RNA–Protein interactions for RNA: ENST00000577978.1

DDX42-205, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 581 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-205ENST00000577978 ERCC8Q13216 396 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 ZNF56Q15929 161 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 TMEM155Q4W5P6 130 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 Q5XG85 94 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 SCGB1D4Q6XE38 83 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 EXOC3-AS1Q8N2X6 119 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.64□□□□□ -1.99
DDX42-205ENST00000577978 C8orf31Q8N9H6 132 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 PLEKHB2Q96CS7 222 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 METTL26Q96S19 204 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 SHANK2-AS3Q9BTD1 123 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 MRPL36Q9P0J6 103 aaKnown RBP2.64□□□□□ -1.99
DDX42-205ENST00000577978 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
DDX42-205ENST00000577978 IGLV7-46A0A075B6I9 117 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 IGKV1D-17A0A075B6S4 117 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 SDHAF1A6NFY7 115 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 M0R381 172 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 LST1O00453 97 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 IGLV2-23P01705 113 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 COX6A1P12074 109 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 GATA1P15976 413 aaPredicted RBP2.63□□□□□ -1.99
DDX42-205ENST00000577978 PSMB8P28062 276 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 C2orf82Q6UX34 121 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 MDP1Q86V88 176 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 LINC00311Q8N616 119 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 FAM216BQ8N7L0 139 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 KLF14Q8TD94 323 aaPredicted RBP2.63□□□□□ -1.99
DDX42-205ENST00000577978 PRAC1Q96KF2 57 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 SCGB3A1Q96QR1 104 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 AMELXQ99217 191 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 SLC50A1Q9BRV3 221 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 SMIM2Q9BVW6 85 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 EDA2RQ9HAV5 297 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 RPUSD1Q9UJJ7 312 aaKnown RBP2.63□□□□□ -1.99
DDX42-205ENST00000577978 FREM1Q5H8C1 2179 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 CR1P17927 2039 aa2.63□□□□□ -1.99
DDX42-205ENST00000577978 IGLV4-69A0A075B6H9 119 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 IGLV9-49A0A0B4J1Y8 123 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 TMEM223A0PJW6 202 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 E7EUB6 86 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 SCRG1O75711 98 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 PPP1R17O96001 155 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 LHBP01229 141 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 IGKV1-16P04430 117 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 COX6CP09669 75 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 CCL8P80075 99 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 VMA21Q3ZAQ7 101 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 ZNF826PQ6ZT77 177 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 DAND5Q8N907 189 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 DCANP1Q8TF63 244 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 TMEM141Q96I45 108 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 UPK3BQ9BT76 320 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 DYNLRB1Q9NP97 96 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 LINC00527Q9UJ94 153 aa2.62□□□□□ -1.99
DDX42-205ENST00000577978 ZNF256Q9Y2P7 627 aaPredicted RBP2.62□□□□□ -1.99
DDX42-205ENST00000577978 CSMD3Q7Z407 3707 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 LY6LH3BQJ8 138 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 H3BTX0 84 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 I3L2K1 104 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 J3QQQ9 107 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 LEPROTO15243 131 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 NDUFC2O95298 119 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 OXTP01178 125 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 IGHV3-9P01782 118 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 LYZP61626 148 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 RPL18AQ02543 176 aaKnown RBP2.61□□□□□ -1.99
DDX42-205ENST00000577978 C4orf26Q17RF5 130 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 FAM222AQ5U5X8 452 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 CEMP1Q6PRD7 247 aaPredicted RBP2.61□□□□□ -1.99
DDX42-205ENST00000577978 SFTA2Q6UW10 78 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 SERP2Q8N6R1 65 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 JPT2Q9H910 190 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 KLK5Q9Y337 293 aaPredicted RBP2.61□□□□□ -1.99
DDX42-205ENST00000577978 ICOSQ9Y6W8 199 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 MED12Q93074 2177 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 DSCAML1Q8TD84 2053 aa2.61□□□□□ -1.99
DDX42-205ENST00000577978 TNCP24821 2201 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 TRBV7-1A0A0A6YYK4 115 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 TRAV13-1A0A0B4J241 112 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 IGHV7-4-1A0A0J9YVY3 117 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 TINCRA0A1B0GVN0 87 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 hADV29S1A0JD25 119 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 IGIPA6NJ69 53 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 J3QLI3 93 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 M0R3E3 92 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 ATP6V0E1O15342 81 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 RS1O15537 224 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 IGKV1-17P01599 117 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 IGKV3-15P01624 115 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 IGHV1-69P01742 117 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 ZNF22P17026 224 aaPredicted RBP2.6□□□□□ -1.99
DDX42-205ENST00000577978 LGALS3P17931 250 aaKnown RBP2.6□□□□□ -1.99
DDX42-205ENST00000577978 RPL27AP46776 148 aaKnown RBP2.6□□□□□ -1.99
DDX42-205ENST00000577978 ZNF80P51504 273 aaPredicted RBP2.6□□□□□ -1.99
DDX42-205ENST00000577978 TSPEAR-AS2P59090 65 aa2.6□□□□□ -1.99
DDX42-205ENST00000577978 DUX4L9Q6RFH8 374 aaPredicted RBP2.6□□□□□ -1.99
DDX42-205ENST00000577978 IGFL2Q6UWQ7 119 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms