RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 TMEM262E9PQX1 116 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BKO60814 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BJP06899 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BOP23527 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BBP33778 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BDP58876 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BCP62807 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 MRPS36P82909 103 aaKnown RBP7.03□□□□□ -1.28
CCDC47-203ENST00000580986 GAGE6Q13070 117 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST2H2BEQ16778 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.03□□□□□ -1.28
CCDC47-203ENST00000580986 AMMECR1LQ6DCA0 310 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BHQ93079 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BNQ99877 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 HIST1H2BMQ99879 126 aa7.03□□□□□ -1.28
CCDC47-203ENST00000580986 KMT2CQ8NEZ4 4911 aaKnown RBP7.02□□□□□ -1.29
CCDC47-203ENST00000580986 TRAV8-3A0A0A6YYJ7 113 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 C1orf196B1AJZ1 125 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 COA6Q5JTJ3 125 aaKnown RBP7.02□□□□□ -1.29
CCDC47-203ENST00000580986 C2orf66Q6UXQ4 117 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 OR5A1Q8NGJ0 315 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 DEFB104AQ8WTQ1 72 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 TMEM101Q96IK0 257 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 TIMM17AQ99595 171 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 KRTAP1-5Q9BYS1 174 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 KMT2AQ03164 3969 aa7.02□□□□□ -1.29
CCDC47-203ENST00000580986 IGLV4-60A0A075B6I1 120 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 CCL25O15444 150 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 IGHV3-30P01768 117 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 IGHV3-33P01772 117 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 HBDP02042 147 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 ANGP03950 147 aaKnown RBP7.01□□□□□ -1.29
CCDC47-203ENST00000580986 IGHV3-30-3P0DP02 117 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 IGHV3-30-5P0DP03 117 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 RPL39P62891 51 aaKnown RBP7.01□□□□□ -1.29
CCDC47-203ENST00000580986 MIAQ16674 131 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 ERASQ7Z444 233 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 NFE4Q86UQ8 179 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 Q8N976 141 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 CDC42SE2Q9NRR3 84 aa7.01□□□□□ -1.29
CCDC47-203ENST00000580986 A0A096LNJ9 63 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 TRAV8-4A0A0B4J246 113 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 IGIPA6NJ69 53 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 HSBP1O75506 76 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 PAPPA-AS1Q5QFB9 102 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 DGAT2L7PQ6IED9 249 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 RNASEKQ6P5S7 137 aaKnown RBP7□□□□□ -1.29
CCDC47-203ENST00000580986 ZNF664Q8N3J9 261 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 KRTAP4-2Q9BYR5 136 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 KLK12Q9UKR0 248 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 COX11Q9Y6N1 276 aa7□□□□□ -1.29
CCDC47-203ENST00000580986 SERF1AO75920 110 aa6.99□□□□□ -1.29
CCDC47-203ENST00000580986 CRPP02741 224 aa6.99□□□□□ -1.29
CCDC47-203ENST00000580986 LINC00310P59036 64 aa6.99□□□□□ -1.29
CCDC47-203ENST00000580986 REG3AQ06141 175 aa6.99□□□□□ -1.29
CCDC47-203ENST00000580986 RMI2Q96E14 147 aa6.99□□□□□ -1.29
CCDC47-203ENST00000580986 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
CCDC47-203ENST00000580986 IGLV4-3A0A075B6K6 122 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 PDZD11Q5EBL8 140 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 LCE4AQ5TA78 99 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 ENHOQ6UWT2 76 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 LINC00269Q8N2A0 174 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 C6orf223Q8N319 242 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
CCDC47-203ENST00000580986 PACRGQ96M98 296 aaPredicted RBP6.98□□□□□ -1.29
CCDC47-203ENST00000580986 EIF4EBP3O60516 100 aaPredicted RBP6.97□□□□□ -1.29
CCDC47-203ENST00000580986 ATP5LO75964 103 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 C1orf134Q5TEV5 83 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 Q6ZN92 141 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
CCDC47-203ENST00000580986 Q6ZUT4 128 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 UBE2WQ96B02 151 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 SCGB3A1Q96QR1 104 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 AMELXQ99217 191 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 TM2D2Q9BX73 214 aa6.97□□□□□ -1.29
CCDC47-203ENST00000580986 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.96□□□□□ -1.3
CCDC47-203ENST00000580986 LINC00959A0A1B0GUT2 108 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 M0R2N4 97 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 TEX43Q6ZNM6 134 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 FAM19A3Q7Z5A8 133 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 C2orf88Q9BSF0 95 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 C1orf43Q9BWL3 253 aa6.95□□□□□ -1.3
CCDC47-203ENST00000580986 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.95□□□□□ -1.3
CCDC47-203ENST00000580986 EREGO14944 169 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 SS18Q15532 418 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 PMCHL1Q16048 86 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 KRTAP26-1Q6PEX3 210 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 VCX2Q9H322 139 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 HYDINQ4G0P3 5121 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
CCDC47-203ENST00000580986 IFITM10A6NMD0 228 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 NUPR1O60356 82 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 LEPROTL1O95214 131 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 UBE2D1P51668 147 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 SEC11AP67812 179 aa6.93□□□□□ -1.3
CCDC47-203ENST00000580986 PMVKQ15126 192 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms