RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 ZFHX3Q15911 3703 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 HUWE1Q7Z6Z7 4374 aaKnown RBP0□□□□□ -2.41
TTC39C-207ENST00000581394 LRP6O75581 1613 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 PZPP20742 1482 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 MYH9P35579 1960 aaKnown RBP0□□□□□ -2.41
TTC39C-207ENST00000581394 GNG4P50150 75 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 ARHGEF5Q12774 1597 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 CUL7Q14999 1698 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 SMG6Q86US8 1419 aaKnown RBP0□□□□□ -2.41
TTC39C-207ENST00000581394 BAGE2Q86Y30 109 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 FAM213BQ8TBF2 198 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 AHCTF1Q8WYP5 2266 aa0□□□□□ -2.41
TTC39C-207ENST00000581394 CHD9Q3L8U1 2897 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 NSD3Q9BZ95 1437 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 TRAV22A0A0B4J277 110 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 UBE2L5PA0A1B0GUS4 154 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 SPINK1P00995 79 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 SMIM6P0DI80 62 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 UBE2L3P68036 154 aaKnown RBP-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 MYOZ3Q8TDC0 251 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 SMIM4Q8WVI0 70 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 SPRR4Q96PI1 79 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 NPVFQ9HCQ7 196 aa-0.01□□□□□ -2.41
TTC39C-207ENST00000581394 CACNA1AO00555 2505 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 AKAP6Q13023 2319 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 UBR5O95071 2799 aaPredicted RBP-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 A0A0D9SFI3 127 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 CHKB-CPT1BH3BT56 60 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 UQCR11O14957 56 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 PPP3R1P63098 170 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 HAMPP81172 84 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 TMEM203Q969S6 136 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 PRO0255Q9UI72 69 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 GNG8Q9UK08 70 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 LPAP08519 4548 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 MYOM1P52179 1685 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 BIVM-ERCC5R4GMW8 1640 aa-0.02□□□□□ -2.41
TTC39C-207ENST00000581394 HMGXB3Q12766 1538 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 FAT2Q9NYQ8 4349 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 SCAPERQ9BY12 1400 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 PTPRQQ9UMZ3 2332 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 ZNF292O60281 2723 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 S100A1P23297 94 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 UBE2D3P61077 147 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 UBE2D2P62837 147 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 TMEM170BQ5T4T1 132 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 Q6JHZ5 121 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 FAM167A-AS1Q96KT0 104 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 U3KQA8 63 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 KMT2AQ03164 3969 aa-0.03□□□□□ -2.41
TTC39C-207ENST00000581394 LRRC37A2A6NM11 1700 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 KIF21AQ7Z4S6 1674 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 WNK2Q9Y3S1 2297 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 SFT2D2O95562 160 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 IFITM1P13164 125 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 COX17Q14061 63 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 KDM3BQ7LBC6 1761 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 WDR7Q9Y4E6 1490 aa-0.04□□□□□ -2.42
TTC39C-207ENST00000581394 MYH8P13535 1937 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 PLXNB2O15031 1838 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 LOC285095A0A1B0GVY8 99 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 FAM24AA6NFZ4 105 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 IGLC1P0CG04 106 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 ATP5EP56381 51 aaPredicted RBP-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 GNG11P61952 73 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 DCDP81605 110 aaKnown RBP-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 Q0VG73 95 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 SPRR2GQ9BYE4 73 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 TNXBP22105 4242 aa-0.05□□□□□ -2.42
TTC39C-207ENST00000581394 MYCBP2O75592 4640 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 COL7A1Q02388 2944 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 ABCA2Q9BZC7 2435 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 HSD52Q0P140 79 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 FAM223AQ8IWN6 122 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 C14orf144Q96I85 54 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 TP53AIP1Q9HCN2 124 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 NXT2Q9NPJ8 142 aaKnown RBP-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 CHD6Q8TD26 2715 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 TET3O43151 1660 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 ABCC5O15440 1437 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 DOCK2Q92608 1830 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 NCOR1O75376 2440 aa-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 EIF4G3O43432 1585 aaKnown RBP-0.06□□□□□ -2.42
TTC39C-207ENST00000581394 EHBP1L1Q8N3D4 1523 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 GVINP1Q7Z2Y8 2422 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 PSME4Q14997 1843 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 WFDC2Q14508 124 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 Q8IZM0 81 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 SVBPQ8N300 66 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 PLCE1Q9P212 2302 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 HSPG2P98160 4391 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 ERCC6L2Q5T890 1561 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 NRKQ7Z2Y5 1582 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 MUC12Q9UKN1 5478 aa-0.07□□□□□ -2.42
TTC39C-207ENST00000581394 MAPKBP1O60336 1514 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 ARHGAP5Q13017 1502 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 COL4A6Q14031 1691 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 ADGRL2O95490 1459 aa-0.08□□□□□ -2.42
TTC39C-207ENST00000581394 H3BQ15 152 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms