RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
TOP3A-217ENST00000584582 LINC00158P58513 81 aa8.23□□□□□ -1.09
TOP3A-217ENST00000584582 Q9H8V8 135 aa8.23□□□□□ -1.09
TOP3A-217ENST00000584582 IGLV10-54A0A075B6I4 117 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 TRBV7-3A0A075B6L6 115 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 LY6G6DO95868 133 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 RNASE1P07998 156 aaKnown RBP8.22□□□□□ -1.09
TOP3A-217ENST00000584582 ZNF22P17026 224 aaPredicted RBP8.22□□□□□ -1.09
TOP3A-217ENST00000584582 C1QTNF4Q9BXJ3 329 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 COX6CP09669 75 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 MORN3Q6PF18 240 aaPredicted RBP8.22□□□□□ -1.09
TOP3A-217ENST00000584582 SLC25A29Q8N8R3 303 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 HIGD1BQ9P298 99 aa8.22□□□□□ -1.09
TOP3A-217ENST00000584582 FAM19A4Q96LR4 140 aa8.21□□□□□ -1.09
TOP3A-217ENST00000584582 TMEM243Q9BU79 118 aa8.21□□□□□ -1.09
TOP3A-217ENST00000584582 PRO1854Q9UHT4 67 aa8.21□□□□□ -1.09
TOP3A-217ENST00000584582 F5H768 121 aa8.21□□□□□ -1.1
TOP3A-217ENST00000584582 XCL1P47992 114 aa8.21□□□□□ -1.1
TOP3A-217ENST00000584582 C1orf158Q8N1D5 194 aa8.21□□□□□ -1.1
TOP3A-217ENST00000584582 ODF3Q96PU9 254 aa8.21□□□□□ -1.1
TOP3A-217ENST00000584582 ZMAT4Q9H898 229 aa8.21□□□□□ -1.1
TOP3A-217ENST00000584582 IGLV4-69A0A075B6H9 119 aa8.2□□□□□ -1.1
TOP3A-217ENST00000584582 TENM4Q6N022 2769 aa8.2□□□□□ -1.1
TOP3A-217ENST00000584582 NBPF19A0A087WUL8 3843 aa8.2□□□□□ -1.1
TOP3A-217ENST00000584582 K7EQD1 137 aa8.2□□□□□ -1.1
TOP3A-217ENST00000584582 NXPH4O95158 308 aa8.2□□□□□ -1.1
TOP3A-217ENST00000584582 PRSS47A8MTI9 375 aa8.19□□□□□ -1.1
TOP3A-217ENST00000584582 BRI3O95415 125 aa8.19□□□□□ -1.1
TOP3A-217ENST00000584582 GYPEP15421 78 aa8.19□□□□□ -1.1
TOP3A-217ENST00000584582 LINC00694P0DN24 101 aa8.18□□□□□ -1.1
TOP3A-217ENST00000584582 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
TOP3A-217ENST00000584582 LEPROTO15243 131 aa8.18□□□□□ -1.1
TOP3A-217ENST00000584582 KLK9Q2XQG4 91 aa8.18□□□□□ -1.1
TOP3A-217ENST00000584582 C6orf226Q5I0X4 101 aa8.18□□□□□ -1.1
TOP3A-217ENST00000584582 TMEM263Q8WUH6 116 aaKnown RBP8.18□□□□□ -1.1
TOP3A-217ENST00000584582 TAL2Q16559 108 aa8.17□□□□□ -1.1
TOP3A-217ENST00000584582 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
TOP3A-217ENST00000584582 PAX4O43316 350 aa8.17□□□□□ -1.1
TOP3A-217ENST00000584582 TSPAN13O95857 204 aa8.17□□□□□ -1.1
TOP3A-217ENST00000584582 TMEM86BQ8N661 226 aa8.17□□□□□ -1.1
TOP3A-217ENST00000584582 HIVEP1P15822 2718 aa8.17□□□□□ -1.1
TOP3A-217ENST00000584582 CR1P17927 2039 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 A0A0J9YXY3 114 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 DAD1P61803 113 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 FSHBP01225 129 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 NDUFA11Q86Y39 141 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 SPANXA1Q9NS26 97 aa8.16□□□□□ -1.1
TOP3A-217ENST00000584582 TMEM223A0PJW6 202 aa8.15□□□□□ -1.1
TOP3A-217ENST00000584582 CFC1BP0CG36 223 aa8.15□□□□□ -1.1
TOP3A-217ENST00000584582 CFC1P0CG37 223 aa8.15□□□□□ -1.1
TOP3A-217ENST00000584582 RPL13AP40429 203 aaKnown RBP8.15□□□□□ -1.1
TOP3A-217ENST00000584582 POM121L12Q8N7R1 296 aa8.15□□□□□ -1.1
TOP3A-217ENST00000584582 MALP21145 153 aa8.15□□□□□ -1.1
TOP3A-217ENST00000584582 INSL3P51460 131 aa8.15□□□□□ -1.1
TOP3A-217ENST00000584582 ANGP03950 147 aaKnown RBP8.15□□□□□ -1.11
TOP3A-217ENST00000584582 TRAV25A0A0B4J276 109 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 C10orf126Q8N4M7 172 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 C16orf74Q96GX8 76 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 VSIG2Q96IQ7 327 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
TOP3A-217ENST00000584582 CMC4P56277 68 aaPredicted RBP8.14□□□□□ -1.11
TOP3A-217ENST00000584582 HILS1P60008 231 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 KRTAP1-3Q8IUG1 177 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 IGHV1-58A0A0C4DH39 117 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 CLEC2BQ92478 149 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 UBE2D4Q9Y2X8 147 aa8.14□□□□□ -1.11
TOP3A-217ENST00000584582 FAM222AQ5U5X8 452 aa8.13□□□□□ -1.11
TOP3A-217ENST00000584582 TCL1BO95988 128 aa8.13□□□□□ -1.11
TOP3A-217ENST00000584582 COX6A2Q02221 97 aa8.13□□□□□ -1.11
TOP3A-217ENST00000584582 HERVK_113P63121 156 aa8.13□□□□□ -1.11
TOP3A-217ENST00000584582 C3orf56Q8N813 242 aa8.13□□□□□ -1.11
TOP3A-217ENST00000584582 SVIPQ8NHG7 77 aa8.13□□□□□ -1.11
TOP3A-217ENST00000584582 F8W1H4 67 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 C2orf82Q6UX34 121 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 RNF152Q8N8N0 203 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 SIGMAR1Q99720 223 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 FAM110AQ9BQ89 295 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 C11orf72Q8NBR9 251 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 ATP6V0E2Q8NHE4 81 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 CHCHD7Q9BUK0 85 aa8.12□□□□□ -1.11
TOP3A-217ENST00000584582 RS1O15537 224 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 CKS1BP61024 79 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
TOP3A-217ENST00000584582 SLC25A20O43772 301 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 MRAPQ8TCY5 172 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 TRAV4A0A0B4J268 109 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 IGHV3-30P01768 117 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 IGHV3-30-5P0DP03 117 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 DAZ2Q13117 558 aaKnown RBP8.11□□□□□ -1.11
TOP3A-217ENST00000584582 DEFB121Q5J5C9 76 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 DAZ4Q86SG3 579 aaKnown RBP8.11□□□□□ -1.11
TOP3A-217ENST00000584582 DNAJC30Q96LL9 226 aa8.11□□□□□ -1.11
TOP3A-217ENST00000584582 DAZ3Q9NR90 486 aaKnown RBP8.11□□□□□ -1.11
TOP3A-217ENST00000584582 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
TOP3A-217ENST00000584582 LINC00526Q96FQ7 95 aa8.1□□□□□ -1.11
TOP3A-217ENST00000584582 PRB2P02812 416 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-217ENST00000584582 NSD1Q96L73 2696 aaPredicted RBP8.1□□□□□ -1.11
TOP3A-217ENST00000584582 OXLD1Q5BKU9 147 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms