RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 LOC100131303A0A0U1RQF7 123 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 SIVA1O15304 175 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 SEC11AP67812 179 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 RNASE13Q5GAN3 156 aaKnown RBP3.9□□□□□ -1.79
CRLF3-204ENST00000583527 CEMP1Q6PRD7 247 aaPredicted RBP3.9□□□□□ -1.79
CRLF3-204ENST00000583527 DAZ4Q86SG3 579 aaKnown RBP3.9□□□□□ -1.79
CRLF3-204ENST00000583527 LURAP1LQ8IV03 231 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 WFDC9Q8NEX5 89 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 ZNRF2Q8NHG8 242 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 AMELXQ99217 191 aa3.9□□□□□ -1.79
CRLF3-204ENST00000583527 DAZ3Q9NR90 486 aaKnown RBP3.9□□□□□ -1.79
CRLF3-204ENST00000583527 ZMAT5Q9UDW3 170 aaKnown RBP3.9□□□□□ -1.79
CRLF3-204ENST00000583527 TRBV25-1A0A075B6N4 114 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 TRBV6-4A0A1B0GX49 114 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 SMIM9A6NGZ8 99 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 ZNF815PA8K554 130 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 CIDEAO60543 219 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 IGHV4-30-4P0DP06 118 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 DEFB130BP0DP73 79 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 DEFB130AP0DP74 79 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 ZNF25P17030 456 aaPredicted RBP3.89□□□□□ -1.79
CRLF3-204ENST00000583527 GCSHP23434 173 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 MRPS36P82909 103 aaKnown RBP3.89□□□□□ -1.79
CRLF3-204ENST00000583527 TMEM170BQ5T4T1 132 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 FAM222AQ5U5X8 452 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 SHISA2Q6UWI4 295 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 SBSPONQ8IVN8 264 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 Q8NAQ8 132 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 TMEM243Q9BU79 118 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 TIMM21Q9BVV7 248 aa3.89□□□□□ -1.79
CRLF3-204ENST00000583527 A0A0J9YXV3 536 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 MYMXA0A1B0GTQ4 84 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 LYRM9A8MSI8 78 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 TAX1BP3O14907 124 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 UBE2D1P51668 147 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 CRYBA4P53673 196 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 FXYD2P54710 66 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 FHL2Q14192 279 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 C4orf48Q5BLP8 95 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 NTM-AS1Q6ZSK4 140 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 Q6ZVH6 145 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 PRIMA1Q86XR5 153 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 C3orf56Q8N813 242 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 MAPKAPK5-AS1Q8N8E1 139 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 ORAOV1Q8WV07 137 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 PLEKHB2Q96CS7 222 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 VCX2Q9H322 139 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 CELA1Q9UNI1 258 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 COX11Q9Y6N1 276 aa3.88□□□□□ -1.79
CRLF3-204ENST00000583527 IGHV3-64A0A075B6Q5 118 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 IGLV5-45A0A087WSX0 123 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 A6NDN8 102 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 J3QQQ9 107 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 K7ERJ3 54 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 UBE2L6O14933 153 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 DEFB4AO15263 64 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 MIFP14174 115 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 LGALS3P17931 250 aaKnown RBP3.87□□□□□ -1.79
CRLF3-204ENST00000583527 EGFEM1PQ0D2K5 195 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 SMAGPQ0VAQ4 97 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 OR5A1Q8NGJ0 315 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 RETNQ9HD89 108 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 DNAH1Q9P2D7 4330 aa3.87□□□□□ -1.79
CRLF3-204ENST00000583527 DYNC2H1Q8NCM8 4307 aaKnown RBP3.86□□□□□ -1.79
CRLF3-204ENST00000583527 PRKDCP78527 4128 aaKnown RBP3.86□□□□□ -1.79
CRLF3-204ENST00000583527 TINCRA0A1B0GVN0 87 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 K7EP13 123 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 LEPROTO15243 131 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 GYPEP15421 78 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 KRTAP10-11P60412 298 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 TAL2Q16559 108 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 OXLD1Q5BKU9 147 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 AMMECR1LQ6DCA0 310 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 CEND1Q8N111 149 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 RNF183Q96D59 192 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 GTSF1LQ9H1H1 148 aa3.86□□□□□ -1.79
CRLF3-204ENST00000583527 GEMIN7Q9H840 131 aaKnown RBP3.86□□□□□ -1.79
CRLF3-204ENST00000583527 TRBV6-8A0A0A6YYG3 113 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 A0A0J9YY99 117 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 TEX48A0A1B0GUV7 120 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 SPINK8P0C7L1 97 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 IGHV3-30-3P0DP02 117 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 DAD1P61803 113 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 GAGE6Q13070 117 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 C10orf126Q8N4M7 172 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 TMEM101Q96IK0 257 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 HIST1H4GQ99525 98 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 TM2D2Q9BX73 214 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 NHP2Q9NX24 153 aaKnown RBP3.85□□□□□ -1.79
CRLF3-204ENST00000583527 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
CRLF3-204ENST00000583527 CSDC2Q9Y534 153 aaKnown RBP3.85□□□□□ -1.79
CRLF3-204ENST00000583527 TRAV8-3A0A0A6YYJ7 113 aa3.84□□□□□ -1.79
CRLF3-204ENST00000583527 TRAV13-1A0A0B4J241 112 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms