RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 UBE2L6O14933 153 aa13.89□□□□□ -0.19
TRIM47-204ENST00000587339 FGF6P10767 208 aa13.89□□□□□ -0.19
TRIM47-204ENST00000587339 TMEM97Q5BJF2 176 aa13.89□□□□□ -0.19
TRIM47-204ENST00000587339 Q6ZUT4 128 aa13.89□□□□□ -0.19
TRIM47-204ENST00000587339 VSIG2Q96IQ7 327 aa13.89□□□□□ -0.19
TRIM47-204ENST00000587339 C11orf68Q9H3H3 251 aaKnown RBP13.89□□□□□ -0.19
TRIM47-204ENST00000587339 IGKV2D-26A0A0A0MRZ7 120 aa13.88□□□□□ -0.19
TRIM47-204ENST00000587339 HTN3P15516 51 aa13.88□□□□□ -0.19
TRIM47-204ENST00000587339 MRPS36P82909 103 aaKnown RBP13.88□□□□□ -0.19
TRIM47-204ENST00000587339 SMAGPQ0VAQ4 97 aa13.88□□□□□ -0.19
TRIM47-204ENST00000587339 DEFB121Q5J5C9 76 aa13.88□□□□□ -0.19
TRIM47-204ENST00000587339 MRPL52Q86TS9 123 aaKnown RBP13.88□□□□□ -0.19
TRIM47-204ENST00000587339 TRAV26-1A0A087WT03 109 aa13.88□□□□□ -0.19
TRIM47-204ENST00000587339 CSDC2Q9Y534 153 aaKnown RBP13.88□□□□□ -0.19
TRIM47-204ENST00000587339 MGAM2Q2M2H8 2515 aa13.87□□□□□ -0.19
TRIM47-204ENST00000587339 C12orf74Q32Q52 190 aa13.87□□□□□ -0.19
TRIM47-204ENST00000587339 NFE4Q86UQ8 179 aa13.87□□□□□ -0.19
TRIM47-204ENST00000587339 CHAC1Q9BUX1 264 aa13.87□□□□□ -0.19
TRIM47-204ENST00000587339 H7C423 109 aa13.86□□□□□ -0.19
TRIM47-204ENST00000587339 PCP2Q8IVA1 136 aa13.86□□□□□ -0.19
TRIM47-204ENST00000587339 BOD1L2Q8IYS8 172 aa13.86□□□□□ -0.19
TRIM47-204ENST00000587339 MRPS16Q9Y3D3 137 aaKnown RBP13.86□□□□□ -0.19
TRIM47-204ENST00000587339 EREGO14944 169 aa13.86□□□□□ -0.19
TRIM47-204ENST00000587339 TMEM170BQ5T4T1 132 aa13.86□□□□□ -0.19
TRIM47-204ENST00000587339 AMMECR1LQ6DCA0 310 aa13.86□□□□□ -0.19
TRIM47-204ENST00000587339 A0A0J9YXV3 536 aa13.85□□□□□ -0.19
TRIM47-204ENST00000587339 A0A096LPF7 62 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 OR5A1Q8NGJ0 315 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 SPATA25Q9BR10 227 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 A0A0J9YWU9 116 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 MRAPQ8TCY5 172 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 TMEM101Q96IK0 257 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 CHCHD5Q9BSY4 110 aa13.84□□□□□ -0.19
TRIM47-204ENST00000587339 DLEU1O43261 78 aa13.83□□□□□ -0.2
TRIM47-204ENST00000587339 TRAV8-6A0A0B4J262 113 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 E9PLD3 99 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 HERVK_113P61574 105 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 TTTY13Q9BZ97 58 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 M0R143 59 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
TRIM47-204ENST00000587339 GAGE6Q13070 117 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 TM2D3Q9BRN9 247 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 SNHG12Q9BXW3 62 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 CDC42SE2Q9NRR3 84 aa13.82□□□□□ -0.2
TRIM47-204ENST00000587339 MRPL23Q16540 153 aaKnown RBP13.81□□□□□ -0.2
TRIM47-204ENST00000587339 ZNF22P17026 224 aaPredicted RBP13.8□□□□□ -0.2
TRIM47-204ENST00000587339 UBE2D1P51668 147 aa13.8□□□□□ -0.2
TRIM47-204ENST00000587339 Q6ZTC4 211 aa13.8□□□□□ -0.2
TRIM47-204ENST00000587339 C2orf91Q6ZV80 131 aa13.8□□□□□ -0.2
TRIM47-204ENST00000587339 TINCRA0A1B0GVN0 87 aa13.79□□□□□ -0.2
TRIM47-204ENST00000587339 ICOSQ9Y6W8 199 aa13.79□□□□□ -0.2
TRIM47-204ENST00000587339 C11orf45Q8TAV5 145 aa13.78□□□□□ -0.2
TRIM47-204ENST00000587339 SIVA1O15304 175 aa13.78□□□□□ -0.2
TRIM47-204ENST00000587339 SH2D6Q7Z4S9 175 aa13.78□□□□□ -0.2
TRIM47-204ENST00000587339 TENM3Q9P273 2699 aa13.77□□□□□ -0.2
TRIM47-204ENST00000587339 TMEM223A0PJW6 202 aa13.77□□□□□ -0.21
TRIM47-204ENST00000587339 GEMIN7Q9H840 131 aaKnown RBP13.77□□□□□ -0.21
TRIM47-204ENST00000587339 BATFQ16520 125 aa13.76□□□□□ -0.21
TRIM47-204ENST00000587339 MAPKAPK5-AS1Q8N8E1 139 aa13.76□□□□□ -0.21
TRIM47-204ENST00000587339 TRAV13-1A0A0B4J241 112 aa13.76□□□□□ -0.21
TRIM47-204ENST00000587339 IGLV4-60A0A075B6I1 120 aa13.75□□□□□ -0.21
TRIM47-204ENST00000587339 TMEM262E9PQX1 116 aa13.75□□□□□ -0.21
TRIM47-204ENST00000587339 NANOS2P60321 138 aaKnown RBP13.75□□□□□ -0.21
TRIM47-204ENST00000587339 HINT1P49773 126 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-204ENST00000587339 SEC11AP67812 179 aa13.74□□□□□ -0.21
TRIM47-204ENST00000587339 MYMXA0A1B0GTQ4 84 aa13.74□□□□□ -0.21
TRIM47-204ENST00000587339 H3BNG1 76 aa13.74□□□□□ -0.21
TRIM47-204ENST00000587339 TIRAPP58753 221 aa13.74□□□□□ -0.21
TRIM47-204ENST00000587339 MPV17L2Q567V2 206 aa13.74□□□□□ -0.21
TRIM47-204ENST00000587339 LINC00242Q5T6M2 205 aa13.73□□□□□ -0.21
TRIM47-204ENST00000587339 HERVK_113P63121 156 aa13.72□□□□□ -0.21
TRIM47-204ENST00000587339 FAM19A3Q7Z5A8 133 aa13.72□□□□□ -0.21
TRIM47-204ENST00000587339 IGHV3-64A0A075B6Q5 118 aa13.72□□□□□ -0.21
TRIM47-204ENST00000587339 A0A1B0GUV1 79 aa13.72□□□□□ -0.21
TRIM47-204ENST00000587339 ZNF815PA8K554 130 aa13.71□□□□□ -0.21
TRIM47-204ENST00000587339 J3QQQ9 107 aa13.71□□□□□ -0.21
TRIM47-204ENST00000587339 HIGD1BQ9P298 99 aa13.71□□□□□ -0.21
TRIM47-204ENST00000587339 IGLV5-45A0A087WSX0 123 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 DEFB131BA0A096LNP1 70 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 LEPROTO15243 131 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 RBX1P62877 108 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 COX6A2Q02221 97 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 CDKN2A-AS1Q9UH64 79 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 LGALS3P17931 250 aaKnown RBP13.7□□□□□ -0.22
TRIM47-204ENST00000587339 TSPEAR-AS2P59090 65 aa13.7□□□□□ -0.22
TRIM47-204ENST00000587339 H3BRM9 83 aa13.69□□□□□ -0.22
TRIM47-204ENST00000587339 LELP1Q5T871 98 aa13.69□□□□□ -0.22
TRIM47-204ENST00000587339 IGKV3OR2-268A0A0C4DH90 116 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 TRAV8-3A0A0A6YYJ7 113 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 IGHV1-58A0A0C4DH39 117 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 SPINK8P0C7L1 97 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 IGHV3-30-3P0DP02 117 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 BVES-AS1Q5T3Y7 98 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 PLEKHB2Q96CS7 222 aa13.68□□□□□ -0.22
TRIM47-204ENST00000587339 HSD52Q0P140 79 aa13.67□□□□□ -0.22
TRIM47-204ENST00000587339 LYPD5Q6UWN5 251 aa13.67□□□□□ -0.22
TRIM47-204ENST00000587339 SCGB1D4Q6XE38 83 aa13.66□□□□□ -0.22
TRIM47-204ENST00000587339 COL5A1-AS1Q5SY13 56 aa13.64□□□□□ -0.23
TRIM47-204ENST00000587339 TRAV10A0A0B4J240 114 aa13.63□□□□□ -0.23
TRIM47-204ENST00000587339 LINC00959A0A1B0GUT2 108 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms