RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 VCYO14598 125 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 NPYP01303 97 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 SUMO2P61956 95 aaKnown RBP5.69□□□□□ -1.5
ERBB2-216ENST00000584014 ELOBQ15370 118 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 TTC32Q5I0X7 151 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 NRACQ8N912 160 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 TMEM243Q9BU79 118 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 TMEM70Q9BUB7 260 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 MRPL18Q9H0U6 180 aaKnown RBP5.69□□□□□ -1.5
ERBB2-216ENST00000584014 Q9HAA7 133 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 SMCO4Q9NRQ5 59 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 ALMS1Q8TCU4 4167 aa5.69□□□□□ -1.5
ERBB2-216ENST00000584014 SCO1O75880 301 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 HLA-DQA1P01909 254 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 C1orf134Q5TEV5 83 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 AMMECR1LQ6DCA0 310 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 Q8N976 141 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 TRAPPC1Q9Y5R8 145 aa5.68□□□□□ -1.5
ERBB2-216ENST00000584014 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.67□□□□□ -1.5
ERBB2-216ENST00000584014 IGKV3OR2-268A0A0C4DH90 116 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 TRBV6-5A0A0K0K1A5 114 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 IGKV2-29A2NJV5 120 aaPredicted RBP5.67□□□□□ -1.5
ERBB2-216ENST00000584014 ANGP03950 147 aaKnown RBP5.67□□□□□ -1.5
ERBB2-216ENST00000584014 DNAH10OSP0CZ25 163 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 RAB5AP20339 215 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 XP32Q5T750 250 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 CLPSL2Q6UWE3 100 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 GNB1LQ9BYB4 327 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 KRTAP1-5Q9BYS1 174 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 MAP1LC3AQ9H492 121 aa5.67□□□□□ -1.5
ERBB2-216ENST00000584014 B5MCH6 92 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 TSHBP01222 138 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 MT-ND6P03923 174 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 POLR2KP53803 58 aaKnown RBP5.66□□□□□ -1.5
ERBB2-216ENST00000584014 RPL32P62910 135 aaKnown RBP5.66□□□□□ -1.5
ERBB2-216ENST00000584014 IQCJQ1A5X6 159 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 MPV17L2Q567V2 206 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 LINC01556Q5JQF7 62 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 LINC00336Q6ZUF6 198 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 C6orf223Q8N319 242 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 UBE2WQ96B02 151 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 C20orf78Q9BR46 151 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 SMIM2Q9BVW6 85 aa5.66□□□□□ -1.5
ERBB2-216ENST00000584014 TRBV24-1A0A075B6N3 115 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 PSCAO43653 123 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 CRPP02741 224 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 PKIAP61925 76 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 Q6ZR54 194 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 C10orf126Q8N4M7 172 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
ERBB2-216ENST00000584014 VPS13DQ5THJ4 4388 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 IGKV2D-24A0A075B6R9 120 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 PHOX2AO14813 284 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 FGF6P10767 208 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 IFI27P40305 119 aaPredicted RBP5.64□□□□□ -1.51
ERBB2-216ENST00000584014 LINC00269Q8N2A0 174 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 C14orf144Q96I85 54 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 TMEM101Q96IK0 257 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 VPS25Q9BRG1 176 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
ERBB2-216ENST00000584014 DNAH1Q9P2D7 4330 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 IGLV4-60A0A075B6I1 120 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 IGLV10-54A0A075B6I4 117 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 IBA57-AS1B1ANH7 110 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 AKR1D1P51857 326 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 Q8N8P6 123 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 OR5A1Q8NGJ0 315 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 BAALCQ8WXS3 180 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 LAMTOR2Q9Y2Q5 125 aa5.63□□□□□ -1.51
ERBB2-216ENST00000584014 TRAV8-3A0A0A6YYJ7 113 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 K7ERU9 68 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 RTL8CO15255 209 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 RPL39P62891 51 aaKnown RBP5.62□□□□□ -1.51
ERBB2-216ENST00000584014 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
ERBB2-216ENST00000584014 FA2HQ7L5A8 372 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 NFE4Q86UQ8 179 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 TMEM18Q96B42 140 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 YPEL4Q96NS1 127 aa5.62□□□□□ -1.51
ERBB2-216ENST00000584014 TRGC2P03986 189 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 ESDP10768 282 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 REG3AQ06141 175 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 LAGE3Q14657 143 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 PMVKQ15126 192 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 TAL2Q16559 108 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 C20orf203Q8NBC4 194 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 RMI2Q96E14 147 aa5.61□□□□□ -1.51
ERBB2-216ENST00000584014 NXT2Q9NPJ8 142 aaKnown RBP5.61□□□□□ -1.51
ERBB2-216ENST00000584014 HYDINQ4G0P3 5121 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 COLCA2A8K830 154 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 H7C423 109 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 LECT2O14960 151 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 SMAGPQ0VAQ4 97 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 Q0VG73 95 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 ENHOQ6UWT2 76 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 OPRPNQ99935 248 aaPredicted RBP5.6□□□□□ -1.51
ERBB2-216ENST00000584014 TM2D2Q9BX73 214 aa5.6□□□□□ -1.51
ERBB2-216ENST00000584014 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms