RNA–Protein interactions for RNA: ENST00000585553.5

ACBD4-205, Transcript of acyl-CoA binding domain containing 4, human

TSL 2

Gene ACBD4, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACBD4-205	ENST00000585553	LINC01600	Q96MT4	127 aa		13.68	□□□□□ -0.22
ACBD4-205	ENST00000585553		Q9UF83	564 aa		13.68	□□□□□ -0.22
ACBD4-205	ENST00000585553	FAM104A	Q969W3	186 aa		13.67	□□□□□ -0.22
ACBD4-205	ENST00000585553	SLC25A20	O43772	301 aa		13.67	□□□□□ -0.22
ACBD4-205	ENST00000585553	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.66	□□□□□ -0.22
ACBD4-205	ENST00000585553	ERG28	Q9UKR5	140 aa		13.66	□□□□□ -0.22
ACBD4-205	ENST00000585553	PYGO1	Q9Y3Y4	419 aa		13.66	□□□□□ -0.22
ACBD4-205	ENST00000585553	MUSTN1	Q8IVN3	82 aa		13.66	□□□□□ -0.22
ACBD4-205	ENST00000585553	C1orf158	Q8N1D5	194 aa		13.66	□□□□□ -0.22
ACBD4-205	ENST00000585553		A0A0J9YXV3	536 aa		13.65	□□□□□ -0.22
ACBD4-205	ENST00000585553	RS1	O15537	224 aa		13.65	□□□□□ -0.22
ACBD4-205	ENST00000585553	IGHV3-53	P01767	116 aa		13.65	□□□□□ -0.22
ACBD4-205	ENST00000585553	IGHV3OR16-12	A0A075B7B8	117 aa		13.64	□□□□□ -0.23
ACBD4-205	ENST00000585553	TRAV26-1	A0A087WT03	109 aa		13.63	□□□□□ -0.23
ACBD4-205	ENST00000585553	ANK3	Q12955	4377 aa	Known RBP	13.63	□□□□□ -0.23
ACBD4-205	ENST00000585553		A0A0J9YXY3	114 aa		13.63	□□□□□ -0.23
ACBD4-205	ENST00000585553		C9JAW5	83 aa		13.63	□□□□□ -0.23
ACBD4-205	ENST00000585553	DNAJC30	Q96LL9	226 aa		13.63	□□□□□ -0.23
ACBD4-205	ENST00000585553	IGHV3-64	A0A075B6Q5	118 aa		13.62	□□□□□ -0.23
ACBD4-205	ENST00000585553	SETX	Q7Z333	2677 aa	Known RBP	13.62	□□□□□ -0.23
ACBD4-205	ENST00000585553	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.61	□□□□□ -0.23
ACBD4-205	ENST00000585553	IL17D	Q8TAD2	202 aa		13.61	□□□□□ -0.23
ACBD4-205	ENST00000585553	CHCHD7	Q9BUK0	85 aa		13.61	□□□□□ -0.23
ACBD4-205	ENST00000585553	TRBV30	A0A0K0K1B3	111 aa		13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	HILS1	P60008	231 aa		13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	MRPS36	P82909	103 aa	Known RBP	13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	ATXN8	Q156A1	80 aa		13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	LITAF	Q99732	161 aa		13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	IGHV3-30-3	P0DP02	117 aa		13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	CMC4	P56277	68 aa	Predicted RBP	13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	CITED1	Q99966	193 aa		13.6	□□□□□ -0.23
ACBD4-205	ENST00000585553	NOTCH2	Q04721	2471 aa		13.59	□□□□□ -0.23
ACBD4-205	ENST00000585553	LINC01620	Q4KN68	170 aa		13.59	□□□□□ -0.23
ACBD4-205	ENST00000585553	TRGV1	A0A0A0MS02	117 aa		13.58	□□□□□ -0.24
ACBD4-205	ENST00000585553	SPANXA1	Q9NS26	97 aa		13.58	□□□□□ -0.24
ACBD4-205	ENST00000585553	NIPBL	Q6KC79	2804 aa	eCLIP	13.58	□□□□□ -0.24
ACBD4-205	ENST00000585553	IGHV3-38	A0A0C4DH36	116 aa		13.58	□□□□□ -0.24
ACBD4-205	ENST00000585553	RPL13A	P40429	203 aa	Known RBP	13.58	□□□□□ -0.24
ACBD4-205	ENST00000585553	UBE2D4	Q9Y2X8	147 aa		13.58	□□□□□ -0.24
ACBD4-205	ENST00000585553	JMJD1C	Q15652	2540 aa		13.57	□□□□□ -0.24
ACBD4-205	ENST00000585553	ADARB2-AS1	A8MUL3	147 aa		13.57	□□□□□ -0.24
ACBD4-205	ENST00000585553	IGLV1-51	P01701	117 aa		13.57	□□□□□ -0.24
ACBD4-205	ENST00000585553	RNASE13	Q5GAN3	156 aa	Known RBP	13.57	□□□□□ -0.24
ACBD4-205	ENST00000585553	TIMM21	Q9BVV7	248 aa		13.57	□□□□□ -0.24
ACBD4-205	ENST00000585553	NOTCH3	Q9UM47	2321 aa		13.57	□□□□□ -0.24
ACBD4-205	ENST00000585553	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.56	□□□□□ -0.24
ACBD4-205	ENST00000585553	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.56	□□□□□ -0.24
ACBD4-205	ENST00000585553	ZFAND6	Q6FIF0	208 aa		13.56	□□□□□ -0.24
ACBD4-205	ENST00000585553	SPANXD	Q9BXN6	97 aa		13.56	□□□□□ -0.24
ACBD4-205	ENST00000585553	SPANXC	Q9NY87	97 aa		13.56	□□□□□ -0.24
ACBD4-205	ENST00000585553	TRBV10-2	A0A0K0K1G8	114 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553		H7C2G1	150 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553	NDUFA7	O95182	113 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553	GIG44	P09565	113 aa	Predicted RBP	13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553	FAM110A	Q9BQ89	295 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553	IGHV1-58	A0A0C4DH39	117 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553		Q1RN00	199 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553	RNF183	Q96D59	192 aa		13.55	□□□□□ -0.24
ACBD4-205	ENST00000585553	TRIAP1	O43715	76 aa		13.54	□□□□□ -0.24
ACBD4-205	ENST00000585553		Q6ZTI0	123 aa		13.54	□□□□□ -0.24
ACBD4-205	ENST00000585553	NTN5	Q8WTR8	489 aa	Predicted RBP	13.54	□□□□□ -0.24
ACBD4-205	ENST00000585553	WFDC10A	Q9H1F0	79 aa		13.54	□□□□□ -0.24
ACBD4-205	ENST00000585553	SMR3A	Q99954	134 aa		13.54	□□□□□ -0.24
ACBD4-205	ENST00000585553	C19orf73	Q9NVV2	129 aa		13.54	□□□□□ -0.24
ACBD4-205	ENST00000585553	HIVEP2	P31629	2446 aa		13.53	□□□□□ -0.24
ACBD4-205	ENST00000585553	TRAV8-3	A0A0A6YYJ7	113 aa		13.53	□□□□□ -0.24
ACBD4-205	ENST00000585553	TINCR	A0A1B0GVN0	87 aa		13.52	□□□□□ -0.24
ACBD4-205	ENST00000585553	MIA	Q16674	131 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	VSIG2	Q96IQ7	327 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	TRAV4	A0A0B4J268	109 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	RPL35A	P18077	110 aa	Known RBP	13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	ADAMTSL4-AS1	Q5T5F5	129 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	ANAPC13	Q9BS18	74 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	NOP10	Q9NPE3	64 aa	Known RBP	13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	NDUFA12	Q9UI09	145 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	ICOS	Q9Y6W8	199 aa		13.51	□□□□□ -0.25
ACBD4-205	ENST00000585553	TRBV10-1	A0A0K0K1A3	114 aa		13.5	□□□□□ -0.25
ACBD4-205	ENST00000585553	DAZ2	Q13117	558 aa	Known RBP	13.5	□□□□□ -0.25
ACBD4-205	ENST00000585553		K7EQD1	137 aa		13.49	□□□□□ -0.25
ACBD4-205	ENST00000585553	RPL36A	P83881	106 aa	Known RBP	13.49	□□□□□ -0.25
ACBD4-205	ENST00000585553		Q6Q795	121 aa		13.49	□□□□□ -0.25
ACBD4-205	ENST00000585553	RPL36AL	Q969Q0	106 aa	Known RBP	13.49	□□□□□ -0.25
ACBD4-205	ENST00000585553	TEX49	A0A1B0GTD5	131 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553	TIMM17B	O60830	172 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553	SNCG	O76070	127 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553	C16orf74	Q96GX8	76 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553		A8MZ25	164 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553		H3BT86	120 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553	PRSS2	P07478	247 aa		13.48	□□□□□ -0.25
ACBD4-205	ENST00000585553	PLAC8L1	A1L4L8	177 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	DGAT2L7P	Q6IED9	249 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	UBE2W	Q96B02	151 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	COX6C	P09669	75 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	NHLRC4	P0CG21	123 aa	Predicted RBP	13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	GAGE2B	Q13066	116 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	GAGE2E	Q4V326	116 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	CSNK1G2-AS1	Q8NCQ2	148 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	GAGE2D	Q9UEU5	116 aa		13.47	□□□□□ -0.25
ACBD4-205	ENST00000585553	TRAV8-4	A0A0B4J246	113 aa		13.46	□□□□□ -0.25
ACBD4-205	ENST00000585553		H7C423	109 aa		13.46	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms