RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 SHROOM2Q13796 1616 aa-0.46□□□□□ -2.48
SKA2-210ENST00000584089 KIAA1551Q9HCM1 1747 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 ZNF236Q9UL36 1845 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 ARHGEF12Q9NZN5 1544 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 NEBP20929 6669 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 NDUFB6O95139 128 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 SIX6O95475 246 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 MT-ND4LP03901 98 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 GNG10P50151 68 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 HIST1H1AQ02539 215 aaPredicted RBP-0.47□□□□□ -2.48
SKA2-210ENST00000584089 KLK9Q2XQG4 91 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 KRTAP20-2Q3LI61 65 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 SMIM15Q7Z3B0 74 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 AGPAT4-IT1Q9H0P7 198 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 NPVFQ9HCQ7 196 aa-0.47□□□□□ -2.48
SKA2-210ENST00000584089 PAPPA2Q9BXP8 1791 aa-0.47□□□□□ -2.49
SKA2-210ENST00000584089 PPIP5K1Q6PFW1 1433 aa-0.47□□□□□ -2.49
SKA2-210ENST00000584089 CCDC141Q6ZP82 1450 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 MAGI1Q96QZ7 1491 aaPredicted RBP-0.48□□□□□ -2.49
SKA2-210ENST00000584089 DIP2CQ9Y2E4 1556 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 SETBP1Q9Y6X0 1596 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 M0R135 149 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 UQCR11O14957 56 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 APOC3P02656 99 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 IL5P05113 134 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 NBEAP1P0C6P0 100 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 SCGB1A1P11684 91 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 CMPK1P30085 196 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 GUCA1AP43080 201 aaPredicted RBP-0.48□□□□□ -2.49
SKA2-210ENST00000584089 B2MP61769 119 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 RRAS2P62070 204 aaPredicted RBP-0.48□□□□□ -2.49
SKA2-210ENST00000584089 HAMPP81172 84 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 C12orf73Q69YU5 71 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 Q6AWC8 147 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 Q6JHZ5 121 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 Q6ZUT4 128 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 SPTSSAQ969W0 71 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 PSMG3Q9BT73 122 aaPredicted RBP-0.48□□□□□ -2.49
SKA2-210ENST00000584089 GSKIPQ9P0R6 139 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 LINC00312Q9Y6C7 94 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 XRN1Q8IZH2 1706 aaKnown RBP-0.48□□□□□ -2.49
SKA2-210ENST00000584089 DNAH6Q9C0G6 4158 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 FHAD1B1AJZ9 1412 aa-0.48□□□□□ -2.49
SKA2-210ENST00000584089 SMG6Q86US8 1419 aaKnown RBP-0.48□□□□□ -2.49
SKA2-210ENST00000584089 PTPN23Q9H3S7 1636 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 CEP152O94986 1710 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 NUP188Q5SRE5 1749 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 TACC2O95359 2948 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 TRBV7-4A0A0J9YYF1 115 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 CTXND1A0A1B0GTU2 59 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 PPP1R17O96001 155 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 TNFP01375 233 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 IFNGP01579 166 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 FABP1P07148 127 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 COX8AP10176 69 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 UBE2G1P62253 170 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 TMEM170BQ5T4T1 132 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 MIC13Q5XKP0 118 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 CDC26Q8NHZ8 85 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 AQP10Q96PS8 301 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 V9GYH0 126 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 MYH7P12883 1935 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 POLA1P09884 1462 aaPredicted RBP-0.49□□□□□ -2.49
SKA2-210ENST00000584089 GRIN2AQ12879 1464 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 MRC2Q9UBG0 1479 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 SYNJ1O43426 1573 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 ADAMTS12P58397 1594 aa-0.49□□□□□ -2.49
SKA2-210ENST00000584089 ARAP2Q8WZ64 1704 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 BTAF1O14981 1849 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 PSME4Q14997 1843 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 PKHD1L1Q86WI1 4243 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 FAM186AA6NE01 2351 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 TRAV13-2A0A0B4J235 113 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 LOC285095A0A1B0GVY8 99 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 J3QR89 54 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 PITX3O75364 302 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 G0S2P27469 103 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 DEFB135Q30KP9 77 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 TAC4Q86UU9 113 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 BAGE2Q86Y30 109 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 COPS9Q8WXC6 57 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 TCEAL4Q96EI5 215 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 USMG5Q96IX5 58 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 SPRR2FQ96RM1 72 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 TMEM191AQ9H0A3 160 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 USH2AO75445 5202 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 PKD1P98161 4303 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 CFTRP13569 1480 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 ARHGEF5Q12774 1597 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 COL4A6Q14031 1691 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 UBR4Q5T4S7 5183 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 MARF1Q9Y4F3 1742 aaKnown RBP-0.5□□□□□ -2.49
SKA2-210ENST00000584089 ACACAQ13085 2346 aa-0.5□□□□□ -2.49
SKA2-210ENST00000584089 FAM236AA0A1B0GUQ0 79 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 FAM236BA0A1B0GV22 79 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 GNG14A0A1W2PPG7 69 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 LRRC37AA6NMS7 1700 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 F8VRH5 84 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 CEP290O15078 2479 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 SNCGO76070 127 aa-0.51□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms