RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 TRAV8-3A0A0A6YYJ7 113 aa12.31□□□□□ -0.44
CROCCP3-205ENST00000591316 G0S2P27469 103 aa12.31□□□□□ -0.44
CROCCP3-205ENST00000591316 Q0VG73 95 aa12.31□□□□□ -0.44
CROCCP3-205ENST00000591316 ZNF664Q8N3J9 261 aa12.31□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BKO60814 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BJP06899 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BOP23527 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BBP33778 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BDP58876 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BCP62807 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST2H2BEQ16778 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BHQ93079 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BNQ99877 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 HIST1H2BMQ99879 126 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 TIMM21Q9BVV7 248 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 SPANXA1Q9NS26 97 aa12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 CSDC2Q9Y534 153 aaKnown RBP12.3□□□□□ -0.44
CROCCP3-205ENST00000591316 DNAH2Q9P225 4427 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 IGLV10-54A0A075B6I4 117 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 IGKV2D-24A0A075B6R9 120 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 Q6ZUT4 128 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 NFE4Q86UQ8 179 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 TOMM6Q96B49 74 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 PRR34Q9NV39 138 aa12.29□□□□□ -0.44
CROCCP3-205ENST00000591316 C1orf196B1AJZ1 125 aa12.28□□□□□ -0.44
CROCCP3-205ENST00000591316 CHCHD1Q96BP2 118 aaKnown RBP12.28□□□□□ -0.44
CROCCP3-205ENST00000591316 SCGB3A1Q96QR1 104 aa12.28□□□□□ -0.44
CROCCP3-205ENST00000591316 PYGO1Q9Y3Y4 419 aa12.27□□□□□ -0.44
CROCCP3-205ENST00000591316 RTL8CO15255 209 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 PSCAO43653 123 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 HSBP1O75506 76 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 SERF1AO75920 110 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 MIAQ16674 131 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 FAM104AQ969W3 186 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 IGIPA6NJ69 53 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 NUPR1O60356 82 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 FAM19A2Q8N3H0 131 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 C1orf43Q9BWL3 253 aa12.26□□□□□ -0.45
CROCCP3-205ENST00000591316 IGLV4-3A0A075B6K6 122 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 A0A096LNJ9 63 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 TRAV13-1A0A0B4J241 112 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 HBDP02042 147 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 ZC2HC1BQ5TFG8 222 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 Q6ZRN7 208 aaPredicted RBP12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 RMI2Q96E14 147 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 TM2D2Q9BX73 214 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 DNAH10Q8IVF4 4471 aa12.25□□□□□ -0.45
CROCCP3-205ENST00000591316 MRPS36P82909 103 aaKnown RBP12.24□□□□□ -0.45
CROCCP3-205ENST00000591316 ERASQ7Z444 233 aa12.24□□□□□ -0.45
CROCCP3-205ENST00000591316 TMEM141Q96I45 108 aa12.24□□□□□ -0.45
CROCCP3-205ENST00000591316 LINC00959A0A1B0GUT2 108 aa12.23□□□□□ -0.45
CROCCP3-205ENST00000591316 LINC00310P59036 64 aa12.23□□□□□ -0.45
CROCCP3-205ENST00000591316 Q6ZN92 141 aa12.23□□□□□ -0.45
CROCCP3-205ENST00000591316 VCX2Q9H322 139 aa12.23□□□□□ -0.45
CROCCP3-205ENST00000591316 TRAV8-4A0A0B4J246 113 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 NDUFA6P56556 154 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 SS18Q15532 418 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 TEX43Q6ZNM6 134 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 COX11Q9Y6N1 276 aa12.22□□□□□ -0.45
CROCCP3-205ENST00000591316 XCL1P47992 114 aa12.21□□□□□ -0.46
CROCCP3-205ENST00000591316 TNP2Q05952 138 aa12.21□□□□□ -0.46
CROCCP3-205ENST00000591316 MAPKAPK5-AS1Q8N8E1 139 aa12.21□□□□□ -0.46
CROCCP3-205ENST00000591316 CHCHD10Q8WYQ3 142 aaPredicted RBP12.21□□□□□ -0.46
CROCCP3-205ENST00000591316 PRSS29PA6NIE9 313 aa12.2□□□□□ -0.46
CROCCP3-205ENST00000591316 IFITM10A6NMD0 228 aa12.2□□□□□ -0.46
CROCCP3-205ENST00000591316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.2□□□□□ -0.46
CROCCP3-205ENST00000591316 CCL25O15444 150 aa12.2□□□□□ -0.46
CROCCP3-205ENST00000591316 GAGE12HA6NDE8 117 aa12.19□□□□□ -0.46
CROCCP3-205ENST00000591316 PDZD11Q5EBL8 140 aa12.19□□□□□ -0.46
CROCCP3-205ENST00000591316 BAALCQ8WXS3 180 aa12.19□□□□□ -0.46
CROCCP3-205ENST00000591316 LECT2O14960 151 aa12.18□□□□□ -0.46
CROCCP3-205ENST00000591316 PAPPA-AS1Q5QFB9 102 aa12.18□□□□□ -0.46
CROCCP3-205ENST00000591316 AMELXQ99217 191 aa12.18□□□□□ -0.46
CROCCP3-205ENST00000591316 C2orf88Q9BSF0 95 aa12.18□□□□□ -0.46
CROCCP3-205ENST00000591316 NPSP0C0P6 89 aa12.18□□□□□ -0.46
CROCCP3-205ENST00000591316 KRTAP26-1Q6PEX3 210 aa12.18□□□□□ -0.46
CROCCP3-205ENST00000591316 FABP4P15090 132 aa12.17□□□□□ -0.46
CROCCP3-205ENST00000591316 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
CROCCP3-205ENST00000591316 LINC00173Q6ZV60 143 aa12.17□□□□□ -0.46
CROCCP3-205ENST00000591316 DNAH17Q9UFH2 4485 aa12.17□□□□□ -0.46
CROCCP3-205ENST00000591316 FRAS1Q86XX4 4008 aa12.16□□□□□ -0.46
CROCCP3-205ENST00000591316 ATP5LO75964 103 aa12.16□□□□□ -0.46
CROCCP3-205ENST00000591316 LEPROTL1O95214 131 aa12.15□□□□□ -0.46
CROCCP3-205ENST00000591316 PRSS1P07477 247 aa12.14□□□□□ -0.47
CROCCP3-205ENST00000591316 UBE2D1P51668 147 aa12.14□□□□□ -0.47
CROCCP3-205ENST00000591316 PMVKQ15126 192 aa12.14□□□□□ -0.47
CROCCP3-205ENST00000591316 CST9LQ9H4G1 147 aa12.14□□□□□ -0.47
CROCCP3-205ENST00000591316 A0A087WTM6 91 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 FOXI1Q12951 378 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 WFDC2Q14508 124 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 CD164L2Q6UWJ8 174 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 IFI27L1Q96BM0 104 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 COX6A2Q02221 97 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 COA6Q5JTJ3 125 aaKnown RBP12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 LINC00242Q5T6M2 205 aa12.13□□□□□ -0.47
CROCCP3-205ENST00000591316 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms