RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 TRGC1P0CF51 173 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 S100PP25815 95 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 POLR2KP53803 58 aaKnown RBP3.11□□□□□ -1.91
ERCC1-216ENST00000592444 FABP9Q0Z7S8 132 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 SUMO4Q6EEV6 95 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 REG3GQ6UW15 175 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 ZFP2Q6ZN57 461 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 AP1S3Q96PC3 154 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 NAGKQ9UJ70 344 aa3.11□□□□□ -1.91
ERCC1-216ENST00000592444 A0A096LPF7 62 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 TRAV26-2A0A0B4J265 109 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 TRBV27A0A0K0K1C4 114 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 LOC105371267A0A1B0GV96 52 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 D6R8Y8 96 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 SMKR1H3BMG3 65 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 NCR2O95944 276 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 SRIP30626 198 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 RIGQ13278 110 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 KIAA1644Q3SXP7 199 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 ZNF876PQ49A33 203 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 OR10J3Q5JRS4 329 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 NIT1Q86X76 327 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 HIST3H2BBQ8N257 126 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 Q8N976 141 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 NEXN-AS1Q8NBZ9 246 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 RPL39LQ96EH5 51 aaKnown RBP3.1□□□□□ -1.91
ERCC1-216ENST00000592444 MRAP2Q96G30 205 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 ZNF479Q96JC4 524 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 PACRGQ96M98 296 aaPredicted RBP3.1□□□□□ -1.91
ERCC1-216ENST00000592444 MRPL16Q9NX20 251 aaKnown RBP3.1□□□□□ -1.91
ERCC1-216ENST00000592444 LAMTOR2Q9Y2Q5 125 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 GOLT1BQ9Y3E0 138 aa3.1□□□□□ -1.91
ERCC1-216ENST00000592444 A8MWV9 139 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 SERF1AO75920 110 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 PPBPP02775 128 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 CAMPP49913 170 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 C14orf178Q8N769 122 aaPredicted RBP3.09□□□□□ -1.91
ERCC1-216ENST00000592444 VSIG2Q96IQ7 327 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 LINC01587Q99440 93 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 SMIM2Q9BVW6 85 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 NOP10Q9NPE3 64 aaKnown RBP3.09□□□□□ -1.91
ERCC1-216ENST00000592444 PHLDA3Q9Y5J5 127 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 TIMM8BQ9Y5J9 83 aaPredicted RBP3.09□□□□□ -1.91
ERCC1-216ENST00000592444 TRAPPC1Q9Y5R8 145 aa3.09□□□□□ -1.91
ERCC1-216ENST00000592444 A0A087WWL8 130 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 C1orf196B1AJZ1 125 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 K7EP13 123 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 RHODO00212 210 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 TNFRSF6BO95407 300 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 TSHBP01222 138 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 APCSP02743 223 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 S100A8P05109 93 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 RAB4BP61018 213 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 UBE2D3P61077 147 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 UBE2D2P62837 147 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 MT1HP80294 61 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 TWIST1Q15672 202 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 PDZD11Q5EBL8 140 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 SPANXN1Q5VSR9 72 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 NTM-AS1Q6ZSK4 140 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 ORMDL3Q8N138 153 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 SLC25A29Q8N8R3 303 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.08□□□□□ -1.92
ERCC1-216ENST00000592444 HIST1H2BLQ99880 126 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 C20orf78Q9BR46 151 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 Q9HAA7 133 aa3.08□□□□□ -1.92
ERCC1-216ENST00000592444 KMT2DO14686 5537 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 TRGV1A0A0A0MS02 117 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 IGHV1-24A0A0C4DH33 117 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 TRBV10-1A0A0K0K1A3 114 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 LOC100131303A0A0U1RQF7 123 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 TRBV6-4A0A1B0GX49 114 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 H3BNG1 76 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 K7EQD1 137 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 S100A4P26447 101 aaKnown RBP3.07□□□□□ -1.92
ERCC1-216ENST00000592444 CRYBA4P53673 196 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 SUMO2P61956 95 aaKnown RBP3.07□□□□□ -1.92
ERCC1-216ENST00000592444 LINC00173Q6ZV60 143 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 PRELID3AQ96N28 172 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 CHCHD7Q9BUK0 85 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 TPPP3Q9BW30 176 aa3.07□□□□□ -1.92
ERCC1-216ENST00000592444 SDHAF1A6NFY7 115 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 H7C1H1 209 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 CIDEAO60543 219 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 GAGE7O76087 117 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 IGKV2-30P06310 120 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 GAGE12FP0CL80 117 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 GAGE12GP0CL81 117 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 GAGE12IP0CL82 117 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 CRYGAP11844 174 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 IFI27P40305 119 aaPredicted RBP3.06□□□□□ -1.92
ERCC1-216ENST00000592444 RAB5BP61020 215 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 SNRPEP62304 92 aaKnown RBP3.06□□□□□ -1.92
ERCC1-216ENST00000592444 C10orf126Q8N4M7 172 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 Q8N8P6 123 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 CHCHD1Q96BP2 118 aaKnown RBP3.06□□□□□ -1.92
ERCC1-216ENST00000592444 NIT2Q9NQR4 276 aa3.06□□□□□ -1.92
ERCC1-216ENST00000592444 TMA7Q9Y2S6 64 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms