RNA–Protein interactions for RNA: ENST00000581711.1

SMCHD1-207, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 4

Gene SMCHD1, Length 546 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-207ENST00000581711 TRAV1-2A0A0B4J238 106 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 APOC4-APOC2K7ER74 178 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 SNCGO76070 127 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 IL5P05113 134 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 SMIM6P0DI80 62 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 CBLN1P23435 193 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 GUCA1AP43080 201 aaPredicted RBP-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 UBE2D1P51668 147 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 SMIM21Q3B7S5 101 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 SSBP3-AS1Q7Z2R9 100 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 SPTSSBQ8NFR3 76 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 TSTD1Q8NFU3 115 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 MAFIPQ8WZ33 124 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 SPTSSAQ969W0 71 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 WFDC6Q9BQY6 131 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 COPZ2Q9P299 210 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 HECTD4Q9Y4D8 3996 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 KDM5AP29375 1690 aaKnown RBP-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 FHAD1B1AJZ9 1412 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 FRYLO94915 3013 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 PLCE1Q9P212 2302 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 LRRC37A3O60309 1634 aa-0.05□□□□□ -2.42
SMCHD1-207ENST00000581711 PLXNB2O15031 1838 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 DCHS2Q6V1P9 2916 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 LYSTQ99698 3801 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 SPTA1P02549 2419 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 LOC400499M0QZD8 3231 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 A0A0D9SFI3 127 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 TRBV10-3A0A0K0K1G6 114 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 FAM92AA1XBS5 289 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 CLPSL1A2RUU4 121 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 ZNF815PA8K554 130 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 C10orf142B7Z368 130 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 G3V318 75 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 NPFFO15130 113 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 PIN1P1O15428 100 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 NDUFB6O95139 128 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 CFDP00746 253 aaPredicted RBP-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 SPINK8P0C7L1 97 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 Q5VV11 94 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 ZNF818PQ6ZRF7 136 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 BAGE3Q86Y29 109 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 KCNRGQ8N5I3 272 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 ANP32BQ92688 251 aaKnown RBP-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 TCEAL4Q96EI5 215 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 CNFNQ9BYD5 112 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 CYP4F30PQ9H0H9 118 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 TPT1P8Q9HAU6 139 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 PTPRQQ9UMZ3 2332 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 CFAP54Q96N23 3096 aa-0.06□□□□□ -2.42
SMCHD1-207ENST00000581711 APC2O95996 2303 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 ZMYM4Q5VZL5 1548 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 DOCK2Q92608 1830 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 COPZ1P61923 177 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 RPS25P62851 125 aaKnown RBP-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 CCL8P80075 99 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 ALX1Q15699 326 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 S100A7L2Q5SY68 101 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 PRO0255Q9UI72 69 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 LINC00312Q9Y6C7 94 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 BIVM-ERCC5R4GMW8 1640 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 AKAP6Q13023 2319 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 KDM3BQ7LBC6 1761 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 PI4KAP42356 2102 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 PKDREJQ9NTG1 2253 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 PRDM2Q13029 1718 aa-0.07□□□□□ -2.42
SMCHD1-207ENST00000581711 PATJQ8NI35 1801 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 NHSL1Q5SYE7 1610 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 HSPG2P98160 4391 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 MYH7P12883 1935 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 SMCO1Q147U7 214 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 CFAP126Q5VTH2 177 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 SDF2Q99470 211 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 PFDN5Q99471 154 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 SEC11CQ9BY50 192 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 TMEM191AQ9H0A3 160 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 DOCK1Q14185 1865 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 ADGRG4Q8IZF6 3080 aa-0.08□□□□□ -2.42
SMCHD1-207ENST00000581711 ZNF518AQ6AHZ1 1483 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 IFT140Q96RY7 1462 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 ZNF609O15014 1411 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 CASKIN1Q8WXD9 1431 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 PIGBOS1A0A0B4J2F0 54 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 LOC105371267A0A1B0GV96 52 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 M0R3E3 92 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 COPS9Q8WXC6 57 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 DPH3Q96FX2 82 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 NPVFQ9HCQ7 196 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 SCN3BQ9NY72 215 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 CCDC167Q9P0B6 97 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 R4GMQ9 66 aa-0.09□□□□□ -2.42
SMCHD1-207ENST00000581711 PXDNQ92626 1479 aa-0.1□□□□□ -2.42
SMCHD1-207ENST00000581711 CENPEQ02224 2701 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 MYOM3Q5VTT5 1437 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 CSMD3Q7Z407 3707 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 TNXBP22105 4242 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 TRAV22A0A0B4J277 110 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 SIX6O95475 246 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 PPP1R17O96001 155 aa-0.1□□□□□ -2.43
SMCHD1-207ENST00000581711 CCL18P55774 89 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms