RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 IGLV10-54A0A075B6I4 117 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 TRAV8-4A0A0B4J246 113 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 K7EMI3 77 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 RPL39P62891 51 aaKnown RBP9.92□□□□□ -0.82
DDX39A-221ENST00000593026 ORMDL2Q53FV1 153 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 PRSS3P2Q8NHM4 247 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 CDC42SE2Q9NRR3 84 aa9.92□□□□□ -0.82
DDX39A-221ENST00000593026 CSDC2Q9Y534 153 aaKnown RBP9.92□□□□□ -0.82
DDX39A-221ENST00000593026 LRCOL1A6NCL2 159 aa9.91□□□□□ -0.82
DDX39A-221ENST00000593026 ATP6V1G1O75348 118 aa9.91□□□□□ -0.82
DDX39A-221ENST00000593026 ZNF664Q8N3J9 261 aa9.91□□□□□ -0.82
DDX39A-221ENST00000593026 MAPKAPK5-AS1Q8N8E1 139 aa9.91□□□□□ -0.82
DDX39A-221ENST00000593026 SPANXA1Q9NS26 97 aa9.91□□□□□ -0.82
DDX39A-221ENST00000593026 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.82
DDX39A-221ENST00000593026 BAALCQ8WXS3 180 aa9.9□□□□□ -0.82
DDX39A-221ENST00000593026 LECT2O14960 151 aa9.89□□□□□ -0.83
DDX39A-221ENST00000593026 Q6ZUT4 128 aa9.89□□□□□ -0.83
DDX39A-221ENST00000593026 CYSLTR1Q9Y271 337 aa9.89□□□□□ -0.83
DDX39A-221ENST00000593026 HECTD4Q9Y4D8 3996 aa9.89□□□□□ -0.83
DDX39A-221ENST00000593026 WFDC2Q14508 124 aa9.88□□□□□ -0.83
DDX39A-221ENST00000593026 KRTAP26-1Q6PEX3 210 aa9.88□□□□□ -0.83
DDX39A-221ENST00000593026 C2orf66Q6UXQ4 117 aa9.88□□□□□ -0.83
DDX39A-221ENST00000593026 FA2HQ7L5A8 372 aa9.88□□□□□ -0.83
DDX39A-221ENST00000593026 LINC00959A0A1B0GUT2 108 aa9.87□□□□□ -0.83
DDX39A-221ENST00000593026 SCO1O75880 301 aa9.87□□□□□ -0.83
DDX39A-221ENST00000593026 G0S2P27469 103 aa9.87□□□□□ -0.83
DDX39A-221ENST00000593026 RNASE13Q5GAN3 156 aaKnown RBP9.87□□□□□ -0.83
DDX39A-221ENST00000593026 Q8N814 137 aa9.87□□□□□ -0.83
DDX39A-221ENST00000593026 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
DDX39A-221ENST00000593026 CHCHD10Q8WYQ3 142 aaPredicted RBP9.87□□□□□ -0.83
DDX39A-221ENST00000593026 LINC01546A6NGU7 62 aa9.86□□□□□ -0.83
DDX39A-221ENST00000593026 KRTAP10-2P60368 255 aa9.86□□□□□ -0.83
DDX39A-221ENST00000593026 MRPS36P82909 103 aaKnown RBP9.86□□□□□ -0.83
DDX39A-221ENST00000593026 SS18Q15532 418 aa9.86□□□□□ -0.83
DDX39A-221ENST00000593026 PYGO1Q9Y3Y4 419 aa9.86□□□□□ -0.83
DDX39A-221ENST00000593026 PKD1P98161 4303 aa9.86□□□□□ -0.83
DDX39A-221ENST00000593026 GAGE12HA6NDE8 117 aa9.85□□□□□ -0.83
DDX39A-221ENST00000593026 COLCA2A8K830 154 aa9.85□□□□□ -0.83
DDX39A-221ENST00000593026 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
DDX39A-221ENST00000593026 PGPEP1Q9NXJ5 209 aa9.85□□□□□ -0.83
DDX39A-221ENST00000593026 TRAV13-1A0A0B4J241 112 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 USP17L23D6RBM5 183 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 CCL25O15444 150 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 XCL1P47992 114 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 CDPF1Q6NVV7 123 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 FAM104AQ969W3 186 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 AP5S1Q9NUS5 200 aa9.84□□□□□ -0.83
DDX39A-221ENST00000593026 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
DDX39A-221ENST00000593026 C1orf196B1AJZ1 125 aa9.83□□□□□ -0.84
DDX39A-221ENST00000593026 TRGC2P03986 189 aa9.83□□□□□ -0.84
DDX39A-221ENST00000593026 FUSP35637 526 aaKnown RBP eCLIP9.83□□□□□ -0.84
DDX39A-221ENST00000593026 C14orf177Q52M58 125 aa9.83□□□□□ -0.84
DDX39A-221ENST00000593026 NTN5Q8WTR8 489 aaPredicted RBP9.83□□□□□ -0.84
DDX39A-221ENST00000593026 TOMM6Q96B49 74 aa9.83□□□□□ -0.84
DDX39A-221ENST00000593026 TMEM141Q96I45 108 aa9.83□□□□□ -0.84
DDX39A-221ENST00000593026 LINC01549A6NIU2 74 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 IFITM10A6NMD0 228 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 NPSP0C0P6 89 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 LINC00614P0C842 121 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 S100A1P23297 94 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 RAB5BP61020 215 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 Q6ZN92 141 aa9.82□□□□□ -0.84
DDX39A-221ENST00000593026 DNAH11Q96DT5 4516 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.81□□□□□ -0.84
DDX39A-221ENST00000593026 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 IGIPA6NJ69 53 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 FOXI1Q12951 378 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 TEX43Q6ZNM6 134 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 URB1-AS1Q96HZ7 61 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 TIMM17AQ99595 171 aa9.81□□□□□ -0.84
DDX39A-221ENST00000593026 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
DDX39A-221ENST00000593026 ERASQ7Z444 233 aa9.8□□□□□ -0.84
DDX39A-221ENST00000593026 SCGB3A1Q96QR1 104 aa9.8□□□□□ -0.84
DDX39A-221ENST00000593026 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
DDX39A-221ENST00000593026 C2orf88Q9BSF0 95 aa9.79□□□□□ -0.84
DDX39A-221ENST00000593026 VCX2Q9H322 139 aa9.79□□□□□ -0.84
DDX39A-221ENST00000593026 PKHD1P08F94 4074 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 A0A096LNJ9 63 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 HBDP02042 147 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 PRSS1P07477 247 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 ZC2HC1BQ5TFG8 222 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 LINC00173Q6ZV60 143 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 BAGE3Q86Y29 109 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 C15orf56Q8N910 161 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 CHCHD1Q96BP2 118 aaKnown RBP9.77□□□□□ -0.85
DDX39A-221ENST00000593026 AMELXQ99217 191 aa9.77□□□□□ -0.85
DDX39A-221ENST00000593026 hDV102S1A0JD36 115 aa9.76□□□□□ -0.85
DDX39A-221ENST00000593026 COX7A2LO14548 114 aa9.76□□□□□ -0.85
DDX39A-221ENST00000593026 GCSHP23434 173 aa9.76□□□□□ -0.85
DDX39A-221ENST00000593026 PMCHL1Q16048 86 aa9.76□□□□□ -0.85
DDX39A-221ENST00000593026 IGHV1-58A0A0C4DH39 117 aa9.75□□□□□ -0.85
DDX39A-221ENST00000593026 MALP21145 153 aa9.75□□□□□ -0.85
DDX39A-221ENST00000593026 UBE2D1P51668 147 aa9.75□□□□□ -0.85
DDX39A-221ENST00000593026 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.74□□□□□ -0.85
DDX39A-221ENST00000593026 HIGD2BQ4VC39 106 aa9.74□□□□□ -0.85
DDX39A-221ENST00000593026 LINC00242Q5T6M2 205 aa9.74□□□□□ -0.85
DDX39A-221ENST00000593026 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms