RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PMVKQ15126 192 aa8.78□□□□□ -1
VMP1-202ENST00000585847 TMEM101Q96IK0 257 aa8.78□□□□□ -1
VMP1-202ENST00000585847 VSIG2Q96IQ7 327 aa8.78□□□□□ -1
VMP1-202ENST00000585847 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
VMP1-202ENST00000585847 HYDINQ4G0P3 5121 aa8.77□□□□□ -1.01
VMP1-202ENST00000585847 NUPR2A6NF83 97 aa8.77□□□□□ -1.01
VMP1-202ENST00000585847 F8VRH5 84 aa8.77□□□□□ -1.01
VMP1-202ENST00000585847 SEC11AP67812 179 aa8.77□□□□□ -1.01
VMP1-202ENST00000585847 DGAT2L7PQ6IED9 249 aa8.77□□□□□ -1.01
VMP1-202ENST00000585847 UBE2D4Q9Y2X8 147 aa8.77□□□□□ -1.01
VMP1-202ENST00000585847 DPM2O94777 84 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 ODF1Q14990 250 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 AMMECR1LQ6DCA0 310 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 Q8N976 141 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 OR5A1Q8NGJ0 315 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 BAALCQ8WXS3 180 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 VAMP8Q9BV40 100 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 VCX2Q9H322 139 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 APLNQ9ULZ1 77 aa8.76□□□□□ -1.01
VMP1-202ENST00000585847 TRAV9-2A0A087WT02 112 aa8.75□□□□□ -1.01
VMP1-202ENST00000585847 A0A1B0GUV1 79 aa8.75□□□□□ -1.01
VMP1-202ENST00000585847 CCL25O15444 150 aa8.75□□□□□ -1.01
VMP1-202ENST00000585847 FGF6P10767 208 aa8.75□□□□□ -1.01
VMP1-202ENST00000585847 LELP1Q5T871 98 aa8.75□□□□□ -1.01
VMP1-202ENST00000585847 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 IGLV4-3A0A075B6K6 122 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 IGHV3-38A0A0C4DH36 116 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 IGLL5B9A064 214 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 TSTD3H0UI37 97 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 TCTAP57738 103 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 RPL39P62891 51 aaKnown RBP8.74□□□□□ -1.01
VMP1-202ENST00000585847 LINC00173Q6ZV60 143 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 AMELXQ99217 191 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 Q9UF83 564 aa8.74□□□□□ -1.01
VMP1-202ENST00000585847 CHTOPQ9Y3Y2 248 aaKnown RBP8.74□□□□□ -1.01
VMP1-202ENST00000585847 TRAV8-6A0A0B4J262 113 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 A0A0J9YY99 117 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 LOC100131303A0A0U1RQF7 123 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 PRSS29PA6NIE9 313 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 IGKCP01834 107 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 CHCHD5Q9BSY4 110 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 CST9LQ9H4G1 147 aa8.73□□□□□ -1.01
VMP1-202ENST00000585847 KLK5Q9Y337 293 aaPredicted RBP8.73□□□□□ -1.01
VMP1-202ENST00000585847 VPS13DQ5THJ4 4388 aa8.72□□□□□ -1.01
VMP1-202ENST00000585847 A0A096LPF7 62 aa8.72□□□□□ -1.01
VMP1-202ENST00000585847 NFE4Q86UQ8 179 aa8.72□□□□□ -1.01
VMP1-202ENST00000585847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
VMP1-202ENST00000585847 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
VMP1-202ENST00000585847 H0Y8G0 127 aa8.71□□□□□ -1.02
VMP1-202ENST00000585847 HERVK_113P61574 105 aa8.71□□□□□ -1.02
VMP1-202ENST00000585847 FAM19A3Q7Z5A8 133 aa8.71□□□□□ -1.02
VMP1-202ENST00000585847 ZNF664Q8N3J9 261 aa8.71□□□□□ -1.02
VMP1-202ENST00000585847 MRPL35Q9NZE8 188 aaKnown RBP8.71□□□□□ -1.02
VMP1-202ENST00000585847 IGLC3P0DOY3 106 aa8.7□□□□□ -1.02
VMP1-202ENST00000585847 CDC42SE2Q9NRR3 84 aa8.7□□□□□ -1.02
VMP1-202ENST00000585847 DNAH6Q9C0G6 4158 aa8.69□□□□□ -1.02
VMP1-202ENST00000585847 TINCRA0A1B0GVN0 87 aa8.69□□□□□ -1.02
VMP1-202ENST00000585847 K7EP13 123 aa8.69□□□□□ -1.02
VMP1-202ENST00000585847 HERVK_113P63121 156 aa8.69□□□□□ -1.02
VMP1-202ENST00000585847 PMCHL2Q9BQD1 86 aa8.69□□□□□ -1.02
VMP1-202ENST00000585847 C11orf86A6NJI1 115 aa8.68□□□□□ -1.02
VMP1-202ENST00000585847 H3BRM9 83 aa8.68□□□□□ -1.02
VMP1-202ENST00000585847 Q6ZUT4 128 aa8.68□□□□□ -1.02
VMP1-202ENST00000585847 LY6G6CO95867 125 aa8.67□□□□□ -1.02
VMP1-202ENST00000585847 LYPD5Q6UWN5 251 aa8.67□□□□□ -1.02
VMP1-202ENST00000585847 CHAC1Q9BUX1 264 aa8.67□□□□□ -1.02
VMP1-202ENST00000585847 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
VMP1-202ENST00000585847 IGLV4-69A0A075B6H9 119 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 UBE2D1P51668 147 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 CCL18P55774 89 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 SPATA45Q537H7 98 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 LINC00476Q8WZB0 136 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 GEMIN7Q9H840 131 aaKnown RBP8.66□□□□□ -1.02
VMP1-202ENST00000585847 PAM16Q9Y3D7 125 aa8.66□□□□□ -1.02
VMP1-202ENST00000585847 TMEM262E9PQX1 116 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 DLEU1O43261 78 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 RBX1P62877 108 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 GAGE6Q13070 117 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 ESRGQ1W209 222 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.02
VMP1-202ENST00000585847 KMT2AQ03164 3969 aa8.65□□□□□ -1.03
VMP1-202ENST00000585847 E9PLD3 99 aa8.64□□□□□ -1.03
VMP1-202ENST00000585847 LINC01561Q8N1V8 128 aa8.64□□□□□ -1.03
VMP1-202ENST00000585847 UPK3BQ9BT76 320 aa8.64□□□□□ -1.03
VMP1-202ENST00000585847 MRPS16Q9Y3D3 137 aaKnown RBP8.64□□□□□ -1.03
VMP1-202ENST00000585847 LINC01556Q5JQF7 62 aa8.63□□□□□ -1.03
VMP1-202ENST00000585847 SFTA2Q6UW10 78 aa8.63□□□□□ -1.03
VMP1-202ENST00000585847 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
VMP1-202ENST00000585847 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
VMP1-202ENST00000585847 LINC00588Q9Y4M8 146 aa8.63□□□□□ -1.03
VMP1-202ENST00000585847 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
VMP1-202ENST00000585847 SS18Q15532 418 aa8.62□□□□□ -1.03
VMP1-202ENST00000585847 MPV17L2Q567V2 206 aa8.62□□□□□ -1.03
VMP1-202ENST00000585847 SLC25A34Q6PIV7 304 aa8.62□□□□□ -1.03
VMP1-202ENST00000585847 C10orf126Q8N4M7 172 aa8.62□□□□□ -1.03
VMP1-202ENST00000585847 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
VMP1-202ENST00000585847 PLEKHB2Q96CS7 222 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms