RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 NUMA1Q14980 2115 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 FLNCQ14315 2725 aa2.99□□□□□ -1.93
KRT39-202ENST00000578029 ANAPC1Q9H1A4 1944 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 IGKV2D-26A0A0A0MRZ7 120 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.98□□□□□ -1.93
KRT39-202ENST00000578029 TRAV13-2A0A0B4J235 113 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 TRBV30A0A0K0K1B3 111 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 IQCF6A8MYZ5 107 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 C4orf51C9J302 202 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 IGKV1-39P01597 117 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 IGKV1D-39P04432 117 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 CMC4P56277 68 aaPredicted RBP2.98□□□□□ -1.93
KRT39-202ENST00000578029 MP68P56378 58 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 KRTAP10-6P60371 365 aaPredicted RBP2.98□□□□□ -1.93
KRT39-202ENST00000578029 Q1T7F1 81 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 FAM19A3Q7Z5A8 133 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 RNF5Q99942 180 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 NABP2Q9BQ15 211 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 PSENENQ9NZ42 101 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 MRPL35Q9NZE8 188 aaKnown RBP2.98□□□□□ -1.93
KRT39-202ENST00000578029 TAC3Q9UHF0 121 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 COL27A1Q8IZC6 1860 aaPredicted RBP2.98□□□□□ -1.93
KRT39-202ENST00000578029 DOCK4Q8N1I0 1966 aa2.98□□□□□ -1.93
KRT39-202ENST00000578029 NOTCH3Q9UM47 2321 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 HMGN4O00479 90 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 COX7A2LO14548 114 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 HMGN2P05204 90 aaKnown RBP2.97□□□□□ -1.93
KRT39-202ENST00000578029 INAFM2P0DMQ5 153 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 ZNF22P17026 224 aaPredicted RBP2.97□□□□□ -1.93
KRT39-202ENST00000578029 ESRGQ1W209 222 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 LINC01590Q5TEZ4 76 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 ATP11AUNQ6ZP68 121 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 C16orf47Q6ZP98 133 aaPredicted RBP2.97□□□□□ -1.93
KRT39-202ENST00000578029 C7orf65Q6ZTY9 151 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 FAM223AQ8IWN6 122 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 DIRC1Q969H9 104 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 WFDC6Q9BQY6 131 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 SND1-IT1Q9HBX3 110 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 TMEM167BQ9NRX6 74 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 LINC00474Q9P2X8 69 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 F8P00451 2351 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 PTPRDP23468 1912 aa2.97□□□□□ -1.93
KRT39-202ENST00000578029 CACNA1EQ15878 2313 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 NF1P21359 2839 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 TRAV7A0A075B6U4 112 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 IGKV1D-43A0A0B4J1Z2 117 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 TRBV10-3A0A0K0K1G6 114 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 LINC01546A6NGU7 62 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 E7EQL1 145 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 FSTL3O95633 263 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 COX6CP09669 75 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 CCL4P13236 92 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 BLCAPP62952 87 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 RHOHQ15669 191 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 LINC00483Q53H64 154 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 S100A7L2Q5SY68 101 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 ATP5EP2Q5VTU8 51 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 WFDC5Q8TCV5 224 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 SMCR5Q8TEV8 140 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 DYNLRB2Q8TF09 96 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 CYYR1Q96J86 154 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 TTTY10Q9BZA0 68 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 Q9Y3F1 56 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 LHFPL6Q9Y693 200 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 TRPM6Q9BX84 2022 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 KIAA2026Q5HYC2 2103 aa2.96□□□□□ -1.94
KRT39-202ENST00000578029 LCTP09848 1927 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 PLXNB3Q9ULL4 1909 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 LRBAP50851 2863 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 FAM223BA6NKX1 122 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 HIGD1CA8MV81 97 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 PIRTP0C851 137 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 PLNP26678 52 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 FUSP35637 526 aaKnown RBP eCLIP2.95□□□□□ -1.94
KRT39-202ENST00000578029 LINC00313P59037 77 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 DEFB103AP81534 67 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 CIRBPQ14011 172 aaKnown RBP2.95□□□□□ -1.94
KRT39-202ENST00000578029 FXYD3Q14802 87 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 PLGLAQ15195 96 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 MRPL51Q4U2R6 128 aaKnown RBP2.95□□□□□ -1.94
KRT39-202ENST00000578029 ZNF818PQ6ZRF7 136 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 VMO1Q7Z5L0 202 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 GPHB5Q86YW7 130 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 C20orf197Q8N268 126 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 NPCDR1Q9BY65 106 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 PROK2Q9HC23 129 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 KLK12Q9UKR0 248 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 UBE2D4Q9Y2X8 147 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 ZNF706Q9Y5V0 76 aaPredicted RBP2.95□□□□□ -1.94
KRT39-202ENST00000578029 MGAQ8IWI9 3026 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 SNRNP200O75643 2136 aaKnown RBP2.95□□□□□ -1.94
KRT39-202ENST00000578029 F5P12259 2224 aa2.95□□□□□ -1.94
KRT39-202ENST00000578029 NCOA6Q14686 2063 aaPredicted RBP2.94□□□□□ -1.94
KRT39-202ENST00000578029 CENPEQ02224 2701 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 IGLV3-32A0A0A0MS00 114 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 TMEM30CPA0ZSE6 113 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 BUB1B-PAK6H3BSN5 160 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 IGKV1-5P01602 117 aa2.94□□□□□ -1.94
KRT39-202ENST00000578029 CD28P10747 220 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms