RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 ADCYAP1P18509 176 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 ERCC8Q13216 396 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 RHOHQ15669 191 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 TAL2Q16559 108 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 CD164L2Q6UWJ8 174 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 FAM231DQ6ZW35 169 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 TMEM75Q8N9X5 138 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 FAM19A4Q96LR4 140 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 VAMP8Q9BV40 100 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 SAMD10Q9BYL1 202 aa3.81□□□□□ -1.8
SMG6-219ENST00000575663 A0A1B0GX51 115 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BKO60814 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BJP06899 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 GATA1P15976 413 aaPredicted RBP3.8□□□□□ -1.8
SMG6-219ENST00000575663 NTF3P20783 257 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BOP23527 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BBP33778 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BDP58876 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 UBE2G1P62253 170 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BCP62807 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 RPL23P62829 140 aaKnown RBP3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST2H2BEQ16778 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.8□□□□□ -1.8
SMG6-219ENST00000575663 DAZ4Q86SG3 579 aaKnown RBP3.8□□□□□ -1.8
SMG6-219ENST00000575663 BAGE2Q86Y30 109 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BHQ93079 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 ZC2HC1AQ96GY0 325 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 LINC01600Q96MT4 127 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BNQ99877 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 HIST1H2BMQ99879 126 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 MLST8Q9BVC4 326 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 DAZ3Q9NR90 486 aaKnown RBP3.8□□□□□ -1.8
SMG6-219ENST00000575663 OSTCQ9NRP0 149 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 LPAP08519 4548 aa3.8□□□□□ -1.8
SMG6-219ENST00000575663 TRBV24-1A0A075B6N3 115 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 A0A087WWL8 130 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 IGHV3-16A0A0C4DH30 117 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 TRBV6-4A0A1B0GX49 114 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 SCO2A0A1W2PP80 73 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 A6NDN8 102 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 DIRC3C9JPN6 131 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 M0R2P5 195 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 M0R3E3 92 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 LTAP01374 205 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 RPL13AP40429 203 aaKnown RBP3.79□□□□□ -1.8
SMG6-219ENST00000575663 RPS28P62857 69 aaKnown RBP3.79□□□□□ -1.8
SMG6-219ENST00000575663 MUC21Q5SSG8 566 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 PRR9Q5T870 116 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 ZFAND2AQ8N6M9 145 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 AP1S3Q96PC3 154 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 AGPAT4-IT1Q9H0P7 198 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 ZNF492Q9P255 531 aa3.79□□□□□ -1.8
SMG6-219ENST00000575663 TRBV20OR9-2A0A075B6H5 130 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 IGKV2-40A0A087WW87 121 aaPredicted RBP3.78□□□□□ -1.8
SMG6-219ENST00000575663 IGKV2D-40P01614 121 aaPredicted RBP3.78□□□□□ -1.8
SMG6-219ENST00000575663 ELOBQ15370 118 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 ADIRFQ15847 76 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 CENPWQ5EE01 88 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 COA6Q5JTJ3 125 aaKnown RBP3.78□□□□□ -1.8
SMG6-219ENST00000575663 C1orf195Q5TG92 126 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 Q6AWC8 147 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 RASL11AQ6T310 242 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 FAM19A5Q7Z5A7 132 aaPredicted RBP3.78□□□□□ -1.8
SMG6-219ENST00000575663 Q8N3U1 123 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 STPG4Q8N801 248 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 SLC25A29Q8N8R3 303 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 OR10G8Q8NGN5 311 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 C7orf33Q8WU49 177 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 GFRA4Q9GZZ7 299 aa3.78□□□□□ -1.8
SMG6-219ENST00000575663 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 A8MWL6 223 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 CXCL1P09341 107 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 MGST1P10620 155 aaKnown RBP3.77□□□□□ -1.81
SMG6-219ENST00000575663 ZNF138P52744 262 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 FOXA3P55318 350 aaPredicted RBP3.77□□□□□ -1.81
SMG6-219ENST00000575663 Q0VG73 95 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 REG3GQ6UW15 175 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 Q6ZN92 141 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 Q6ZQT7 251 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 GOLT1AQ6ZVE7 132 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 Q86TA4 180 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 EXOC3-AS1Q8N2X6 119 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 UBE2WQ96B02 151 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 CHCHD7Q9BUK0 85 aa3.77□□□□□ -1.81
SMG6-219ENST00000575663 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.77□□□□□ -1.81
SMG6-219ENST00000575663 C19orf71A6NCJ1 209 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 CRPP02741 224 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 SPINK8P0C7L1 97 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 TRGC1P0CF51 173 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 GNG5P63218 68 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 MRPL54Q6P161 138 aaKnown RBP3.76□□□□□ -1.81
SMG6-219ENST00000575663 ATP5L2Q7Z4Y8 100 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 C9orf163Q8N9P6 203 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 Q8TAT8 98 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 RNF185Q96GF1 192 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 SPANXDQ9BXN6 97 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 IL36BQ9NZH7 164 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 KLK12Q9UKR0 248 aa3.76□□□□□ -1.81
SMG6-219ENST00000575663 IGHV3-73A0A0B4J1V6 119 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms