RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 HIST1H2BMQ99879 126 aa8.21□□□□□ -1.1
DNMT1-218ENST00000589294 KRTAP1-5Q9BYS1 174 aa8.21□□□□□ -1.1
DNMT1-218ENST00000589294 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
DNMT1-218ENST00000589294 PRR34Q9NV39 138 aa8.21□□□□□ -1.1
DNMT1-218ENST00000589294 NFE4Q86UQ8 179 aa8.2□□□□□ -1.1
DNMT1-218ENST00000589294 LINC00269Q8N2A0 174 aa8.2□□□□□ -1.1
DNMT1-218ENST00000589294 ZNF664Q8N3J9 261 aa8.2□□□□□ -1.1
DNMT1-218ENST00000589294 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
DNMT1-218ENST00000589294 IGIPA6NJ69 53 aa8.19□□□□□ -1.1
DNMT1-218ENST00000589294 MRPS36P82909 103 aaKnown RBP8.19□□□□□ -1.1
DNMT1-218ENST00000589294 HYDINQ4G0P3 5121 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 REG3AQ06141 175 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 MIAQ16674 131 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 C1orf134Q5TEV5 83 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 ENHOQ6UWT2 76 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 ERASQ7Z444 233 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 C6orf223Q8N319 242 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 TMEM141Q96I45 108 aa8.18□□□□□ -1.1
DNMT1-218ENST00000589294 TRAV8-4A0A0B4J246 113 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 CCL25O15444 150 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 HSBP1O75506 76 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 HBDP02042 147 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 CRPP02741 224 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 PAPPA-AS1Q5QFB9 102 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 RMI2Q96E14 147 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 SCGB3A1Q96QR1 104 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 TIMM17AQ99595 171 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 TM2D2Q9BX73 214 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 COX11Q9Y6N1 276 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 RYR2Q92736 4967 aa8.17□□□□□ -1.1
DNMT1-218ENST00000589294 A0A096LNJ9 63 aa8.16□□□□□ -1.1
DNMT1-218ENST00000589294 SERF1AO75920 110 aa8.16□□□□□ -1.1
DNMT1-218ENST00000589294 COA6Q5JTJ3 125 aaKnown RBP8.16□□□□□ -1.1
DNMT1-218ENST00000589294 FAM104AQ969W3 186 aa8.16□□□□□ -1.1
DNMT1-218ENST00000589294 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
DNMT1-218ENST00000589294 LINC00310P59036 64 aa8.15□□□□□ -1.1
DNMT1-218ENST00000589294 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.1
DNMT1-218ENST00000589294 Q6ZN92 141 aa8.15□□□□□ -1.1
DNMT1-218ENST00000589294 VCX2Q9H322 139 aa8.15□□□□□ -1.1
DNMT1-218ENST00000589294 Q9HAA7 133 aa8.15□□□□□ -1.1
DNMT1-218ENST00000589294 DNAH2Q9P225 4427 aa8.15□□□□□ -1.11
DNMT1-218ENST00000589294 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-218ENST00000589294 ATP5LO75964 103 aa8.14□□□□□ -1.11
DNMT1-218ENST00000589294 PMCHL1Q16048 86 aa8.14□□□□□ -1.11
DNMT1-218ENST00000589294 Q6ZUT4 128 aa8.14□□□□□ -1.11
DNMT1-218ENST00000589294 OPRPNQ99935 248 aaPredicted RBP8.14□□□□□ -1.11
DNMT1-218ENST00000589294 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
DNMT1-218ENST00000589294 IGKV2D-24A0A075B6R9 120 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 LINC00959A0A1B0GUT2 108 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 NUPR1O60356 82 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 NDUFA6P56556 154 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 SS18Q15532 418 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 CLPSL2Q6UWE3 100 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 TEX43Q6ZNM6 134 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 Q6ZRN7 208 aaPredicted RBP8.13□□□□□ -1.11
DNMT1-218ENST00000589294 AMELXQ99217 191 aa8.13□□□□□ -1.11
DNMT1-218ENST00000589294 IGKV3OR2-268A0A0C4DH90 116 aa8.12□□□□□ -1.11
DNMT1-218ENST00000589294 FAM19A2Q8N3H0 131 aa8.12□□□□□ -1.11
DNMT1-218ENST00000589294 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
DNMT1-218ENST00000589294 RTL8CO15255 209 aa8.11□□□□□ -1.11
DNMT1-218ENST00000589294 PSCAO43653 123 aa8.11□□□□□ -1.11
DNMT1-218ENST00000589294 RNASE13Q5GAN3 156 aaKnown RBP8.11□□□□□ -1.11
DNMT1-218ENST00000589294 IGLV10-54A0A075B6I4 117 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 IFITM10A6NMD0 228 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 LEPROTL1O95214 131 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 PMVKQ15126 192 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 KRTAP26-1Q6PEX3 210 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 LINC00336Q6ZUF6 198 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 BAALCQ8WXS3 180 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
DNMT1-218ENST00000589294 IFI27L1Q96BM0 104 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 CST9LQ9H4G1 147 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 RYR3Q15413 4870 aa8.1□□□□□ -1.11
DNMT1-218ENST00000589294 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
DNMT1-218ENST00000589294 S100A6P06703 90 aa8.09□□□□□ -1.11
DNMT1-218ENST00000589294 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
DNMT1-218ENST00000589294 LINC00173Q6ZV60 143 aa8.09□□□□□ -1.11
DNMT1-218ENST00000589294 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
DNMT1-218ENST00000589294 PACRGQ96M98 296 aaPredicted RBP8.09□□□□□ -1.11
DNMT1-218ENST00000589294 DNAH17Q9UFH2 4485 aa8.09□□□□□ -1.11
DNMT1-218ENST00000589294 DNAH10Q8IVF4 4471 aa8.09□□□□□ -1.12
DNMT1-218ENST00000589294 GAGE12HA6NDE8 117 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 PRSS1P07477 247 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 XCL1P47992 114 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 UBE2D1P51668 147 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 SEC11AP67812 179 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 ZC2HC1BQ5TFG8 222 aa8.08□□□□□ -1.12
DNMT1-218ENST00000589294 FABP4P15090 132 aa8.07□□□□□ -1.12
DNMT1-218ENST00000589294 FOXI1Q12951 378 aa8.07□□□□□ -1.12
DNMT1-218ENST00000589294 LINC00242Q5T6M2 205 aa8.07□□□□□ -1.12
DNMT1-218ENST00000589294 MAPKAPK5-AS1Q8N8E1 139 aa8.07□□□□□ -1.12
DNMT1-218ENST00000589294 TRAV12-1A0A0B4J245 112 aa8.06□□□□□ -1.12
DNMT1-218ENST00000589294 LRCOL1A6NCL2 159 aa8.06□□□□□ -1.12
DNMT1-218ENST00000589294 IGHV3OR16-9A0A0B4J2B5 98 aa8.05□□□□□ -1.12
DNMT1-218ENST00000589294 TINCRA0A1B0GVN0 87 aa8.05□□□□□ -1.12
DNMT1-218ENST00000589294 HERVK_113P63121 156 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms