RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SBSPONQ8IVN8 264 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 OR5A1Q8NGJ0 315 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 ATP6V0E2Q8NHE4 81 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 OPRPNQ99935 248 aaPredicted RBP6.58□□□□□ -1.36
SS18-220ENST00000582092 SPATA25Q9BR10 227 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 CHCHD7Q9BUK0 85 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 TIMM21Q9BVV7 248 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 Q9UF83 564 aa6.58□□□□□ -1.36
SS18-220ENST00000582092 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
SS18-220ENST00000582092 C11orf86A6NJI1 115 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 F5H768 121 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 SEC11AP67812 179 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 COL5A1-AS1Q5SY13 56 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 BOD1L2Q8IYS8 172 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 LINC00612Q8N6U2 182 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 CHCHD5Q9BSY4 110 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 CHAC1Q9BUX1 264 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 UBE2D4Q9Y2X8 147 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 NACAE9PAV3 2078 aa6.57□□□□□ -1.36
SS18-220ENST00000582092 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
SS18-220ENST00000582092 H3BRM9 83 aa6.56□□□□□ -1.36
SS18-220ENST00000582092 FGF6P10767 208 aa6.56□□□□□ -1.36
SS18-220ENST00000582092 LGALS3P17931 250 aaKnown RBP6.56□□□□□ -1.36
SS18-220ENST00000582092 MRPS36P82909 103 aaKnown RBP6.56□□□□□ -1.36
SS18-220ENST00000582092 CEMP1Q6PRD7 247 aaPredicted RBP6.56□□□□□ -1.36
SS18-220ENST00000582092 SH2D6Q7Z4S9 175 aa6.56□□□□□ -1.36
SS18-220ENST00000582092 SNHG12Q9BXW3 62 aa6.56□□□□□ -1.36
SS18-220ENST00000582092 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 E9PLD3 99 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 TMEM262E9PQX1 116 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 C3orf84H3BNL1 204 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 ZNF25P17030 456 aaPredicted RBP6.55□□□□□ -1.36
SS18-220ENST00000582092 GAGE6Q13070 117 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 SCGB1D4Q6XE38 83 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 NFE4Q86UQ8 179 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 PCP2Q8IVA1 136 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 Q8NAQ8 132 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 PLEKHB2Q96CS7 222 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 AMELXQ99217 191 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 TM2D3Q9BRN9 247 aa6.55□□□□□ -1.36
SS18-220ENST00000582092 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 TRBV6-8A0A0A6YYG3 113 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 A0A0J9YY99 117 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 MYMXA0A1B0GTQ4 84 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 TINCRA0A1B0GVN0 87 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 A6NDN8 102 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 ZNF815PA8K554 130 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 EREGO14944 169 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 HSD52Q0P140 79 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 MRPL23Q16540 153 aaKnown RBP6.54□□□□□ -1.36
SS18-220ENST00000582092 RNASE13Q5GAN3 156 aaKnown RBP6.54□□□□□ -1.36
SS18-220ENST00000582092 LINC00469Q8N7U9 141 aa6.54□□□□□ -1.36
SS18-220ENST00000582092 CSDC2Q9Y534 153 aaKnown RBP6.54□□□□□ -1.36
SS18-220ENST00000582092 IGKV2D-26A0A0A0MRZ7 120 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 LEPROTO15243 131 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 PTTG1IPP53801 180 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 HERVK_113P63121 156 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 MPV17L2Q567V2 206 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 NTM-AS1Q6ZSK4 140 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 Q6ZUT4 128 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 MUC7Q8TAX7 377 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 HIST1H4GQ99525 98 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 HIGD1BQ9P298 99 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
SS18-220ENST00000582092 TRAV13-1A0A0B4J241 112 aa6.52□□□□□ -1.37
SS18-220ENST00000582092 SRSF9Q13242 221 aaKnown RBP eCLIP6.52□□□□□ -1.37
SS18-220ENST00000582092 COL7A1Q02388 2944 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 TRAV26-1A0A087WT03 109 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 A0A096LPF7 62 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 TMEM223A0PJW6 202 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 J3QQQ9 107 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 ZNF22P17026 224 aaPredicted RBP6.51□□□□□ -1.37
SS18-220ENST00000582092 GCSHP23434 173 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 TIRAPP58753 221 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 TAL2Q16559 108 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 BVES-AS1Q5T3Y7 98 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 C2orf91Q6ZV80 131 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 ORAOV1Q8WV07 137 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 RETNQ9HD89 108 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 CELA1Q9UNI1 258 aa6.51□□□□□ -1.37
SS18-220ENST00000582092 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 IGKV3OR2-268A0A0C4DH90 116 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 LINC00694P0DN24 101 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 UBE2D1P51668 147 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 MAPKAPK5-AS1Q8N8E1 139 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 TTTY13Q9BZ97 58 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 C11orf68Q9H3H3 251 aaKnown RBP6.5□□□□□ -1.37
SS18-220ENST00000582092 CDC42SE2Q9NRR3 84 aa6.5□□□□□ -1.37
SS18-220ENST00000582092 A0A1B0GV90 55 aa6.49□□□□□ -1.37
SS18-220ENST00000582092 SS18Q15532 418 aa6.49□□□□□ -1.37
SS18-220ENST00000582092 C11orf45Q8TAV5 145 aa6.49□□□□□ -1.37
SS18-220ENST00000582092 VSIG2Q96IQ7 327 aa6.49□□□□□ -1.37
SS18-220ENST00000582092 TP73-AS1Q9UF72 201 aa6.49□□□□□ -1.37
SS18-220ENST00000582092 IGHV1-58A0A0C4DH39 117 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 A0A0J9YWU9 116 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 TMEM238LA0A1B0GVL6 79 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 A6NJY4 79 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 SMIM13P0DJ93 91 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 C12orf74Q32Q52 190 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms