RNA–Protein interactions for RNA: ENST00000594399.1

USE1-204, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-204ENST00000594399 NUPR1O60356 82 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 ANGP03950 147 aaKnown RBP7.36□□□□□ -1.23
USE1-204ENST00000594399 TTC32Q5I0X7 151 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 FAM19A2Q8N3H0 131 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 C10orf126Q8N4M7 172 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 TIMM17AQ99595 171 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 PYGO1Q9Y3Y4 419 aa7.36□□□□□ -1.23
USE1-204ENST00000594399 TRAV9-2A0A087WT02 112 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 IGIPA6NJ69 53 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 NPSP0C0P6 89 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 PDZD11Q5EBL8 140 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 Q6ZUT4 128 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 ERASQ7Z444 233 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 TMEM141Q96I45 108 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 SCGB3A1Q96QR1 104 aa7.35□□□□□ -1.23
USE1-204ENST00000594399 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
USE1-204ENST00000594399 IGLV4-3A0A075B6K6 122 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 NBDYA0A0U1RRE5 68 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 ATP5LO75964 103 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 CRPP02741 224 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 MRPS36P82909 103 aaKnown RBP7.34□□□□□ -1.23
USE1-204ENST00000594399 Q6ZN92 141 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 CDC42SE2Q9NRR3 84 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 KLK12Q9UKR0 248 aa7.34□□□□□ -1.23
USE1-204ENST00000594399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.33□□□□□ -1.24
USE1-204ENST00000594399 LEPROTL1O95214 131 aa7.33□□□□□ -1.24
USE1-204ENST00000594399 RNASE13Q5GAN3 156 aaKnown RBP7.33□□□□□ -1.24
USE1-204ENST00000594399 PAPPA-AS1Q5QFB9 102 aa7.33□□□□□ -1.24
USE1-204ENST00000594399 CLPSL2Q6UWE3 100 aa7.33□□□□□ -1.24
USE1-204ENST00000594399 LINC00269Q8N2A0 174 aa7.33□□□□□ -1.24
USE1-204ENST00000594399 ZNF664Q8N3J9 261 aa7.33□□□□□ -1.24
USE1-204ENST00000594399 OPRPNQ99935 248 aaPredicted RBP7.33□□□□□ -1.24
USE1-204ENST00000594399 HSPB8Q9UJY1 196 aa7.33□□□□□ -1.24
USE1-204ENST00000594399 REG3AQ06141 175 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 TEX43Q6ZNM6 134 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 HIST3H2BBQ8N257 126 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 FAM104AQ969W3 186 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 UBE2WQ96B02 151 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 PACRGQ96M98 296 aaPredicted RBP7.32□□□□□ -1.24
USE1-204ENST00000594399 KRTAP1-5Q9BYS1 174 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 PRR34Q9NV39 138 aa7.32□□□□□ -1.24
USE1-204ENST00000594399 HYDINQ4G0P3 5121 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 C5orf52A6NGY3 159 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 IFITM10A6NMD0 228 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 IBA57-AS1B1ANH7 110 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 FABP4P15090 132 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 S100A2P29034 98 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
USE1-204ENST00000594399 BAALCQ8WXS3 180 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 IFI27L1Q96BM0 104 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 C2orf88Q9BSF0 95 aa7.31□□□□□ -1.24
USE1-204ENST00000594399 TRAV8-3A0A0A6YYJ7 113 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 IGKV3OR2-268A0A0C4DH90 116 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 M0R2N4 97 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 MIAQ16674 131 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 ENHOQ6UWT2 76 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 LINC00173Q6ZV60 143 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 AMELXQ99217 191 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 VCX2Q9H322 139 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 Q9HAA7 133 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 KMT2AQ03164 3969 aa7.3□□□□□ -1.24
USE1-204ENST00000594399 PMVKQ15126 192 aa7.29□□□□□ -1.24
USE1-204ENST00000594399 ZC2HC1BQ5TFG8 222 aa7.29□□□□□ -1.24
USE1-204ENST00000594399 Q6ZR54 194 aa7.29□□□□□ -1.24
USE1-204ENST00000594399 HIST1H2BLQ99880 126 aa7.29□□□□□ -1.24
USE1-204ENST00000594399 TRAV13-1A0A0B4J241 112 aa7.28□□□□□ -1.24
USE1-204ENST00000594399 TRAV8-4A0A0B4J246 113 aa7.28□□□□□ -1.24
USE1-204ENST00000594399 LINC00959A0A1B0GUT2 108 aa7.28□□□□□ -1.24
USE1-204ENST00000594399 PRSS1P07477 247 aa7.28□□□□□ -1.24
USE1-204ENST00000594399 RMI2Q96E14 147 aa7.28□□□□□ -1.24
USE1-204ENST00000594399 MAP1LC3CQ9BXW4 147 aa7.28□□□□□ -1.24
USE1-204ENST00000594399 IGLV10-54A0A075B6I4 117 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 IGKV2D-24A0A075B6R9 120 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 H0Y8G0 127 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 CCL25O15444 150 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 UBE2D1P51668 147 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 SS18Q15532 418 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 NFE4Q86UQ8 179 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 C1orf43Q9BWL3 253 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 CST9LQ9H4G1 147 aa7.27□□□□□ -1.25
USE1-204ENST00000594399 PRSS29PA6NIE9 313 aa7.26□□□□□ -1.25
USE1-204ENST00000594399 C6orf223Q8N319 242 aa7.26□□□□□ -1.25
USE1-204ENST00000594399 CHCHD10Q8WYQ3 142 aaPredicted RBP7.26□□□□□ -1.25
USE1-204ENST00000594399 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
USE1-204ENST00000594399 EPPK1P58107 5090 aaKnown RBP7.25□□□□□ -1.25
USE1-204ENST00000594399 XCL1P47992 114 aa7.25□□□□□ -1.25
USE1-204ENST00000594399 KRTDAPP60985 99 aa7.25□□□□□ -1.25
USE1-204ENST00000594399 SEC11AP67812 179 aa7.25□□□□□ -1.25
USE1-204ENST00000594399 FAM19A3Q7Z5A8 133 aa7.25□□□□□ -1.25
USE1-204ENST00000594399 TM2D2Q9BX73 214 aa7.25□□□□□ -1.25
USE1-204ENST00000594399 CHTOPQ9Y3Y2 248 aaKnown RBP7.25□□□□□ -1.25
USE1-204ENST00000594399 COX11Q9Y6N1 276 aa7.25□□□□□ -1.25
USE1-204ENST00000594399 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
USE1-204ENST00000594399 GAGE12HA6NDE8 117 aa7.24□□□□□ -1.25
USE1-204ENST00000594399 F8VRH5 84 aa7.24□□□□□ -1.25
USE1-204ENST00000594399 SYS1-DBNDD2H3BUS1 97 aa7.24□□□□□ -1.25
USE1-204ENST00000594399 C3orf79P0CE67 100 aa7.24□□□□□ -1.25
USE1-204ENST00000594399 ODF1Q14990 250 aa7.24□□□□□ -1.25
USE1-204ENST00000594399 LINC00242Q5T6M2 205 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms