RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 CITED2Q99967 270 aaPredicted RBP8.89□□□□□ -0.99
PDE4A-207ENST00000590407 ANAPC13Q9BS18 74 aa8.89□□□□□ -0.99
PDE4A-207ENST00000590407 IGHV3-38A0A0C4DH36 116 aa8.88□□□□□ -0.99
PDE4A-207ENST00000590407 HERV-K104P63124 156 aa8.88□□□□□ -0.99
PDE4A-207ENST00000590407 RPL36AP83881 106 aaKnown RBP8.88□□□□□ -0.99
PDE4A-207ENST00000590407 LRRC75A-AS1Q8N1F1 130 aa8.88□□□□□ -0.99
PDE4A-207ENST00000590407 RPL36ALQ969Q0 106 aaKnown RBP8.88□□□□□ -0.99
PDE4A-207ENST00000590407 SMIM1B2RUZ4 78 aa8.87□□□□□ -0.99
PDE4A-207ENST00000590407 K7EQD1 137 aa8.87□□□□□ -0.99
PDE4A-207ENST00000590407 COX6A2Q02221 97 aa8.87□□□□□ -0.99
PDE4A-207ENST00000590407 ODF3L2Q3SX64 289 aa8.87□□□□□ -0.99
PDE4A-207ENST00000590407 C1orf158Q8N1D5 194 aa8.87□□□□□ -0.99
PDE4A-207ENST00000590407 ZNF625Q96I27 306 aaPredicted RBP8.87□□□□□ -0.99
PDE4A-207ENST00000590407 Q9H8V8 135 aa8.87□□□□□ -0.99
PDE4A-207ENST00000590407 TRAV4A0A0B4J268 109 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 COX7A2LO14548 114 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 SHISA2Q6UWI4 295 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 CLEC2BQ92478 149 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 CREBBPQ92793 2442 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 MAPK1IP1LQ8NDC0 245 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 CR1P17927 2039 aa8.86□□□□□ -0.99
PDE4A-207ENST00000590407 PKD1L2Q7Z442 2459 aa8.85□□□□□ -0.99
PDE4A-207ENST00000590407 F5H768 121 aa8.85□□□□□ -0.99
PDE4A-207ENST00000590407 NHLRC4P0CG21 123 aaPredicted RBP8.85□□□□□ -0.99
PDE4A-207ENST00000590407 NDUFV3P56181 108 aaKnown RBP8.85□□□□□ -0.99
PDE4A-207ENST00000590407 Q6ZSV7 163 aa8.85□□□□□ -0.99
PDE4A-207ENST00000590407 STHQ8IWL8 128 aa8.85□□□□□ -0.99
PDE4A-207ENST00000590407 CDC42SE2Q9NRR3 84 aa8.85□□□□□ -0.99
PDE4A-207ENST00000590407 CRLF1O75462 422 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 ACYP1P07311 99 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 NPC2P61916 151 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 NTM-AS1Q6ZSK4 140 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 C15orf53Q8NAA6 179 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 XCL2Q9UBD3 114 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 VPS13CQ709C8 3753 aa8.84□□□□□ -0.99
PDE4A-207ENST00000590407 TRGV1A0A0A0MS02 117 aa8.84□□□□□ -1
PDE4A-207ENST00000590407 TRACP01848 142 aa8.84□□□□□ -1
PDE4A-207ENST00000590407 LINC00694P0DN24 101 aa8.84□□□□□ -1
PDE4A-207ENST00000590407 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -1
PDE4A-207ENST00000590407 GAGE5Q13069 117 aa8.84□□□□□ -1
PDE4A-207ENST00000590407 GAGE6Q13070 117 aa8.84□□□□□ -1
PDE4A-207ENST00000590407 CACNA1AO00555 2505 aa8.83□□□□□ -1
PDE4A-207ENST00000590407 PF4P02776 101 aa8.83□□□□□ -1
PDE4A-207ENST00000590407 SOSTDC1Q6X4U4 206 aa8.83□□□□□ -1
PDE4A-207ENST00000590407 DAND5Q8N907 189 aa8.83□□□□□ -1
PDE4A-207ENST00000590407 DEFB113Q30KQ7 82 aa8.82□□□□□ -1
PDE4A-207ENST00000590407 KHDC1LQ5JSQ8 128 aa8.82□□□□□ -1
PDE4A-207ENST00000590407 FAM222AQ5U5X8 452 aa8.82□□□□□ -1
PDE4A-207ENST00000590407 USP9XQ93008 2570 aaPredicted RBP8.82□□□□□ -1
PDE4A-207ENST00000590407 TRBV7-7A0A0K0K1E9 115 aa8.81□□□□□ -1
PDE4A-207ENST00000590407 TTC32Q5I0X7 151 aa8.81□□□□□ -1
PDE4A-207ENST00000590407 PRIMA1Q86XR5 153 aa8.81□□□□□ -1
PDE4A-207ENST00000590407 FAM110AQ9BQ89 295 aa8.81□□□□□ -1
PDE4A-207ENST00000590407 TMEM243Q9BU79 118 aa8.81□□□□□ -1
PDE4A-207ENST00000590407 Q6ZTI0 123 aa8.8□□□□□ -1
PDE4A-207ENST00000590407 IMUPQ9GZP8 106 aa8.8□□□□□ -1
PDE4A-207ENST00000590407 COL12A1Q99715 3063 aa8.8□□□□□ -1
PDE4A-207ENST00000590407 TRAV13-1A0A0B4J241 112 aa8.79□□□□□ -1
PDE4A-207ENST00000590407 USP9YO00507 2555 aaPredicted RBP8.79□□□□□ -1
PDE4A-207ENST00000590407 MEIG1Q5JSS6 88 aa8.79□□□□□ -1
PDE4A-207ENST00000590407 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
PDE4A-207ENST00000590407 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 TRBV6-4A0A1B0GX49 114 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 C16orf74Q96GX8 76 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 GAGE12JA6NER3 117 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 CCL24O00175 119 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 GAGE7O76087 117 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 GAGE12FP0CL80 117 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 GAGE12GP0CL81 117 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 GAGE12IP0CL82 117 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 GAGE4Q13068 117 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 SDIM1Q6ZPB5 146 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 OVOL2Q9BRP0 275 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 CELSR2Q9HCU4 2923 aa8.78□□□□□ -1
PDE4A-207ENST00000590407 ANKRD17O75179 2603 aaKnown RBP8.77□□□□□ -1
PDE4A-207ENST00000590407 PLAC8L1A1L4L8 177 aa8.77□□□□□ -1.01
PDE4A-207ENST00000590407 NDUFA7O95182 113 aa8.77□□□□□ -1.01
PDE4A-207ENST00000590407 RPL28P46779 137 aaKnown RBP8.77□□□□□ -1.01
PDE4A-207ENST00000590407 HIST2H2BCQ6DN03 193 aa8.77□□□□□ -1.01
PDE4A-207ENST00000590407 HIST2H2BDQ6DRA6 164 aa8.77□□□□□ -1.01
PDE4A-207ENST00000590407 Q96MF0 132 aa8.77□□□□□ -1.01
PDE4A-207ENST00000590407 UBE2L6O14933 153 aa8.76□□□□□ -1.01
PDE4A-207ENST00000590407 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
PDE4A-207ENST00000590407 KRTAP1-3Q8IUG1 177 aa8.76□□□□□ -1.01
PDE4A-207ENST00000590407 NOP10Q9NPE3 64 aaKnown RBP8.76□□□□□ -1.01
PDE4A-207ENST00000590407 KRTAP10-9P60411 292 aa8.75□□□□□ -1.01
PDE4A-207ENST00000590407 COX7B2Q8TF08 81 aa8.75□□□□□ -1.01
PDE4A-207ENST00000590407 DNAJC9-AS1A6NH13 148 aa8.74□□□□□ -1.01
PDE4A-207ENST00000590407 FLNCQ14315 2725 aa8.74□□□□□ -1.01
PDE4A-207ENST00000590407 CRPP02741 224 aa8.73□□□□□ -1.01
PDE4A-207ENST00000590407 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
PDE4A-207ENST00000590407 INAFM2P0DMQ5 153 aa8.73□□□□□ -1.01
PDE4A-207ENST00000590407 LINC00643Q86TS7 51 aa8.73□□□□□ -1.01
PDE4A-207ENST00000590407 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
PDE4A-207ENST00000590407 A0A0U1RRA0 63 aa8.73□□□□□ -1.01
PDE4A-207ENST00000590407 CRYBG3Q68DQ2 2970 aa8.72□□□□□ -1.01
PDE4A-207ENST00000590407 ACACBO00763 2458 aa8.72□□□□□ -1.01
PDE4A-207ENST00000590407 IGHV3OR16-9A0A0B4J2B5 98 aa8.72□□□□□ -1.01
PDE4A-207ENST00000590407 IBA57-AS1B1ANH7 110 aa8.72□□□□□ -1.01
PDE4A-207ENST00000590407 CSNK1G2-AS1Q8NCQ2 148 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms