RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CRPP02741 224 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 MT-ND4LP03901 98 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 PMCHP20382 165 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 RPS10P46783 165 aaKnown RBP6.72□□□□□ -1.33
VPS4B-207ENST00000591519 AMTP48728 403 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-207ENST00000591519 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 C9orf163Q8N9P6 203 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 TMEM243Q9BU79 118 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
VPS4B-207ENST00000591519 SDHAF1A6NFY7 115 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 UBE2L6O14933 153 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 RBX1P62877 108 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 HBBP68871 147 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 IQCJQ1A5X6 159 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 FAM104BQ5XKR9 115 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 ANAPC16Q96DE5 110 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 MRAP2Q96G30 205 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 ST20Q9HBF5 79 aa6.71□□□□□ -1.34
VPS4B-207ENST00000591519 LRP1Q07954 4544 aaKnown RBP6.7□□□□□ -1.34
VPS4B-207ENST00000591519 LINC00862A6NCI5 91 aa6.7□□□□□ -1.34
VPS4B-207ENST00000591519 PRSS1P07477 247 aa6.7□□□□□ -1.34
VPS4B-207ENST00000591519 MRPL51Q4U2R6 128 aaKnown RBP6.7□□□□□ -1.34
VPS4B-207ENST00000591519 CLRN3Q8NCR9 226 aa6.7□□□□□ -1.34
VPS4B-207ENST00000591519 TMEM242Q9NWH2 141 aa6.7□□□□□ -1.34
VPS4B-207ENST00000591519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.69□□□□□ -1.34
VPS4B-207ENST00000591519 A0A1B0GUV1 79 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 A0A1B0GW15 77 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 A0A1B0GXF2 115 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 IGKV2-29A2NJV5 120 aaPredicted RBP6.69□□□□□ -1.34
VPS4B-207ENST00000591519 APCSP02743 223 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 S100A8P05109 93 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 CKS2P33552 79 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 SDIM1Q6ZPB5 146 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 LINC00269Q8N2A0 174 aa6.69□□□□□ -1.34
VPS4B-207ENST00000591519 IGLV4-60A0A075B6I1 120 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 IGKV3OR2-268A0A0C4DH90 116 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 TRBV6-5A0A0K0K1A5 114 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 D6R8Y8 96 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 I3L3M4 83 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 HLA-DQA1P01909 254 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 RNASEKQ6P5S7 137 aaKnown RBP6.68□□□□□ -1.34
VPS4B-207ENST00000591519 NRACQ8N912 160 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 SEC11CQ9BY50 192 aa6.68□□□□□ -1.34
VPS4B-207ENST00000591519 IGLV10-54A0A075B6I4 117 aa6.67□□□□□ -1.34
VPS4B-207ENST00000591519 TRAV8-4A0A0B4J246 113 aa6.67□□□□□ -1.34
VPS4B-207ENST00000591519 TSHBP01222 138 aa6.67□□□□□ -1.34
VPS4B-207ENST00000591519 RPL37AP61513 92 aaKnown RBP6.67□□□□□ -1.34
VPS4B-207ENST00000591519 CNBPP62633 177 aaKnown RBP6.67□□□□□ -1.34
VPS4B-207ENST00000591519 CIRBPQ14011 172 aaKnown RBP6.67□□□□□ -1.34
VPS4B-207ENST00000591519 ANKRD39Q53RE8 183 aa6.67□□□□□ -1.34
VPS4B-207ENST00000591519 AMMECR1LQ6DCA0 310 aa6.67□□□□□ -1.34
VPS4B-207ENST00000591519 C20orf203Q8NBC4 194 aa6.67□□□□□ -1.34
VPS4B-207ENST00000591519 FCER1GP30273 86 aa6.66□□□□□ -1.34
VPS4B-207ENST00000591519 POLR2KP53803 58 aaKnown RBP6.66□□□□□ -1.34
VPS4B-207ENST00000591519 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
VPS4B-207ENST00000591519 REG3AQ06141 175 aa6.66□□□□□ -1.34
VPS4B-207ENST00000591519 ATP5L2Q7Z4Y8 100 aa6.66□□□□□ -1.34
VPS4B-207ENST00000591519 BTF3L4Q96K17 158 aa6.66□□□□□ -1.34
VPS4B-207ENST00000591519 PANO1I0J062 215 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 VCYO14598 125 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 TNFRSF6BO95407 300 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 PPP1R17O96001 155 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 NPYP01303 97 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 FGF6P10767 208 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 CTDSP1Q9GZU7 261 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 RPS10P5Q9NQ39 176 aa6.65□□□□□ -1.34
VPS4B-207ENST00000591519 FAT3Q8TDW7 4589 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 TRBV27A0A0K0K1C4 114 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 LOC389332A0A1B0GUA5 103 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 C7orf77A4D0Y5 90 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 APOC3P02656 99 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 SLPIP03973 132 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 HNRNPA3P51991 378 aaKnown RBP6.64□□□□□ -1.35
VPS4B-207ENST00000591519 TMEM136Q6ZRR5 245 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 PRELID3AQ96N28 172 aa6.64□□□□□ -1.35
VPS4B-207ENST00000591519 TCAPO15273 167 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 S100PP25815 95 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 C10orf91Q5T1B1 145 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 ORMDL3Q8N138 153 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 KIR2DL4Q99706 377 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 SMIM2Q9BVW6 85 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
VPS4B-207ENST00000591519 CARHSP1Q9Y2V2 147 aaKnown RBP6.63□□□□□ -1.35
VPS4B-207ENST00000591519 IGHV3-64A0A075B6Q5 118 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 PPBPP02775 128 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 ESDP10768 282 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 KIAA1644Q3SXP7 199 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 RNASE13Q5GAN3 156 aaKnown RBP6.62□□□□□ -1.35
VPS4B-207ENST00000591519 Q6ZRU5 148 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 OR5A1Q8NGJ0 315 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 TMEM101Q96IK0 257 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 IMMP2LQ96T52 175 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 C20orf78Q9BR46 151 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 HMCN2Q8NDA2 5059 aa6.62□□□□□ -1.35
VPS4B-207ENST00000591519 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
VPS4B-207ENST00000591519 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.61□□□□□ -1.35
VPS4B-207ENST00000591519 H7C423 109 aa6.61□□□□□ -1.35
VPS4B-207ENST00000591519 RHEBQ15382 184 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms