RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 CTSGP08311 255 aa5.11□□□□□ -1.59
KRT39-203ENST00000578078 IGHV4-38-2P0DP08 117 aa5.11□□□□□ -1.59
KRT39-203ENST00000578078 SYNJ2BPP57105 145 aa5.11□□□□□ -1.59
KRT39-203ENST00000578078 TSPEAR-AS2P59090 65 aa5.11□□□□□ -1.59
KRT39-203ENST00000578078 RHOHQ15669 191 aa5.11□□□□□ -1.59
KRT39-203ENST00000578078 TP53TG1Q9Y2A0 90 aa5.11□□□□□ -1.59
KRT39-203ENST00000578078 UTP20O75691 2785 aaKnown RBP5.11□□□□□ -1.59
KRT39-203ENST00000578078 IGKV2-40A0A087WW87 121 aaPredicted RBP5.1□□□□□ -1.59
KRT39-203ENST00000578078 TRAV41A0A0B4J266 112 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 IGHV4-28A0A0C4DH34 117 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 FAM236DA0A1B0GTK5 79 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 FAM223BA6NKX1 122 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 G3V318 75 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 IGKV2D-40P01614 121 aaPredicted RBP5.1□□□□□ -1.59
KRT39-203ENST00000578078 IGHG2P01859 326 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 TRGV3P03979 118 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 FAM236CP0DP71 79 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 NSUN5P1Q3KNT7 163 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 FAM223AQ8IWN6 122 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 C14orf178Q8N769 122 aaPredicted RBP5.1□□□□□ -1.59
KRT39-203ENST00000578078 IL17DQ8TAD2 202 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 DSCR8Q96T75 97 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 LITAFQ99732 161 aa5.1□□□□□ -1.59
KRT39-203ENST00000578078 MED13LQ71F56 2210 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 ABCA1O95477 2261 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 TRBV27A0A0K0K1C4 114 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 H3BUX3 64 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 I3L3M4 83 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 NXPH4O95158 308 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 TSHBP01222 138 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 POLR2KP53803 58 aaKnown RBP5.09□□□□□ -1.59
KRT39-203ENST00000578078 CRYBG3Q68DQ2 2970 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 C9orf47Q6ZRZ4 202 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 LINC00336Q6ZUF6 198 aa5.09□□□□□ -1.59
KRT39-203ENST00000578078 ANKRD17O75179 2603 aaKnown RBP5.09□□□□□ -1.59
KRT39-203ENST00000578078 SPTAN1Q13813 2472 aaKnown RBP5.09□□□□□ -1.59
KRT39-203ENST00000578078 A6NDX4 124 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 H3BUA1 57 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 NDUFC1O43677 76 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 LY6EQ16553 131 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 CLEC19AQ6UXS0 136 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 RNF182Q8N6D2 247 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 LINC00477Q96M19 166 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 ZNF462Q96JM2 2506 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 IGHV4-31P0DP07 118 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 DAZ2Q13117 558 aaKnown RBP5.08□□□□□ -1.6
KRT39-203ENST00000578078 C1orf195Q5TG92 126 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 DAZ4Q86SG3 579 aaKnown RBP5.08□□□□□ -1.6
KRT39-203ENST00000578078 APRG1Q8IVJ8 170 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 C1orf158Q8N1D5 194 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 DAZ1Q9NQZ3 744 aaKnown RBP5.08□□□□□ -1.6
KRT39-203ENST00000578078 DAZ3Q9NR90 486 aaKnown RBP5.08□□□□□ -1.6
KRT39-203ENST00000578078 CELSR2Q9HCU4 2923 aa5.08□□□□□ -1.6
KRT39-203ENST00000578078 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.08□□□□□ -1.6
KRT39-203ENST00000578078 FAM208BQ5VWN6 2430 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 TRAV26-2A0A0B4J265 109 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 IGHV3-35A0A0C4DH35 117 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 KNCNA6PVL3 124 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 H7C2G1 150 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 DNAL4O96015 105 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 RPL35AP18077 110 aaKnown RBP5.07□□□□□ -1.6
KRT39-203ENST00000578078 GPHB5Q86YW7 130 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 Q8TAT8 98 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 USMG5Q96IX5 58 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 OBSCN-AS1Q96MR7 158 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 KLK15Q9H2R5 256 aa5.07□□□□□ -1.6
KRT39-203ENST00000578078 VPS13CQ709C8 3753 aa5.06□□□□□ -1.6
KRT39-203ENST00000578078 TRAV8-3A0A0A6YYJ7 113 aa5.06□□□□□ -1.6
KRT39-203ENST00000578078 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
KRT39-203ENST00000578078 Q6YL49 198 aa5.06□□□□□ -1.6
KRT39-203ENST00000578078 ZFYVE26Q68DK2 2539 aa5.06□□□□□ -1.6
KRT39-203ENST00000578078 CR1P17927 2039 aa5.06□□□□□ -1.6
KRT39-203ENST00000578078 IGHV3OR16-8A0A075B7F1 116 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 A0A096LNT2 108 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 TRAV21A0A0B4J279 112 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 IGHV1-58A0A0C4DH39 117 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 RNASE4P34096 147 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 DEFB113Q30KQ7 82 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 CLEC2BQ92478 149 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 TMEM243Q9BU79 118 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 C16orf95Q9H693 158 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 ZNF580Q9UK33 172 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 UBE2D4Q9Y2X8 147 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 CELSR1Q9NYQ6 3014 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 CLPSL1A2RUU4 121 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 RBMY1BA6NDE4 496 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 RBMY1EA6NEQ0 496 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 RBMY1DP0C7P1 496 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 RBMY1A1P0DJD3 496 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 RBMY1CP0DJD4 496 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 IGHV3-30-3P0DP02 117 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 IGHV4-30-4P0DP06 118 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 CIRBPQ14011 172 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 RBMY1FQ15415 496 aaKnown RBP5.05□□□□□ -1.6
KRT39-203ENST00000578078 DEFB112Q30KQ8 113 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 PRR26Q8N8Z3 221 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 SPG11Q96JI7 2443 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 CYSTM1Q9H1C7 97 aa5.05□□□□□ -1.6
KRT39-203ENST00000578078 C11orf21Q9P2W6 132 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms