RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 NUPR1O60356 82 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 MGPP08493 103 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 OR5AL1P0C617 328 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 TLX1NBP0CAT3 122 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 NTF3P20783 257 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 MALP21145 153 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 C10orf25Q5T742 122 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 OR2D3Q8NGH3 330 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 SCGB1C1Q8TD33 95 aa3.57□□□□□ -1.84
DNMT1-222ENST00000590619 MRPL35Q9NZE8 188 aaKnown RBP3.57□□□□□ -1.84
DNMT1-222ENST00000590619 G3V3Q6 166 aa3.56□□□□□ -1.84
DNMT1-222ENST00000590619 RPL28P46779 137 aaKnown RBP3.56□□□□□ -1.84
DNMT1-222ENST00000590619 LRRC37A5PQ49AS3 106 aa3.56□□□□□ -1.84
DNMT1-222ENST00000590619 FAM229BQ4G0N7 80 aa3.56□□□□□ -1.84
DNMT1-222ENST00000590619 RAB24Q969Q5 203 aa3.56□□□□□ -1.84
DNMT1-222ENST00000590619 SEC22CQ9BRL7 303 aa3.56□□□□□ -1.84
DNMT1-222ENST00000590619 CDC42SE2Q9NRR3 84 aa3.56□□□□□ -1.84
DNMT1-222ENST00000590619 IGLV8-61A0A075B6I0 122 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 IGKV2D-26A0A0A0MRZ7 120 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 A0A1W2PRE2 83 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 SMLR1H3BR10 107 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 PEX7O00628 323 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 COX7A2LO14548 114 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 CXCL1P09341 107 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 CDC34P49427 236 aaPredicted RBP3.55□□□□□ -1.84
DNMT1-222ENST00000590619 TMEM241Q24JQ0 296 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
DNMT1-222ENST00000590619 UNQ6190/PRO20217Q6UXQ8 127 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 C5orf38Q86SI9 138 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 AP1S3Q96PC3 154 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 SMDT1Q9H4I9 107 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 TMEM167BQ9NRX6 74 aa3.55□□□□□ -1.84
DNMT1-222ENST00000590619 BCE1O60756 84 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 LTAP01374 205 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 GIPP09681 153 aaPredicted RBP3.54□□□□□ -1.84
DNMT1-222ENST00000590619 ZNF25P17030 456 aaPredicted RBP3.54□□□□□ -1.84
DNMT1-222ENST00000590619 IFITM2Q01629 132 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 SPAG11BQ08648 103 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 PCOTHQ58A44 107 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 SPAG11AQ6PDA7 123 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 HIST1H2BAQ96A08 127 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 TMEM101Q96IK0 257 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 BTF3L4Q96K17 158 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 SMIM3Q9BZL3 60 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 C6orf48Q9UBA6 75 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 C22orf24Q9Y442 160 aa3.54□□□□□ -1.84
DNMT1-222ENST00000590619 C1orf196B1AJZ1 125 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 ATP6V1G1O75348 118 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 TNFRSF6BO95407 300 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 NCR2O95944 276 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 CXorf1O96002 111 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 C9orf62Q8N4C0 152 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 C3orf22Q8N5N4 141 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 FMC1Q96HJ9 113 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 KRTAP9-8Q9BYQ0 159 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 HSPB11Q9Y547 144 aa3.53□□□□□ -1.84
DNMT1-222ENST00000590619 F8WDY8 70 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 NDUFA1O15239 70 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 SIX6O95475 246 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 APCSP02743 223 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 H2BFSP57053 126 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 UBE2G2P60604 165 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 NDUFA5Q16718 116 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 Q5BKY6 102 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 DAND5Q8N907 189 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 GATD1Q8NB37 220 aa3.52□□□□□ -1.85
DNMT1-222ENST00000590619 FAM74A7A6NL05 159 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 CFC1P0CG37 223 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 ATP6V0CP27449 155 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 CTRLP40313 264 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 UBE2G1P62253 170 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 LBHQ53QV2 105 aaPredicted RBP3.51□□□□□ -1.85
DNMT1-222ENST00000590619 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 KIR2DL4Q99706 377 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 CYTL1Q9NRR1 136 aa3.51□□□□□ -1.85
DNMT1-222ENST00000590619 FXYD6-FXYD2A0A087WZ82 144 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 HMSDA8MTL9 139 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 ARPC5O15511 151 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 MRPL52Q86TS9 123 aaKnown RBP3.5□□□□□ -1.85
DNMT1-222ENST00000590619 OR10D4PQ8NGN7 298 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 ORAOV1Q8WV07 137 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 RPL39LQ96EH5 51 aaKnown RBP3.5□□□□□ -1.85
DNMT1-222ENST00000590619 TPPP3Q9BW30 176 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 UBE2D4Q9Y2X8 147 aa3.5□□□□□ -1.85
DNMT1-222ENST00000590619 TRAV13-1A0A0B4J241 112 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 NDUFC2-KCTD14E9PQ53 114 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 IGLC6P0CF74 106 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 PMCHP20382 165 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 TEX261Q6UWH6 196 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 SLC7A5P1Q8MH63 180 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 PPP1R1CQ8WVI7 109 aa3.49□□□□□ -1.85
DNMT1-222ENST00000590619 NKX6-2Q9C056 277 aaPredicted RBP3.49□□□□□ -1.85
DNMT1-222ENST00000590619 ACTR3CQ9C0K3 210 aaPredicted RBP3.49□□□□□ -1.85
DNMT1-222ENST00000590619 SDHAF1A6NFY7 115 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 I3L3M4 83 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 MPC2O95563 127 aa3.48□□□□□ -1.85
DNMT1-222ENST00000590619 PET100P0DJ07 73 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms