RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 IGHV3-30P01768 117 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 CFC1BP0CG36 223 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 CFC1P0CG37 223 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 IGHV3-30-5P0DP03 117 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 HERVK_113P61574 105 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 ADAMTSL4-AS1Q5T5F5 129 aa7.66□□□□□ -1.18
CDK5RAP3-225ENST00000582482 IGKV3OR2-268A0A0C4DH90 116 aa7.65□□□□□ -1.18
CDK5RAP3-225ENST00000582482 IGHV3-30-3P0DP02 117 aa7.65□□□□□ -1.18
CDK5RAP3-225ENST00000582482 ETDBQ3ZM63 59 aa7.65□□□□□ -1.18
CDK5RAP3-225ENST00000582482 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
CDK5RAP3-225ENST00000582482 ZNF418Q8TF45 676 aaPredicted RBP7.65□□□□□ -1.18
CDK5RAP3-225ENST00000582482 PSMB2P49721 201 aa7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 MUSTN1Q8IVN3 82 aa7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 SLC25A29Q8N8R3 303 aa7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TSSC4Q9Y5U2 329 aaPredicted RBP7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 A4D1N5 150 aa7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 DEFB4AO15263 64 aa7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 NFE4Q86UQ8 179 aa7.64□□□□□ -1.19
CDK5RAP3-225ENST00000582482 RS1O15537 224 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 LINC00482Q8N8I6 264 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 C19orf73Q9NVV2 129 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 CDKN2A-AS1Q9UH64 79 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TRAV13-1A0A0B4J241 112 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 PLAC8L1A1L4L8 177 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 UBE2D1P51668 147 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 NDUFA11Q86Y39 141 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 OR5A1Q8NGJ0 315 aa7.63□□□□□ -1.19
CDK5RAP3-225ENST00000582482 RNASE1P07998 156 aaKnown RBP7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TAL2Q16559 108 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TMEM86BQ8N661 226 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TIMM21Q9BVV7 248 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 ANK2Q01484 3957 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 A0A0J9YXY3 114 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 A0A1B0GWB2 263 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TMEM238C9JI98 176 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 INAFM1C9JVW0 142 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 LEPROTO15243 131 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 LY6G6DO95868 133 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 PRSS2P07478 247 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
CDK5RAP3-225ENST00000582482 A0A096LPF7 62 aa7.61□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TRGV2A0A075B6R0 118 aa7.61□□□□□ -1.19
CDK5RAP3-225ENST00000582482 DEFB130BP0DP73 79 aa7.61□□□□□ -1.19
CDK5RAP3-225ENST00000582482 DEFB130AP0DP74 79 aa7.61□□□□□ -1.19
CDK5RAP3-225ENST00000582482 PRO0461Q9UI25 63 aa7.61□□□□□ -1.19
CDK5RAP3-225ENST00000582482 TCL1BO95988 128 aa7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 IL17DQ8TAD2 202 aa7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 G3V4G9 280 aa7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 MRPS36P82909 103 aaKnown RBP7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 LITAFQ99732 161 aa7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 SPANXB1Q9NS25 103 aaPredicted RBP7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 STAB1Q9NY15 2570 aa7.6□□□□□ -1.19
CDK5RAP3-225ENST00000582482 IGLV1-51P01701 117 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 PAPPA-AS1Q5QFB9 102 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 K7EQD1 137 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 K7ERU9 68 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 HILS1P60008 231 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 NDUFA12Q9UI09 145 aa7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 FBN1P35555 2871 aaKnown RBP7.59□□□□□ -1.19
CDK5RAP3-225ENST00000582482 GEMIN7Q9H840 131 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-225ENST00000582482 GAGE6Q13070 117 aa7.58□□□□□ -1.2
CDK5RAP3-225ENST00000582482 CSNK1G2-AS1Q8NCQ2 148 aa7.58□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TMEM263Q8WUH6 116 aaKnown RBP7.58□□□□□ -1.2
CDK5RAP3-225ENST00000582482 LINC00242Q5T6M2 205 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TMEM101Q96IK0 257 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 VSIG2Q96IQ7 327 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 PYGO1Q9Y3Y4 419 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 IGHV1-58A0A0C4DH39 117 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 CRLF1O75462 422 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 F8P00451 2351 aa7.57□□□□□ -1.2
CDK5RAP3-225ENST00000582482 SCGB1C2P0DMR2 95 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 Q1RN00 199 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 CLPSL2Q6UWE3 100 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 Q8N3U1 123 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TEX29Q8N6K0 151 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 IGLV4-60A0A075B6I1 120 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TRAV25A0A0B4J276 109 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 CIDEAO60543 219 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 GHRHP01286 108 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 GTSF1LQ9H1H1 148 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 C16orf95Q9H693 158 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 EDA2RQ9HAV5 297 aa7.56□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TRGV4A0A0C4DH28 118 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TINCRA0A1B0GVN0 87 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 UBE2D3P61077 147 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 UBE2D2P62837 147 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 RPL36AP83881 106 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 RPL36ALQ969Q0 106 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 PRO1854Q9UHT4 67 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TENM3Q9P273 2699 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 IGHV3-33P01772 117 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 C11orf68Q9H3H3 251 aaKnown RBP7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 SPANXA1Q9NS26 97 aa7.55□□□□□ -1.2
CDK5RAP3-225ENST00000582482 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
CDK5RAP3-225ENST00000582482 Q9H8V8 135 aa7.54□□□□□ -1.2
CDK5RAP3-225ENST00000582482 TRAV4A0A0B4J268 109 aa7.54□□□□□ -1.2
CDK5RAP3-225ENST00000582482 NOTCH1P46531 2555 aa7.53□□□□□ -1.2
CDK5RAP3-225ENST00000582482 MAST4O15021 2626 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms