RNA–Protein interactions for RNA: ENST00000591893.1

H3F3B-211, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 2,787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-211ENST00000591893 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
H3F3B-211ENST00000591893 NBPF19A0A087WUL8 3843 aa12.9□□□□□ -0.35
H3F3B-211ENST00000591893 ABCA2Q9BZC7 2435 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 DOPEY1Q5JWR5 2465 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 Q9H8V8 135 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 IGLV5-45A0A087WSX0 123 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 A0A0U1RRA0 63 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 NACAE9PAV3 2078 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 ATP5G1P05496 136 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 TIRAPP58753 221 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 Q8N2B8 174 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.89□□□□□ -0.35
H3F3B-211ENST00000591893 LINC00526Q96FQ7 95 aa12.89□□□□□ -0.35
H3F3B-211ENST00000591893 BAALC-AS2P0C853 105 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 RBMY1A1P0DJD3 496 aaKnown RBP12.88□□□□□ -0.35
H3F3B-211ENST00000591893 RBMY1CP0DJD4 496 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 RBMY1FQ15415 496 aaKnown RBP12.88□□□□□ -0.35
H3F3B-211ENST00000591893 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
H3F3B-211ENST00000591893 TRACP01848 142 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 PRB1P04280 392 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 BEAN1Q3B7T3 259 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 Q6ZSN1 163 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 PEMTQ9UBM1 199 aa12.88□□□□□ -0.35
H3F3B-211ENST00000591893 IGHV4-38-2P0DP08 117 aa12.87□□□□□ -0.35
H3F3B-211ENST00000591893 CFHR3Q02985 330 aa12.87□□□□□ -0.35
H3F3B-211ENST00000591893 HERVK_113P63121 156 aa12.87□□□□□ -0.35
H3F3B-211ENST00000591893 NRGNQ92686 78 aa12.87□□□□□ -0.35
H3F3B-211ENST00000591893 CCDC168Q8NDH2 2452 aa12.87□□□□□ -0.35
H3F3B-211ENST00000591893 IGHV3-38A0A0C4DH36 116 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 CXCL5P42830 114 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 SOSTDC1Q6X4U4 206 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 C5orf38Q86SI9 138 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 RNF152Q8N8N0 203 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 COX6A2Q02221 97 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 COPS9Q8WXC6 57 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 CHD6Q8TD26 2715 aa12.86□□□□□ -0.35
H3F3B-211ENST00000591893 FBN2P35556 2912 aa12.85□□□□□ -0.35
H3F3B-211ENST00000591893 C22orf24Q9Y442 160 aa12.85□□□□□ -0.35
H3F3B-211ENST00000591893 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
H3F3B-211ENST00000591893 DGAT2L7PQ6IED9 249 aa12.84□□□□□ -0.35
H3F3B-211ENST00000591893 PRM2P04554 102 aa12.83□□□□□ -0.36
H3F3B-211ENST00000591893 COX7CP15954 63 aa12.83□□□□□ -0.36
H3F3B-211ENST00000591893 FAM218AQ96MZ4 157 aa12.83□□□□□ -0.36
H3F3B-211ENST00000591893 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
H3F3B-211ENST00000591893 LOC107984640A0A0U1RRK4 108 aa12.82□□□□□ -0.36
H3F3B-211ENST00000591893 INAFM2P0DMQ5 153 aa12.82□□□□□ -0.36
H3F3B-211ENST00000591893 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
H3F3B-211ENST00000591893 PSMB8P28062 276 aa12.82□□□□□ -0.36
H3F3B-211ENST00000591893 GAGE2AQ6NT46 116 aa12.82□□□□□ -0.36
H3F3B-211ENST00000591893 IGHV3OR16-12A0A075B7B8 117 aa12.81□□□□□ -0.36
H3F3B-211ENST00000591893 PRORYQ9H606 182 aa12.81□□□□□ -0.36
H3F3B-211ENST00000591893 CSDC2Q9Y534 153 aaKnown RBP12.81□□□□□ -0.36
H3F3B-211ENST00000591893 LINC00242Q5T6M2 205 aa12.81□□□□□ -0.36
H3F3B-211ENST00000591893 SETD2Q9BYW2 2564 aaPredicted RBP12.8□□□□□ -0.36
H3F3B-211ENST00000591893 NAV2Q8IVL1 2488 aa12.8□□□□□ -0.36
H3F3B-211ENST00000591893 SYNJ2BPP57105 145 aa12.8□□□□□ -0.36
H3F3B-211ENST00000591893 C10orf99Q6UWK7 81 aa12.8□□□□□ -0.36
H3F3B-211ENST00000591893 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
H3F3B-211ENST00000591893 C2orf48Q96LS8 159 aa12.8□□□□□ -0.36
H3F3B-211ENST00000591893 IGHV3-53P01767 116 aa12.79□□□□□ -0.36
H3F3B-211ENST00000591893 SONP18583 2426 aaKnown RBP12.79□□□□□ -0.36
H3F3B-211ENST00000591893 ANKRD17O75179 2603 aaKnown RBP12.79□□□□□ -0.36
H3F3B-211ENST00000591893 SMIM1B2RUZ4 78 aa12.79□□□□□ -0.36
H3F3B-211ENST00000591893 ZNF415Q09FC8 603 aa12.79□□□□□ -0.36
H3F3B-211ENST00000591893 PIK3CD-AS1Q5SR53 167 aa12.79□□□□□ -0.36
H3F3B-211ENST00000591893 J3KT08 172 aa12.78□□□□□ -0.36
H3F3B-211ENST00000591893 LRRC75A-AS1Q8N1F1 130 aa12.78□□□□□ -0.36
H3F3B-211ENST00000591893 HIST1H4AP62805 103 aaKnown RBP12.78□□□□□ -0.36
H3F3B-211ENST00000591893 Q9HAA7 133 aa12.78□□□□□ -0.36
H3F3B-211ENST00000591893 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.36
H3F3B-211ENST00000591893 A0A1B0GX51 115 aa12.77□□□□□ -0.36
H3F3B-211ENST00000591893 CRYGAP11844 174 aa12.77□□□□□ -0.36
H3F3B-211ENST00000591893 MALP21145 153 aa12.77□□□□□ -0.36
H3F3B-211ENST00000591893 ATOX1O00244 68 aa12.77□□□□□ -0.37
H3F3B-211ENST00000591893 ZNF469Q96JG9 3925 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-211ENST00000591893 HIST2H2BCQ6DN03 193 aa12.76□□□□□ -0.37
H3F3B-211ENST00000591893 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
H3F3B-211ENST00000591893 HOXD3P31249 432 aaPredicted RBP12.74□□□□□ -0.37
H3F3B-211ENST00000591893 DEFB131AP59861 70 aa12.74□□□□□ -0.37
H3F3B-211ENST00000591893 NOTCH2Q04721 2471 aa12.74□□□□□ -0.37
H3F3B-211ENST00000591893 TRAV13-1A0A0B4J241 112 aa12.74□□□□□ -0.37
H3F3B-211ENST00000591893 FAM19A3Q7Z5A8 133 aa12.74□□□□□ -0.37
H3F3B-211ENST00000591893 RBMY1BA6NDE4 496 aaKnown RBP12.73□□□□□ -0.37
H3F3B-211ENST00000591893 RBMY1EA6NEQ0 496 aaKnown RBP12.73□□□□□ -0.37
H3F3B-211ENST00000591893 RBMY1DP0C7P1 496 aaKnown RBP12.73□□□□□ -0.37
H3F3B-211ENST00000591893 RPL28P46779 137 aaKnown RBP12.73□□□□□ -0.37
H3F3B-211ENST00000591893 FAM19A5Q7Z5A7 132 aaPredicted RBP12.73□□□□□ -0.37
H3F3B-211ENST00000591893 hADV29S1A0JD25 119 aa12.73□□□□□ -0.37
H3F3B-211ENST00000591893 PIMREGQ9BSJ6 248 aa12.73□□□□□ -0.37
H3F3B-211ENST00000591893 TRAV13-2A0A0B4J235 113 aa12.72□□□□□ -0.37
H3F3B-211ENST00000591893 MXRA5Q9NR99 2828 aa12.72□□□□□ -0.37
H3F3B-211ENST00000591893 DNAL4O96015 105 aa12.72□□□□□ -0.37
H3F3B-211ENST00000591893 PF4P02776 101 aa12.72□□□□□ -0.37
H3F3B-211ENST00000591893 TEX15Q9BXT5 2789 aa12.71□□□□□ -0.37
H3F3B-211ENST00000591893 C11orf72Q8NBR9 251 aa12.71□□□□□ -0.37
H3F3B-211ENST00000591893 A8MTW9 85 aa12.71□□□□□ -0.38
H3F3B-211ENST00000591893 CRPP02741 224 aa12.71□□□□□ -0.38
H3F3B-211ENST00000591893 F5H768 121 aa12.7□□□□□ -0.38
H3F3B-211ENST00000591893 RS1O15537 224 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms