RNA–Protein interactions for RNA: ENST00000580904.1

PSMD11-209, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 4

Gene PSMD11, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-209	ENST00000580904	HIST2H2BE	Q16778	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	LELP1	Q5T871	98 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BH	Q93079	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BN	Q99877	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	HIST1H2BM	Q99879	126 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	NXT2	Q9NPJ8	142 aa	Known RBP	4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	LINC00588	Q9Y4M8	146 aa		4.92	□□□□□ -1.62
PSMD11-209	ENST00000580904	LYST	Q99698	3801 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	TRBV25-1	A0A075B6N4	114 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	IGHV1-24	A0A0C4DH33	117 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	LINC01546	A6NGU7	62 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	C1orf196	B1AJZ1	125 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904		K7EMI3	77 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	CCL18	P55774	89 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904		Q0VG73	95 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	NIT1	Q86X76	327 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	CHCHD7	Q9BUK0	85 aa		4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	MRPS16	Q9Y3D3	137 aa	Known RBP	4.91	□□□□□ -1.62
PSMD11-209	ENST00000580904	ALMS1	Q8TCU4	4167 aa		4.9	□□□□□ -1.62
PSMD11-209	ENST00000580904	LINC00614	P0C842	121 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	ESD	P10768	282 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	RAB5B	P61020	215 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	LAGE3	Q14657	143 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	FA2H	Q7L5A8	372 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	BAGE3	Q86Y29	109 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	UPK3B	Q9BT76	320 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	TMEM243	Q9BU79	118 aa		4.9	□□□□□ -1.63
PSMD11-209	ENST00000580904	TRAV8-6	A0A0B4J262	113 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	USP17L23	D6RBM5	183 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	SERF1A	O75920	110 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	ORMDL2	Q53FV1	153 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	RNASEK	Q6P5S7	137 aa	Known RBP	4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	WFDC10B	Q8IUB3	73 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	UBE2DNL	Q8IWF7	75 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	C20orf203	Q8NBC4	194 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	CHCHD1	Q96BP2	118 aa	Known RBP	4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	CHCHD5	Q9BSY4	110 aa		4.89	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.88	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.88	□□□□□ -1.63
PSMD11-209	ENST00000580904		H7C423	109 aa		4.88	□□□□□ -1.63
PSMD11-209	ENST00000580904	RPL39	P62891	51 aa	Known RBP	4.88	□□□□□ -1.63
PSMD11-209	ENST00000580904	GAGE6	Q13070	117 aa		4.88	□□□□□ -1.63
PSMD11-209	ENST00000580904	LGALS9C	Q6DKI2	356 aa		4.88	□□□□□ -1.63
PSMD11-209	ENST00000580904		A0A087WX48	190 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904		A0A096LNJ9	63 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	TMEM262	E9PQX1	116 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	UBE2L6	O14933	153 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	SIVA1	O15304	175 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	NUPR1	O60356	82 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	HSBP1	O75506	76 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	DNAH10OS	P0CZ25	163 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	FGF6	P10767	208 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	G0S2	P27469	103 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	NDUFA6	P56556	154 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	PKIA	P61925	76 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	PMCHL1	Q16048	86 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	MPV17L2	Q567V2	206 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	LINC01556	Q5JQF7	62 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	COA6	Q5JTJ3	125 aa	Known RBP	4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	C2orf66	Q6UXQ4	117 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	MRPL52	Q86TS9	123 aa	Known RBP	4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904		Q9H8V8	135 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	CYSLTR1	Q9Y271	337 aa		4.87	□□□□□ -1.63
PSMD11-209	ENST00000580904	SACS	Q9NZJ4	4579 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	LY6G6C	O95867	125 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGHV3-30	P01768	117 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGHV3-33	P01772	117 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	HBD	P02042	147 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGHV3-30-3	P0DP02	117 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGHV3-30-5	P0DP03	117 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	ZNF25	P17030	456 aa	Predicted RBP	4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	RBX1	P62877	108 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	AMMECR1L	Q6DCA0	310 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904		Q8N976	141 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	TOMM6	Q96B49	74 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	TIMM21	Q9BVV7	248 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	UBE2D4	Q9Y2X8	147 aa		4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	CSDC2	Q9Y534	153 aa	Known RBP	4.86	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGLV4-60	A0A075B6I1	120 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904		A0A1B0GUV1	79 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	LINC01549	A6NIU2	74 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGIP	A6NJ69	53 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	SMAGP	Q0VAQ4	97 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	PDZD11	Q5EBL8	140 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	FAM19A2	Q8N3H0	131 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	OR5A1	Q8NGJ0	315 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	TMEM101	Q96IK0	257 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	SPANXA1	Q9NS26	97 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	PYGO1	Q9Y3Y4	419 aa		4.85	□□□□□ -1.63
PSMD11-209	ENST00000580904	DNAH6	Q9C0G6	4158 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGLV5-37	A0A075B6J1	123 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGLV4-3	A0A075B6K6	122 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	IGLV5-52	A0A0A0MRZ9	124 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	hDV102S1	A0JD36	115 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904		K7EP13	123 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	S100A6	P06703	90 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904		Q6ZUT4	128 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	ERAS	Q7Z444	233 aa		4.84	□□□□□ -1.63
PSMD11-209	ENST00000580904	ZNF664	Q8N3J9	261 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms