RNA–Protein interactions for RNA: ENST00000589333.2

UCA1-202, Transcript of urothelial cancer associated 1, humanhuman

TSL 3

Gene UCA1, Length 433 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-202ENST00000589333 LINC00476Q8WZB0 136 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 C2orf88Q9BSF0 95 aa4.28□□□□□ -1.72
UCA1-202ENST00000589333 TRBV25-1A0A075B6N4 114 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 IGHV1-24A0A0C4DH33 117 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 BTF3P20290 206 aaKnown RBP4.27□□□□□ -1.73
UCA1-202ENST00000589333 DDTP30046 118 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
UCA1-202ENST00000589333 MRPL52Q86TS9 123 aaKnown RBP4.27□□□□□ -1.73
UCA1-202ENST00000589333 NIT1Q86X76 327 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 C20orf203Q8NBC4 194 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 FAM104AQ969W3 186 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 C14orf144Q96I85 54 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 KIR2DL4Q99706 377 aa4.27□□□□□ -1.73
UCA1-202ENST00000589333 DNAH6Q9C0G6 4158 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.26□□□□□ -1.73
UCA1-202ENST00000589333 IGKV2-29A2NJV5 120 aaPredicted RBP4.26□□□□□ -1.73
UCA1-202ENST00000589333 IFITM10A6NMD0 228 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 NUPR1O60356 82 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 SERF1AO75920 110 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 DNAH10OSP0CZ25 163 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 FCER1GP30273 86 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 CCL18P55774 89 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
UCA1-202ENST00000589333 MPV17L2Q567V2 206 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 LINC01556Q5JQF7 62 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 LGALS9CQ6DKI2 356 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 CHCHD1Q96BP2 118 aaKnown RBP4.26□□□□□ -1.73
UCA1-202ENST00000589333 TMEM243Q9BU79 118 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 KRTAP1-5Q9BYS1 174 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 UBE2D4Q9Y2X8 147 aa4.26□□□□□ -1.73
UCA1-202ENST00000589333 H7C423 109 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 LINC00614P0C842 121 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 NDUFA6P56556 154 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 LAGE3Q14657 143 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 ORMDL2Q53FV1 153 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 RNASEKQ6P5S7 137 aaKnown RBP4.25□□□□□ -1.73
UCA1-202ENST00000589333 C2orf66Q6UXQ4 117 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 FA2HQ7L5A8 372 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 Q8N976 141 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 OR10D4PQ8NGN7 298 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 PRSS3P2Q8NHM4 247 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 TIMM21Q9BVV7 248 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
UCA1-202ENST00000589333 IGLV4-60A0A075B6I1 120 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 TRAV8-6A0A0B4J262 113 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 LCE6AA0A183 80 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 A0A1B0GUV1 79 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 A0A1B0GV90 55 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 IGIPA6NJ69 53 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 SIVA1O15304 175 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 HBDP02042 147 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 FGF6P10767 208 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 ZNF25P17030 456 aaPredicted RBP4.24□□□□□ -1.73
UCA1-202ENST00000589333 RBX1P62877 108 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 GAGE6Q13070 117 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 JOSD1Q15040 202 aaPredicted RBP4.24□□□□□ -1.73
UCA1-202ENST00000589333 PMCHL1Q16048 86 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 PDZD11Q5EBL8 140 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 Q6ZUT4 128 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 BAGE3Q86Y29 109 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 UBE2DNLQ8IWF7 75 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 TOMM6Q96B49 74 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 CYSLTR1Q9Y271 337 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 CSDC2Q9Y534 153 aaKnown RBP4.24□□□□□ -1.73
UCA1-202ENST00000589333 KMT2AQ03164 3969 aa4.24□□□□□ -1.73
UCA1-202ENST00000589333 EPPK1P58107 5090 aaKnown RBP4.23□□□□□ -1.73
UCA1-202ENST00000589333 IGLV4-3A0A075B6K6 122 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 HSBP1O75506 76 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 NPSP0C0P6 89 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
UCA1-202ENST00000589333 Q6ZR54 194 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 LINC00173Q6ZV60 143 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 PACRGQ96M98 296 aaPredicted RBP4.23□□□□□ -1.73
UCA1-202ENST00000589333 TIMM17AQ99595 171 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 Q9H8V8 135 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 PRR34Q9NV39 138 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 PYGO1Q9Y3Y4 419 aa4.23□□□□□ -1.73
UCA1-202ENST00000589333 RYR2Q92736 4967 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 NBDYA0A0U1RRE5 68 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 UBE2L6O14933 153 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 LY6G6CO95867 125 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 IGHV3-33P01772 117 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 IGHV3-30-3P0DP02 117 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 FAM19A2Q8N3H0 131 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 TMEM18Q96B42 140 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 HIST1H2BLQ99880 126 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 CDC42SE2Q9NRR3 84 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 HYDINQ4G0P3 5121 aa4.22□□□□□ -1.73
UCA1-202ENST00000589333 A0A087WX48 190 aa4.21□□□□□ -1.74
UCA1-202ENST00000589333 LINC01549A6NIU2 74 aa4.21□□□□□ -1.74
UCA1-202ENST00000589333 IBA57-AS1B1ANH7 110 aa4.21□□□□□ -1.74
UCA1-202ENST00000589333 K7EP13 123 aa4.21□□□□□ -1.74
UCA1-202ENST00000589333 FABP4P15090 132 aa4.21□□□□□ -1.74
UCA1-202ENST00000589333 ANKRD39Q53RE8 183 aa4.21□□□□□ -1.74
UCA1-202ENST00000589333 RNASE13Q5GAN3 156 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms