RNA–Protein interactions for RNA: ENST00000580044.5

CDH8-206, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-206ENST00000580044 FAM222AQ5U5X8 452 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 DAZ4Q86SG3 579 aaKnown RBP3.83□□□□□ -1.8
CDH8-206ENST00000580044 C15orf53Q8NAA6 179 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 TMEM101Q96IK0 257 aa3.83□□□□□ -1.8
CDH8-206ENST00000580044 DAZ3Q9NR90 486 aaKnown RBP3.83□□□□□ -1.8
CDH8-206ENST00000580044 BEX4Q9NWD9 120 aaPredicted RBP3.83□□□□□ -1.8
CDH8-206ENST00000580044 PRRC2AP48634 2157 aaKnown RBP3.83□□□□□ -1.8
CDH8-206ENST00000580044 PTPRZ1P23471 2315 aaPredicted RBP3.83□□□□□ -1.8
CDH8-206ENST00000580044 DMXL2Q8TDJ6 3036 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 TACC2O95359 2948 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 LRBAP50851 2863 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 TRAV8-3A0A0A6YYJ7 113 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 TRAV4A0A0B4J268 109 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 TRAV25A0A0B4J276 109 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 INAFM2P0DMQ5 153 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 EDN2P20800 178 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 GNLYP22749 145 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 CMC4P56277 68 aaPredicted RBP3.82□□□□□ -1.8
CDH8-206ENST00000580044 DEFB131AP59861 70 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 DEFB112Q30KQ8 113 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 TMEM95Q3KNT9 176 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 C11orf72Q8NBR9 251 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 DYNLRB2Q8TF09 96 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 C4orf3Q8WVX3 66 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 LINC01587Q99440 93 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 SPENQ96T58 3664 aaKnown RBP3.82□□□□□ -1.8
CDH8-206ENST00000580044 GVINP1Q7Z2Y8 2422 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 NACAE9PAV3 2078 aa3.82□□□□□ -1.8
CDH8-206ENST00000580044 DMXL1Q9Y485 3027 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 DCHS2Q6V1P9 2916 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 RBMY1A1P0DJD3 496 aaKnown RBP3.81□□□□□ -1.8
CDH8-206ENST00000580044 RBMY1CP0DJD4 496 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 RPL36AP83881 106 aaKnown RBP3.81□□□□□ -1.8
CDH8-206ENST00000580044 LY6DQ14210 128 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 RBMY1FQ15415 496 aaKnown RBP3.81□□□□□ -1.8
CDH8-206ENST00000580044 ADAMTSL4-AS1Q5T5F5 129 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 Q8N2B8 174 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 DAND5Q8N907 189 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 LINC00308Q8TCZ7 52 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 DEFB104AQ8WTQ1 72 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 ZNF702PQ9H963 129 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 CDKN2A-AS1Q9UH64 79 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 TTC28Q96AY4 2481 aa3.81□□□□□ -1.8
CDH8-206ENST00000580044 ZFHX2Q9C0A1 2572 aaPredicted RBP3.8□□□□□ -1.8
CDH8-206ENST00000580044 MUC3AQ02505 3323 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.8□□□□□ -1.8
CDH8-206ENST00000580044 IGHV3-73A0A0B4J1V6 119 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 TRAV13-2A0A0B4J235 113 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 IGKV2-29A2NJV5 120 aaPredicted RBP3.8□□□□□ -1.8
CDH8-206ENST00000580044 NHLRC4P0CG21 123 aaPredicted RBP3.8□□□□□ -1.8
CDH8-206ENST00000580044 HTN1P15515 57 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 CXCL5P42830 114 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 MEIG1Q5JSS6 88 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 LINC00242Q5T6M2 205 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 LCE1AQ5T7P2 110 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
CDH8-206ENST00000580044 CEMP1Q6PRD7 247 aaPredicted RBP3.8□□□□□ -1.8
CDH8-206ENST00000580044 LINC00643Q86TS7 51 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 TMEM126AQ9H061 195 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 Q9H8V8 135 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 MAP6D1Q9H9H5 199 aa3.8□□□□□ -1.8
CDH8-206ENST00000580044 ADGRG4Q8IZF6 3080 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 RBMY1BA6NDE4 496 aaKnown RBP3.79□□□□□ -1.8
CDH8-206ENST00000580044 RBMY1EA6NEQ0 496 aaKnown RBP3.79□□□□□ -1.8
CDH8-206ENST00000580044 SMIM1B2RUZ4 78 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 K7EQD1 137 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 UBE2L6O14933 153 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 CRLF1O75462 422 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 RBMY1DP0C7P1 496 aaKnown RBP3.79□□□□□ -1.8
CDH8-206ENST00000580044 RNASE13Q5GAN3 156 aaKnown RBP3.79□□□□□ -1.8
CDH8-206ENST00000580044 TMEM86BQ8N661 226 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 CLEC2BQ92478 149 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 ZNF625Q96I27 306 aaPredicted RBP3.79□□□□□ -1.8
CDH8-206ENST00000580044 CITED2Q99967 270 aaPredicted RBP3.79□□□□□ -1.8
CDH8-206ENST00000580044 ATMQ13315 3056 aa3.79□□□□□ -1.8
CDH8-206ENST00000580044 RIF1Q5UIP0 2472 aaKnown RBP3.78□□□□□ -1.8
CDH8-206ENST00000580044 HIVEP3Q5T1R4 2406 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 MUC6Q6W4X9 2439 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 IGHV3OR16-12A0A075B7B8 117 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 A0A096LNT2 108 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 CRPP02741 224 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 MALP21145 153 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 RPL28P46779 137 aaKnown RBP3.78□□□□□ -1.8
CDH8-206ENST00000580044 NPC2P61916 151 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 DEFB114Q30KQ6 69 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 HIST2H2BCQ6DN03 193 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 HIST2H2BDQ6DRA6 164 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 C10orf99Q6UWK7 81 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 STHQ8IWL8 128 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 TMEM243Q9BU79 118 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 SS18L2Q9UHA2 77 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 SPTBN1Q01082 2364 aaKnown RBP3.78□□□□□ -1.8
CDH8-206ENST00000580044 DOPEY2Q9Y3R5 2298 aa3.78□□□□□ -1.8
CDH8-206ENST00000580044 CEP295Q9C0D2 2601 aa3.77□□□□□ -1.81
CDH8-206ENST00000580044 TRGV1A0A0A0MS02 117 aa3.77□□□□□ -1.81
CDH8-206ENST00000580044 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
CDH8-206ENST00000580044 TRBV6-4A0A1B0GX49 114 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms