM2P0DMQ5 153 aa9.42□□□□□ -0.9
VRK3-209ENST00000594948 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
VRK3-209ENST00000594948 TMEM243Q9BU79 118 aa9.42□□□□□ -0.9
VRK3-209ENST00000594948 BAALC-AS2P0C853 105 aa9.41□□□□□ -0.9
VRK3-209ENST00000594948 MAPK1IP1LQ8NDC0 245 aa9.41□□□□□ -0.9
VRK3-209ENST00000594948 DOPEY1Q5JWR5 2465 aa9.4□□□□□ -0.9
VRK3-209ENST00000594948 UBE2L6O14933 153 aa9.4□□□□□ -0.9
VRK3-209ENST00000594948 NDUFA7O95182 113 aa9.4□□□□□ -0.9
VRK3-209ENST00000594948 KHDC1LQ5JSQ8 128 aa9.4□□□□□ -0.9
VRK3-209ENST00000594948 Q6ZTI0 123 aa9.4□□□□□ -0.9
VRK3-209ENST00000594948 A0A0U1RRA0 63 aa9.4□□□□□ -0.91
VRK3-209ENST00000594948 ATP5G1P05496 136 aa9.4□□□□□ -0.91
VRK3-209ENST00000594948 CRPP02741 224 aa9.39□□□□□ -0.91
VRK3-209ENST00000594948 CXCL5P42830 114 aa9.39□□□□□ -0.91
VRK3-209ENST00000594948 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
VRK3-209ENST00000594948 Q96MF0 132 aa9.39□□□□□ -0.91
VRK3-209ENST00000594948 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
VRK3-209ENST00000594948 ITPR1Q14643 2758 aa9.39□□□□□ -0.91
VRK3-209ENST00000594948 LRRC75A-AS1Q8N1F1 130 aa9.38□□□□□ -0.91
VRK3-209ENST00000594948 TRBV6-4A0A1B0GX49 114 aa9.38□□□□□ -0.91
VRK3-209ENST00000594948 C16orf74Q96GX8 76 aa9.38□□□□□ -0.91
VRK3-209ENST00000594948 SMCR5Q8TEV8 140 aa9.37□□□□□ -0.91
VRK3-209ENST00000594948 FAM218AQ96MZ4 157 aa9.37□□□□□ -0.91
VRK3-209ENST00000594948 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
VRK3-209ENST00000594948 MALP21145 153 aa9.36□□□□□ -0.91
VRK3-209ENST00000594948 SPTBN4Q9H254 2564 aa9.36□□□□□ -0.91
VRK3-209ENST00000594948 NCOR2Q9Y618 2525 aa9.36□□□□□ -0.91
VRK3-209ENST00000594948 VPS13CQ709C8 3753 aa9.36□□□□□ -0.91
VRK3-209ENST00000594948 H0YGX0 51 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 FAM110AQ9BQ89 295 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 SPG11Q96JI7 2443 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 FAM236AA0A1B0GUQ0 79 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 FAM236BA0A1B0GV22 79 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 IBA57-AS1B1ANH7 110 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 C5orf38Q86SI9 138 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
VRK3-209ENST00000594948 ANKRD17O75179 2603 aaKnown RBP9.34□□□□□ -0.91
VRK3-209ENST00000594948 IGKV2-28A0A075B6P5 120 aa9.34□□□□□ -0.91
VRK3-209ENST00000594948 PLAC8L1A1L4L8 177 aa9.34□□□□□ -0.91
VRK3-209ENST00000594948 IGKV2D-28P01615 120 aa9.34□□□□□ -0.91
VRK3-209ENST00000594948 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
VRK3-209ENST00000594948 NOP10Q9NPE3 64 aaKnown RBP9.34□□□□□ -0.91
VRK3-209ENST00000594948 CCL24O00175 119 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms