RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 TRAV8-4A0A0B4J246 113 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 CRLF1O75462 422 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 NDUFA7O95182 113 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 ANAPC13Q9BS18 74 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 RS1O15537 224 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 SNCGO76070 127 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 FSHBP01225 129 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 DEFB114Q30KQ6 69 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 BEAN1Q3B7T3 259 aa9.87□□□□□ -0.83
RNF43-205ENST00000581868 TRGV1A0A0A0MS02 117 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 TRAV4A0A0B4J268 109 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 CITED1Q99966 193 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 Q9H8V8 135 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 CHD6Q8TD26 2715 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 NOTCH3Q9UM47 2321 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 NDUFA1O15239 70 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 C11orf44Q8N8P7 122 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 C4orf3Q8WVX3 66 aa9.86□□□□□ -0.83
RNF43-205ENST00000581868 PTPN13Q12923 2485 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 TRAV13-1A0A0B4J241 112 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 TIRAPP58753 221 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
RNF43-205ENST00000581868 LRRK2Q5S007 2527 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 ABCA12Q86UK0 2595 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 WNK1Q9H4A3 2382 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 GAGE2EQ4V326 116 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 GAGE2DQ9UEU5 116 aa9.85□□□□□ -0.83
RNF43-205ENST00000581868 TIMM17BO60830 172 aa9.84□□□□□ -0.83
RNF43-205ENST00000581868 IFITM1P13164 125 aa9.84□□□□□ -0.83
RNF43-205ENST00000581868 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
RNF43-205ENST00000581868 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
RNF43-205ENST00000581868 LST1O00453 97 aa9.84□□□□□ -0.83
RNF43-205ENST00000581868 STHQ8IWL8 128 aa9.84□□□□□ -0.83
RNF43-205ENST00000581868 NAV2Q8IVL1 2488 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 IGLV5-45A0A087WSX0 123 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 A0A1W2PRX2 142 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 PRB1P04280 392 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 KRTAP10-9P60411 292 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 LINC00308Q8TCZ7 52 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 CITED2Q99967 270 aaPredicted RBP9.83□□□□□ -0.84
RNF43-205ENST00000581868 ZFYVE26Q68DK2 2539 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 C1orf158Q8N1D5 194 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 C15orf53Q8NAA6 179 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 C2CD3Q4AC94 2353 aa9.83□□□□□ -0.84
RNF43-205ENST00000581868 H3BT86 120 aa9.82□□□□□ -0.84
RNF43-205ENST00000581868 HERVK_113P63121 156 aa9.82□□□□□ -0.84
RNF43-205ENST00000581868 LINC01600Q96MT4 127 aa9.82□□□□□ -0.84
RNF43-205ENST00000581868 EPG5Q9HCE0 2579 aa9.82□□□□□ -0.84
RNF43-205ENST00000581868 Q6ZTI0 123 aa9.82□□□□□ -0.84
RNF43-205ENST00000581868 Q8N2B8 174 aa9.82□□□□□ -0.84
RNF43-205ENST00000581868 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
RNF43-205ENST00000581868 RPL36AP83881 106 aaKnown RBP9.81□□□□□ -0.84
RNF43-205ENST00000581868 GAGE4Q13068 117 aa9.81□□□□□ -0.84
RNF43-205ENST00000581868 GAGE5Q13069 117 aa9.81□□□□□ -0.84
RNF43-205ENST00000581868 MEIG1Q5JSS6 88 aa9.81□□□□□ -0.84
RNF43-205ENST00000581868 NTM-AS1Q6ZSK4 140 aa9.81□□□□□ -0.84
RNF43-205ENST00000581868 RPL36ALQ969Q0 106 aaKnown RBP9.81□□□□□ -0.84
RNF43-205ENST00000581868 ZNF462Q96JM2 2506 aa9.8□□□□□ -0.84
RNF43-205ENST00000581868 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
RNF43-205ENST00000581868 TTC32Q5I0X7 151 aa9.8□□□□□ -0.84
RNF43-205ENST00000581868 PRIMA1Q86XR5 153 aa9.8□□□□□ -0.84
RNF43-205ENST00000581868 CR1P17927 2039 aa9.8□□□□□ -0.84
RNF43-205ENST00000581868 SMIM1B2RUZ4 78 aa9.8□□□□□ -0.84
RNF43-205ENST00000581868 SONP18583 2426 aaKnown RBP9.79□□□□□ -0.84
RNF43-205ENST00000581868 K7EQD1 137 aa9.79□□□□□ -0.84
RNF43-205ENST00000581868 SOSTDC1Q6X4U4 206 aa9.79□□□□□ -0.84
RNF43-205ENST00000581868 NHLRC4P0CG21 123 aaPredicted RBP9.78□□□□□ -0.84
RNF43-205ENST00000581868 NDUFV3P56181 108 aaKnown RBP9.78□□□□□ -0.84
RNF43-205ENST00000581868 Q96MF0 132 aa9.78□□□□□ -0.84
RNF43-205ENST00000581868 NF1P21359 2839 aa9.78□□□□□ -0.84
RNF43-205ENST00000581868 NIPBLQ6KC79 2804 aaeCLIP9.77□□□□□ -0.84
RNF43-205ENST00000581868 NOP10Q9NPE3 64 aaKnown RBP9.77□□□□□ -0.85
RNF43-205ENST00000581868 SETD2Q9BYW2 2564 aaPredicted RBP9.76□□□□□ -0.85
RNF43-205ENST00000581868 DAZ2Q13117 558 aaKnown RBP9.76□□□□□ -0.85
RNF43-205ENST00000581868 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
RNF43-205ENST00000581868 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
RNF43-205ENST00000581868 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
RNF43-205ENST00000581868 IL17DQ8TAD2 202 aa9.76□□□□□ -0.85
RNF43-205ENST00000581868 UBE2L6O14933 153 aa9.75□□□□□ -0.85
RNF43-205ENST00000581868 IGKV3OR2-268A0A0C4DH90 116 aa9.75□□□□□ -0.85
RNF43-205ENST00000581868 TRBV10-1A0A0K0K1A3 114 aa9.75□□□□□ -0.85
RNF43-205ENST00000581868 B5MCH6 92 aa9.75□□□□□ -0.85
RNF43-205ENST00000581868 DEFB113Q30KQ7 82 aa9.75□□□□□ -0.85
RNF43-205ENST00000581868 JMJD1CQ15652 2540 aa9.75□□□□□ -0.85
RNF43-205ENST00000581868 F5H768 121 aa9.74□□□□□ -0.85
RNF43-205ENST00000581868 COX7A2LO14548 114 aa9.74□□□□□ -0.85
RNF43-205ENST00000581868 GAGE6Q13070 117 aa9.74□□□□□ -0.85
RNF43-205ENST00000581868 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
RNF43-205ENST00000581868 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
RNF43-205ENST00000581868 CCL24O00175 119 aa9.74□□□□□ -0.85
RNF43-205ENST00000581868 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
RNF43-205ENST00000581868 ZNF469Q96JG9 3925 aaPredicted RBP9.74□□□□□ -0.85
RNF43-205ENST00000581868 GAGE7O76087 117 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 GAGE12FP0CL80 117 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 GAGE12GP0CL81 117 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 GAGE12IP0CL82 117 aa9.73□□□□□ -0.85
RNF43-205ENST00000581868 AKAP9Q99996 3911 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms